RNA–Protein interactions for RNA: ENST00000476544.1

RAB5A-208, Transcript of RAB5A, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5A, Length 532 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-208ENST00000476544 DUOX2Q9NRD8 1548 aa20.98■□□□□ 0.95
RAB5A-208ENST00000476544 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.97■□□□□ 0.95
RAB5A-208ENST00000476544 NPATQ14207 1427 aa20.96■□□□□ 0.95
RAB5A-208ENST00000476544 ITGAEP38570 1179 aa20.96■□□□□ 0.95
RAB5A-208ENST00000476544 C3P01024 1663 aa20.96■□□□□ 0.95
RAB5A-208ENST00000476544 ADGRL2O95490 1459 aa20.95■□□□□ 0.94
RAB5A-208ENST00000476544 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.95■□□□□ 0.94
RAB5A-208ENST00000476544 RRBP1Q9P2E9 1410 aaKnown RBP20.93■□□□□ 0.94
RAB5A-208ENST00000476544 UHRF1BP1Q6BDS2 1440 aa20.92■□□□□ 0.94
RAB5A-208ENST00000476544 ERBINQ96RT1 1412 aa20.92■□□□□ 0.94
RAB5A-208ENST00000476544 CLTCQ00610 1675 aaKnown RBP20.9■□□□□ 0.94
RAB5A-208ENST00000476544 MROH1Q8NDA8 1641 aa20.9■□□□□ 0.94
RAB5A-208ENST00000476544 ROCK1Q13464 1354 aa20.89■□□□□ 0.93
RAB5A-208ENST00000476544 ANKRD50Q9ULJ7 1429 aa20.88■□□□□ 0.93
RAB5A-208ENST00000476544 CROCC2H7BZ55 1655 aa20.88■□□□□ 0.93
RAB5A-208ENST00000476544 ABCC3O15438 1527 aa20.88■□□□□ 0.93
RAB5A-208ENST00000476544 KDM5DQ9BY66 1539 aa20.88■□□□□ 0.93
RAB5A-208ENST00000476544 MROH2AA6NES4 1674 aa20.87■□□□□ 0.93
RAB5A-208ENST00000476544 RNF17Q9BXT8 1623 aaKnown RBP20.87■□□□□ 0.93
RAB5A-208ENST00000476544 PZPP20742 1482 aa20.87■□□□□ 0.93
RAB5A-208ENST00000476544 SETD1BQ9UPS6 1966 aaKnown RBP20.86■□□□□ 0.93
RAB5A-208ENST00000476544 TNRQ92752 1358 aa20.85■□□□□ 0.93
RAB5A-208ENST00000476544 FAM135AQ9P2D6 1515 aa20.83■□□□□ 0.93
RAB5A-208ENST00000476544 EIF2AK4Q9P2K8 1649 aaKnown RBP20.83■□□□□ 0.93
RAB5A-208ENST00000476544 NCKAP5LQ9HCH0 1330 aa20.81■□□□□ 0.92
RAB5A-208ENST00000476544 ARHGAP31Q2M1Z3 1444 aa20.8■□□□□ 0.92
RAB5A-208ENST00000476544 PREX1Q8TCU6 1659 aa20.8■□□□□ 0.92
RAB5A-208ENST00000476544 VWDEQ8N2E2 1590 aa20.79■□□□□ 0.92
RAB5A-208ENST00000476544 PRDM15P57071 1507 aaPredicted RBP20.78■□□□□ 0.92
RAB5A-208ENST00000476544 KANK1Q14678 1352 aa20.77■□□□□ 0.92
RAB5A-208ENST00000476544 ERVK-7P63135 1459 aa20.76■□□□□ 0.91
RAB5A-208ENST00000476544 A2ML1A8K2U0 1454 aa20.75■□□□□ 0.91
RAB5A-208ENST00000476544 LMTK2Q8IWU2 1503 aa20.75■□□□□ 0.91
RAB5A-208ENST00000476544 DMRT2Q9Y5R5 561 aa20.75■□□□□ 0.91
RAB5A-208ENST00000476544 DEPDC5O75140 1603 aa20.75■□□□□ 0.91
RAB5A-208ENST00000476544 IDI1Q13907 227 aa20.74■□□□□ 0.91
RAB5A-208ENST00000476544 NAIPQ13075 1403 aa20.73■□□□□ 0.91
RAB5A-208ENST00000476544 THEMISQ8N1K5 641 aaPredicted RBP20.73■□□□□ 0.91
RAB5A-208ENST00000476544 SPATA31D1Q6ZQQ2 1576 aa20.72■□□□□ 0.91
RAB5A-208ENST00000476544 STRCQ7RTU9 1775 aa20.72■□□□□ 0.91
RAB5A-208ENST00000476544 CAMSAP1Q5T5Y3 1602 aa20.71■□□□□ 0.91
RAB5A-208ENST00000476544 PKD2Q13563 968 aa20.71■□□□□ 0.91
RAB5A-208ENST00000476544 NUP155O75694 1391 aa20.71■□□□□ 0.91
RAB5A-208ENST00000476544 PTPRTO14522 1441 aa20.7■□□□□ 0.9
RAB5A-208ENST00000476544 CEP170BQ9Y4F5 1589 aaPredicted RBP20.7■□□□□ 0.9
RAB5A-208ENST00000476544 NOS1P29475 1434 aa20.7■□□□□ 0.9
RAB5A-208ENST00000476544 NLRP1Q9C000 1473 aa20.69■□□□□ 0.9
RAB5A-208ENST00000476544 MYO3AQ8NEV4 1616 aa20.68■□□□□ 0.9
RAB5A-208ENST00000476544 PLA2R1Q13018 1463 aa20.67■□□□□ 0.9
RAB5A-208ENST00000476544 CEP152O94986 1710 aa20.67■□□□□ 0.9
RAB5A-208ENST00000476544 LTKP29376 864 aa20.66■□□□□ 0.9
RAB5A-208ENST00000476544 ANKLE2Q86XL3 938 aa20.66■□□□□ 0.9
RAB5A-208ENST00000476544 ZC3H13Q5T200 1668 aaKnown RBP20.66■□□□□ 0.9
RAB5A-208ENST00000476544 ILDR1Q86SU0 546 aaPredicted RBP20.65■□□□□ 0.9
RAB5A-208ENST00000476544 HFM1A2PYH4 1435 aa20.63■□□□□ 0.89
RAB5A-208ENST00000476544 SLC52A1Q9NWF4 448 aa20.63■□□□□ 0.89
RAB5A-208ENST00000476544 CERKQ8TCT0 537 aa20.62■□□□□ 0.89
RAB5A-208ENST00000476544 UGGT1Q9NYU2 1555 aa20.62■□□□□ 0.89
RAB5A-208ENST00000476544 ZNF142P52746 1687 aaPredicted RBP20.61■□□□□ 0.89
RAB5A-208ENST00000476544 EFCAB6Q5THR3 1501 aa20.61■□□□□ 0.89
RAB5A-208ENST00000476544 UNC13BO14795 1591 aa20.6■□□□□ 0.89
RAB5A-208ENST00000476544 ZNF335Q9H4Z2 1342 aaPredicted RBP20.59■□□□□ 0.89
RAB5A-208ENST00000476544 TXNDC2Q86VQ3 553 aa20.59■□□□□ 0.89
RAB5A-208ENST00000476544 RPRD2Q5VT52 1461 aaKnown RBP20.58■□□□□ 0.89
RAB5A-208ENST00000476544 SYNMO15061 1565 aa20.58■□□□□ 0.88
RAB5A-208ENST00000476544 TRIM52Q96A61 297 aa20.56■□□□□ 0.88
RAB5A-208ENST00000476544 TMEM2Q9UHN6 1383 aa20.56■□□□□ 0.88
RAB5A-208ENST00000476544 CFAP65Q6ZU64 1925 aaKnown RBP20.55■□□□□ 0.88
RAB5A-208ENST00000476544 ARHGAP23Q9P227 1491 aa20.55■□□□□ 0.88
RAB5A-208ENST00000476544 STAG3Q9UJ98 1225 aa20.54■□□□□ 0.88
RAB5A-208ENST00000476544 MED14O60244 1454 aa20.54■□□□□ 0.88
RAB5A-208ENST00000476544 NEURL4Q96JN8 1562 aa20.53■□□□□ 0.88
RAB5A-208ENST00000476544 LTBP4Q8N2S1 1624 aa20.53■□□□□ 0.88
RAB5A-208ENST00000476544 FBXO41Q8TF61 875 aa20.52■□□□□ 0.88
RAB5A-208ENST00000476544 IQGAP3Q86VI3 1631 aa20.52■□□□□ 0.88
RAB5A-208ENST00000476544 NPHP4O75161 1426 aaPredicted RBP20.52■□□□□ 0.87
RAB5A-208ENST00000476544 TET3O43151 1660 aa20.51■□□□□ 0.87
RAB5A-208ENST00000476544 SLIT1O75093 1534 aa20.5■□□□□ 0.87
RAB5A-208ENST00000476544 SLC4A1APQ9BWU0 796 aaKnown RBP20.5■□□□□ 0.87
RAB5A-208ENST00000476544 FOXD1Q16676 465 aa20.49■□□□□ 0.87
RAB5A-208ENST00000476544 PIK3C2BO00750 1634 aa20.49■□□□□ 0.87
RAB5A-208ENST00000476544 EID1Q9Y6B2 187 aa20.48■□□□□ 0.87
RAB5A-208ENST00000476544 E9PCH4 1651 aa20.48■□□□□ 0.87
RAB5A-208ENST00000476544 UBR1Q8IWV7 1749 aa20.47■□□□□ 0.87
RAB5A-208ENST00000476544 CHGAP10645 457 aaKnown RBP20.47■□□□□ 0.87
RAB5A-208ENST00000476544 MPHOSPH9Q99550 1183 aa20.47■□□□□ 0.87
RAB5A-208ENST00000476544 SETD5Q9C0A6 1442 aa20.46■□□□□ 0.87
RAB5A-208ENST00000476544 SCAF11Q99590 1463 aaKnown RBP20.46■□□□□ 0.87
RAB5A-208ENST00000476544 NUTM2DQ5VT03 806 aaPredicted RBP20.44■□□□□ 0.86
RAB5A-208ENST00000476544 ZFYVE9O95405 1425 aa20.44■□□□□ 0.86
RAB5A-208ENST00000476544 SLC26A8Q96RN1 970 aa20.43■□□□□ 0.86
RAB5A-208ENST00000476544 SENP3Q9H4L4 574 aaPredicted RBP20.43■□□□□ 0.86
RAB5A-208ENST00000476544 GCC2Q8IWJ2 1684 aa20.42■□□□□ 0.86
RAB5A-208ENST00000476544 RAB3GAP2Q9H2M9 1393 aa20.41■□□□□ 0.86
RAB5A-208ENST00000476544 ADGRB3O60242 1522 aa20.4■□□□□ 0.86
RAB5A-208ENST00000476544 RIMS2Q9UQ26 1411 aa20.4■□□□□ 0.86
RAB5A-208ENST00000476544 TMEM131LA2VDJ0 1609 aa20.38■□□□□ 0.85
RAB5A-208ENST00000476544 HRCP23327 699 aa20.38■□□□□ 0.85
RAB5A-208ENST00000476544 HDGFP51858 240 aaKnown RBP20.37■□□□□ 0.85
RAB5A-208ENST00000476544 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms