RNA–Protein interactions for RNA: ENST00000476538.1

APH1A-206, Transcript of aph-1 homolog A, gamma-secretase subunit, humanhuman

TSL 2

Gene APH1A, Length 793 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1A-206ENST00000476538 MYO3AQ8NEV4 1616 aa23.59■■□□□ 1.37
APH1A-206ENST00000476538 RNF17Q9BXT8 1623 aaKnown RBP23.59■■□□□ 1.37
APH1A-206ENST00000476538 ABCC5O15440 1437 aa23.59■■□□□ 1.37
APH1A-206ENST00000476538 STRCQ7RTU9 1775 aa23.57■■□□□ 1.36
APH1A-206ENST00000476538 ZNF142P52746 1687 aaPredicted RBP23.57■■□□□ 1.36
APH1A-206ENST00000476538 DAPK1P53355 1430 aa23.56■■□□□ 1.36
APH1A-206ENST00000476538 DUOX2Q9NRD8 1548 aa23.55■■□□□ 1.36
APH1A-206ENST00000476538 ILDR1Q86SU0 546 aaPredicted RBP23.54■■□□□ 1.36
APH1A-206ENST00000476538 PZPP20742 1482 aa23.53■■□□□ 1.36
APH1A-206ENST00000476538 ZC3H13Q5T200 1668 aaKnown RBP23.53■■□□□ 1.36
APH1A-206ENST00000476538 CEP170BQ9Y4F5 1589 aaPredicted RBP23.52■■□□□ 1.36
APH1A-206ENST00000476538 WASHC2CQ9Y4E1 1318 aa23.52■■□□□ 1.36
APH1A-206ENST00000476538 KIF15Q9NS87 1388 aa23.52■■□□□ 1.36
APH1A-206ENST00000476538 MROH1Q8NDA8 1641 aa23.51■■□□□ 1.35
APH1A-206ENST00000476538 NCOA1Q15788 1441 aa23.5■■□□□ 1.35
APH1A-206ENST00000476538 ABCC3O15438 1527 aa23.49■■□□□ 1.35
APH1A-206ENST00000476538 CAMSAP1Q5T5Y3 1602 aa23.49■■□□□ 1.35
APH1A-206ENST00000476538 ERBINQ96RT1 1412 aa23.49■■□□□ 1.35
APH1A-206ENST00000476538 DMRT2Q9Y5R5 561 aa23.48■■□□□ 1.35
APH1A-206ENST00000476538 PRDM15P57071 1507 aaPredicted RBP23.45■■□□□ 1.34
APH1A-206ENST00000476538 PTPRTO14522 1441 aa23.45■■□□□ 1.34
APH1A-206ENST00000476538 A2ML1A8K2U0 1454 aa23.44■■□□□ 1.34
APH1A-206ENST00000476538 PLA2R1Q13018 1463 aa23.44■■□□□ 1.34
APH1A-206ENST00000476538 TNRQ92752 1358 aa23.44■■□□□ 1.34
APH1A-206ENST00000476538 ANKRD30AQ9BXX3 1397 aa23.43■■□□□ 1.34
APH1A-206ENST00000476538 RRP7BPQ9NSQ0 103 aa23.43■■□□□ 1.34
APH1A-206ENST00000476538 CEP152O94986 1710 aa23.42■■□□□ 1.34
APH1A-206ENST00000476538 DEPDC5O75140 1603 aa23.42■■□□□ 1.34
APH1A-206ENST00000476538 FBXO31Q5XUX0 539 aaPredicted RBP23.42■■□□□ 1.34
APH1A-206ENST00000476538 ADGRL2O95490 1459 aa23.42■■□□□ 1.34
APH1A-206ENST00000476538 FAM50AQ14320 339 aaKnown RBP23.4■■□□□ 1.34
APH1A-206ENST00000476538 FBXO41Q8TF61 875 aa23.39■■□□□ 1.33
APH1A-206ENST00000476538 CHIC2Q9UKJ5 165 aa23.39■■□□□ 1.33
APH1A-206ENST00000476538 SPATA31D1Q6ZQQ2 1576 aa23.39■■□□□ 1.33
APH1A-206ENST00000476538 NLRP1Q9C000 1473 aa23.37■■□□□ 1.33
APH1A-206ENST00000476538 ERVK-7P63135 1459 aa23.36■■□□□ 1.33
APH1A-206ENST00000476538 PKD2Q13563 968 aa23.33■■□□□ 1.33
APH1A-206ENST00000476538 CERKQ8TCT0 537 aa23.33■■□□□ 1.33
APH1A-206ENST00000476538 NCKAP5LQ9HCH0 1330 aa23.33■■□□□ 1.32
APH1A-206ENST00000476538 ARHGAP31Q2M1Z3 1444 aa23.32■■□□□ 1.32
APH1A-206ENST00000476538 UGGT1Q9NYU2 1555 aa23.31■■□□□ 1.32
APH1A-206ENST00000476538 VWDEQ8N2E2 1590 aa23.31■■□□□ 1.32
APH1A-206ENST00000476538 POLR1AO95602 1720 aaPredicted RBP23.3■■□□□ 1.32
APH1A-206ENST00000476538 KANK1Q14678 1352 aa23.3■■□□□ 1.32
APH1A-206ENST00000476538 LMTK2Q8IWU2 1503 aa23.29■■□□□ 1.32
APH1A-206ENST00000476538 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.28■■□□□ 1.32
APH1A-206ENST00000476538 LTBP4Q8N2S1 1624 aa23.28■■□□□ 1.32
APH1A-206ENST00000476538 ANKRD50Q9ULJ7 1429 aa23.27■■□□□ 1.32
APH1A-206ENST00000476538 NEURL4Q96JN8 1562 aa23.27■■□□□ 1.32
APH1A-206ENST00000476538 PPARGC1BQ86YN6 1023 aaKnown RBP23.25■■□□□ 1.31
APH1A-206ENST00000476538 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.25■■□□□ 1.31
APH1A-206ENST00000476538 EFCAB6Q5THR3 1501 aa23.23■■□□□ 1.31
APH1A-206ENST00000476538 THEMISQ8N1K5 641 aaPredicted RBP23.23■■□□□ 1.31
APH1A-206ENST00000476538 ROCK1Q13464 1354 aa23.23■■□□□ 1.31
APH1A-206ENST00000476538 UBR1Q8IWV7 1749 aa23.21■■□□□ 1.31
APH1A-206ENST00000476538 CFAP65Q6ZU64 1925 aaKnown RBP23.2■■□□□ 1.3
APH1A-206ENST00000476538 UNC13BO14795 1591 aa23.19■■□□□ 1.3
APH1A-206ENST00000476538 IQSEC2Q5JU85 1478 aa23.18■■□□□ 1.3
APH1A-206ENST00000476538 ZNF335Q9H4Z2 1342 aaPredicted RBP23.18■■□□□ 1.3
APH1A-206ENST00000476538 ANKLE2Q86XL3 938 aa23.18■■□□□ 1.3
APH1A-206ENST00000476538 MED14O60244 1454 aa23.17■■□□□ 1.3
APH1A-206ENST00000476538 RRBP1Q9P2E9 1410 aaKnown RBP23.16■■□□□ 1.3
APH1A-206ENST00000476538 TET3O43151 1660 aa23.15■■□□□ 1.3
APH1A-206ENST00000476538 PIK3C2BO00750 1634 aa23.15■■□□□ 1.3
APH1A-206ENST00000476538 SYNMO15061 1565 aa23.14■■□□□ 1.3
APH1A-206ENST00000476538 RPRD2Q5VT52 1461 aaKnown RBP23.14■■□□□ 1.29
APH1A-206ENST00000476538 NPHP4O75161 1426 aaPredicted RBP23.14■■□□□ 1.29
APH1A-206ENST00000476538 IQGAP1P46940 1657 aa23.13■■□□□ 1.29
APH1A-206ENST00000476538 ITGAEP38570 1179 aa23.13■■□□□ 1.29
APH1A-206ENST00000476538 NOS1P29475 1434 aa23.13■■□□□ 1.29
APH1A-206ENST00000476538 KDM5AP29375 1690 aaKnown RBP23.13■■□□□ 1.29
APH1A-206ENST00000476538 SLIT1O75093 1534 aa23.12■■□□□ 1.29
APH1A-206ENST00000476538 ARHGAP23Q9P227 1491 aa23.11■■□□□ 1.29
APH1A-206ENST00000476538 GCC2Q8IWJ2 1684 aa23.11■■□□□ 1.29
APH1A-206ENST00000476538 IQGAP3Q86VI3 1631 aa23.09■■□□□ 1.29
APH1A-206ENST00000476538 SCAF11Q99590 1463 aaKnown RBP23.09■■□□□ 1.29
APH1A-206ENST00000476538 CPS1P31327 1500 aa23.07■■□□□ 1.28
APH1A-206ENST00000476538 ADGRB3O60242 1522 aa23.06■■□□□ 1.28
APH1A-206ENST00000476538 IDI1Q13907 227 aa23.04■■□□□ 1.28
APH1A-206ENST00000476538 E9PCH4 1651 aa23.03■■□□□ 1.28
APH1A-206ENST00000476538 TMEM2Q9UHN6 1383 aa23.03■■□□□ 1.28
APH1A-206ENST00000476538 STAG3Q9UJ98 1225 aa23.03■■□□□ 1.28
APH1A-206ENST00000476538 SLC52A1Q9NWF4 448 aa23.02■■□□□ 1.28
APH1A-206ENST00000476538 LTKP29376 864 aa23.01■■□□□ 1.27
APH1A-206ENST00000476538 TXNDC2Q86VQ3 553 aa23■■□□□ 1.27
APH1A-206ENST00000476538 NUP155O75694 1391 aa23■■□□□ 1.27
APH1A-206ENST00000476538 EID1Q9Y6B2 187 aa22.99■■□□□ 1.27
APH1A-206ENST00000476538 NAIPQ13075 1403 aa22.96■■□□□ 1.27
APH1A-206ENST00000476538 STRCP1A6NGW2 1772 aa22.95■■□□□ 1.26
APH1A-206ENST00000476538 TMEM131LA2VDJ0 1609 aa22.93■■□□□ 1.26
APH1A-206ENST00000476538 UBAP1LF5GYI3 381 aa22.92■■□□□ 1.26
APH1A-206ENST00000476538 MYO5BQ9ULV0 1848 aa22.92■■□□□ 1.26
APH1A-206ENST00000476538 HFM1A2PYH4 1435 aa22.91■■□□□ 1.26
APH1A-206ENST00000476538 ZFYVE9O95405 1425 aa22.9■■□□□ 1.26
APH1A-206ENST00000476538 LRRC7Q96NW7 1537 aa22.89■■□□□ 1.26
APH1A-206ENST00000476538 SPHKAPQ2M3C7 1700 aa22.88■■□□□ 1.25
APH1A-206ENST00000476538 RIMS2Q9UQ26 1411 aa22.85■■□□□ 1.25
APH1A-206ENST00000476538 PLEKHG1Q9ULL1 1385 aa22.82■■□□□ 1.24
APH1A-206ENST00000476538 TOM1O60784 492 aa22.82■■□□□ 1.24
APH1A-206ENST00000476538 CHGAP10645 457 aaKnown RBP22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms