RNA–Protein interactions for RNA: ENST00000476517.1

CDKAL1-203, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

TSL 2

Gene CDKAL1, Length 840 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-203ENST00000476517 ERBINQ96RT1 1412 aa18.06■□□□□ 0.48
CDKAL1-203ENST00000476517 EIF2AK4Q9P2K8 1649 aaKnown RBP18.06■□□□□ 0.48
CDKAL1-203ENST00000476517 PTPRMP28827 1452 aa18.06■□□□□ 0.48
CDKAL1-203ENST00000476517 SCAPERQ9BY12 1400 aa18.06■□□□□ 0.48
CDKAL1-203ENST00000476517 KDM5CP41229 1560 aa18.05■□□□□ 0.48
CDKAL1-203ENST00000476517 DISP3Q9P2K9 1392 aa18.04■□□□□ 0.48
CDKAL1-203ENST00000476517 NCBP3Q53F19 620 aaKnown RBP18.04■□□□□ 0.48
CDKAL1-203ENST00000476517 KIDINS220Q9ULH0 1771 aa18.04■□□□□ 0.48
CDKAL1-203ENST00000476517 PZPP20742 1482 aa18.03■□□□□ 0.48
CDKAL1-203ENST00000476517 IQGAP3Q86VI3 1631 aa18.03■□□□□ 0.48
CDKAL1-203ENST00000476517 RICTORQ6R327 1708 aa18.03■□□□□ 0.48
CDKAL1-203ENST00000476517 ADAMTSL3P82987 1691 aa18.03■□□□□ 0.48
CDKAL1-203ENST00000476517 SPAG9O60271 1321 aaKnown RBP18.02■□□□□ 0.48
CDKAL1-203ENST00000476517 POGZQ7Z3K3 1410 aa18.02■□□□□ 0.48
CDKAL1-203ENST00000476517 RNF216Q9NWF9 866 aaPredicted RBP18.02■□□□□ 0.48
CDKAL1-203ENST00000476517 DEPDC5O75140 1603 aa18.01■□□□□ 0.47
CDKAL1-203ENST00000476517 DENND4BO75064 1496 aaPredicted RBP18.01■□□□□ 0.47
CDKAL1-203ENST00000476517 MPHOSPH9Q99550 1183 aa18■□□□□ 0.47
CDKAL1-203ENST00000476517 MAGI2Q86UL8 1455 aa18■□□□□ 0.47
CDKAL1-203ENST00000476517 TIMELESSQ9UNS1 1208 aa17.99■□□□□ 0.47
CDKAL1-203ENST00000476517 FAM135AQ9P2D6 1515 aa17.98■□□□□ 0.47
CDKAL1-203ENST00000476517 CERKQ8TCT0 537 aa17.96■□□□□ 0.47
CDKAL1-203ENST00000476517 SLC4A1APQ9BWU0 796 aaKnown RBP17.96■□□□□ 0.47
CDKAL1-203ENST00000476517 BCORL1Q5H9F3 1711 aa17.95■□□□□ 0.46
CDKAL1-203ENST00000476517 NUP155O75694 1391 aa17.95■□□□□ 0.46
CDKAL1-203ENST00000476517 TONSLQ96HA7 1378 aa17.95■□□□□ 0.46
CDKAL1-203ENST00000476517 MLH3Q9UHC1 1453 aa17.95■□□□□ 0.46
CDKAL1-203ENST00000476517 ABCA6Q8N139 1617 aa17.94■□□□□ 0.46
CDKAL1-203ENST00000476517 AFAP1Q8N556 730 aa17.93■□□□□ 0.46
CDKAL1-203ENST00000476517 RNF17Q9BXT8 1623 aaKnown RBP17.92■□□□□ 0.46
CDKAL1-203ENST00000476517 NEUROD1Q13562 356 aa17.92■□□□□ 0.46
CDKAL1-203ENST00000476517 ZMYM4Q5VZL5 1548 aa17.92■□□□□ 0.46
CDKAL1-203ENST00000476517 TET3O43151 1660 aa17.91■□□□□ 0.46
CDKAL1-203ENST00000476517 SIN3AQ96ST3 1273 aa17.91■□□□□ 0.46
CDKAL1-203ENST00000476517 MYT1LQ9UL68 1186 aa17.91■□□□□ 0.46
CDKAL1-203ENST00000476517 FRMPD1Q5SYB0 1578 aa17.91■□□□□ 0.46
CDKAL1-203ENST00000476517 PRDM15P57071 1507 aaPredicted RBP17.9■□□□□ 0.46
CDKAL1-203ENST00000476517 RPRD2Q5VT52 1461 aaKnown RBP17.89■□□□□ 0.45
CDKAL1-203ENST00000476517 ANKRD30BQ9BXX2 1392 aa17.89■□□□□ 0.45
CDKAL1-203ENST00000476517 DIP2CQ9Y2E4 1556 aa17.88■□□□□ 0.45
CDKAL1-203ENST00000476517 DCAF8L1A6NGE4 600 aa17.88■□□□□ 0.45
CDKAL1-203ENST00000476517 A2MP01023 1474 aa17.88■□□□□ 0.45
CDKAL1-203ENST00000476517 SPATA31D1Q6ZQQ2 1576 aa17.87■□□□□ 0.45
CDKAL1-203ENST00000476517 DHX29Q7Z478 1369 aaKnown RBP17.86■□□□□ 0.45
CDKAL1-203ENST00000476517 SPHKAPQ2M3C7 1700 aa17.86■□□□□ 0.45
CDKAL1-203ENST00000476517 E9PCH4 1651 aa17.85■□□□□ 0.45
CDKAL1-203ENST00000476517 CEP152O94986 1710 aa17.85■□□□□ 0.45
CDKAL1-203ENST00000476517 VWDEQ8N2E2 1590 aa17.85■□□□□ 0.45
CDKAL1-203ENST00000476517 MROH1Q8NDA8 1641 aa17.85■□□□□ 0.45
CDKAL1-203ENST00000476517 MADDQ8WXG6 1647 aa17.85■□□□□ 0.45
CDKAL1-203ENST00000476517 KANK1Q14678 1352 aa17.84■□□□□ 0.45
CDKAL1-203ENST00000476517 PKD2Q13563 968 aa17.84■□□□□ 0.45
CDKAL1-203ENST00000476517 ZC3H13Q5T200 1668 aaKnown RBP17.83■□□□□ 0.44
CDKAL1-203ENST00000476517 REREQ9P2R6 1566 aa17.79■□□□□ 0.44
CDKAL1-203ENST00000476517 HSPA2P54652 639 aa17.79■□□□□ 0.44
CDKAL1-203ENST00000476517 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.79■□□□□ 0.44
CDKAL1-203ENST00000476517 ZNF316A6NFI3 1004 aaPredicted RBP17.78■□□□□ 0.44
CDKAL1-203ENST00000476517 EFCAB6Q5THR3 1501 aa17.77■□□□□ 0.43
CDKAL1-203ENST00000476517 LMTK2Q8IWU2 1503 aa17.77■□□□□ 0.43
CDKAL1-203ENST00000476517 ATP10AO60312 1499 aa17.76■□□□□ 0.43
CDKAL1-203ENST00000476517 PPP1R15AO75807 674 aaPredicted RBP17.76■□□□□ 0.43
CDKAL1-203ENST00000476517 ARHGEF40Q8TER5 1519 aa17.76■□□□□ 0.43
CDKAL1-203ENST00000476517 CAMSAP1Q5T5Y3 1602 aa17.76■□□□□ 0.43
CDKAL1-203ENST00000476517 CCDC144AA2RUR9 1427 aa17.75■□□□□ 0.43
CDKAL1-203ENST00000476517 KIF3BO15066 747 aa17.75■□□□□ 0.43
CDKAL1-203ENST00000476517 RAPGEF3O95398 923 aa17.75■□□□□ 0.43
CDKAL1-203ENST00000476517 TRPM2O94759 1503 aa17.75■□□□□ 0.43
CDKAL1-203ENST00000476517 RIMS1Q86UR5 1692 aaKnown RBP17.74■□□□□ 0.43
CDKAL1-203ENST00000476517 KIF1BO60333 1816 aa17.73■□□□□ 0.43
CDKAL1-203ENST00000476517 YEATS2Q9ULM3 1422 aa17.71■□□□□ 0.43
CDKAL1-203ENST00000476517 ABCC3O15438 1527 aa17.69■□□□□ 0.42
CDKAL1-203ENST00000476517 CACNB1Q02641 598 aaPredicted RBP17.69■□□□□ 0.42
CDKAL1-203ENST00000476517 CLTCL1P53675 1640 aa17.69■□□□□ 0.42
CDKAL1-203ENST00000476517 AGLP35573 1532 aa17.68■□□□□ 0.42
CDKAL1-203ENST00000476517 L3MBTL2Q969R5 705 aa17.67■□□□□ 0.42
CDKAL1-203ENST00000476517 ARID4BQ4LE39 1312 aaPredicted RBP17.67■□□□□ 0.42
CDKAL1-203ENST00000476517 NEURL4Q96JN8 1562 aa17.66■□□□□ 0.42
CDKAL1-203ENST00000476517 PLA2R1Q13018 1463 aa17.66■□□□□ 0.42
CDKAL1-203ENST00000476517 PTPRTO14522 1441 aa17.65■□□□□ 0.42
CDKAL1-203ENST00000476517 CFAP65Q6ZU64 1925 aaKnown RBP17.65■□□□□ 0.42
CDKAL1-203ENST00000476517 POLR1AO95602 1720 aaPredicted RBP17.64■□□□□ 0.41
CDKAL1-203ENST00000476517 NPM3O75607 178 aaKnown RBP17.64■□□□□ 0.41
CDKAL1-203ENST00000476517 UHRF1BP1Q6BDS2 1440 aa17.61■□□□□ 0.41
CDKAL1-203ENST00000476517 IFT172Q9UG01 1749 aa17.61■□□□□ 0.41
CDKAL1-203ENST00000476517 TRPM1Q7Z4N2 1603 aa17.6■□□□□ 0.41
CDKAL1-203ENST00000476517 PREX1Q8TCU6 1659 aa17.6■□□□□ 0.41
CDKAL1-203ENST00000476517 SIGLEC1Q9BZZ2 1709 aa17.6■□□□□ 0.41
CDKAL1-203ENST00000476517 MROH2AA6NES4 1674 aa17.59■□□□□ 0.41
CDKAL1-203ENST00000476517 CLTCQ00610 1675 aaKnown RBP17.59■□□□□ 0.41
CDKAL1-203ENST00000476517 RALGAPBQ86X10 1494 aa17.59■□□□□ 0.41
CDKAL1-203ENST00000476517 GGT6Q6P531 493 aa17.59■□□□□ 0.41
CDKAL1-203ENST00000476517 STRCQ7RTU9 1775 aa17.58■□□□□ 0.41
CDKAL1-203ENST00000476517 DIEXFQ68CQ4 756 aaKnown RBP17.58■□□□□ 0.4
CDKAL1-203ENST00000476517 LAMC1P11047 1609 aa17.58■□□□□ 0.4
CDKAL1-203ENST00000476517 NPATQ14207 1427 aa17.57■□□□□ 0.4
CDKAL1-203ENST00000476517 CNTLNQ9NXG0 1405 aa17.57■□□□□ 0.4
CDKAL1-203ENST00000476517 PIK3C2BO00750 1634 aa17.57■□□□□ 0.4
CDKAL1-203ENST00000476517 IQSEC2Q5JU85 1478 aa17.56■□□□□ 0.4
CDKAL1-203ENST00000476517 ARHGAP31Q2M1Z3 1444 aa17.56■□□□□ 0.4
CDKAL1-203ENST00000476517 WASHC2CQ9Y4E1 1318 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms