RNA–Protein interactions for RNA: ENST00000476501.3

RN7SL559P-201, Transcript of RNA, 7SL, cytoplasmic 559, pseudogene, humanhuman

BASIC

Gene RN7SL559P, Length 297 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL559P-201ENST00000476501 TNRQ92752 1358 aa18.24■□□□□ 0.51
RN7SL559P-201ENST00000476501 KIAA1107Q9UPP5 1409 aa18.23■□□□□ 0.51
RN7SL559P-201ENST00000476501 FBXO31Q5XUX0 539 aaPredicted RBP18.23■□□□□ 0.51
RN7SL559P-201ENST00000476501 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.22■□□□□ 0.51
RN7SL559P-201ENST00000476501 FYCO1Q9BQS8 1478 aa18.21■□□□□ 0.51
RN7SL559P-201ENST00000476501 THEMISQ8N1K5 641 aaPredicted RBP18.2■□□□□ 0.5
RN7SL559P-201ENST00000476501 VWDEQ8N2E2 1590 aa18.19■□□□□ 0.5
RN7SL559P-201ENST00000476501 KIF3BO15066 747 aa18.18■□□□□ 0.5
RN7SL559P-201ENST00000476501 NPHP4O75161 1426 aaPredicted RBP18.17■□□□□ 0.5
RN7SL559P-201ENST00000476501 ALKQ9UM73 1620 aa18.16■□□□□ 0.5
RN7SL559P-201ENST00000476501 WASHC2CQ9Y4E1 1318 aa18.16■□□□□ 0.5
RN7SL559P-201ENST00000476501 UGGT1Q9NYU2 1555 aa18.16■□□□□ 0.5
RN7SL559P-201ENST00000476501 PZPP20742 1482 aa18.15■□□□□ 0.5
RN7SL559P-201ENST00000476501 KDM5DQ9BY66 1539 aa18.15■□□□□ 0.5
RN7SL559P-201ENST00000476501 FAM135AQ9P2D6 1515 aa18.15■□□□□ 0.5
RN7SL559P-201ENST00000476501 ZNF644Q9H582 1327 aaPredicted RBP18.15■□□□□ 0.5
RN7SL559P-201ENST00000476501 MTUS2Q5JR59 1369 aa18.15■□□□□ 0.5
RN7SL559P-201ENST00000476501 DHX29Q7Z478 1369 aaKnown RBP18.15■□□□□ 0.5
RN7SL559P-201ENST00000476501 IQGAP1P46940 1657 aa18.14■□□□□ 0.49
RN7SL559P-201ENST00000476501 DEPDC5O75140 1603 aa18.13■□□□□ 0.49
RN7SL559P-201ENST00000476501 RNF17Q9BXT8 1623 aaKnown RBP18.12■□□□□ 0.49
RN7SL559P-201ENST00000476501 MIA2Q96PC5 1412 aa18.12■□□□□ 0.49
RN7SL559P-201ENST00000476501 NLRP1Q9C000 1473 aa18.12■□□□□ 0.49
RN7SL559P-201ENST00000476501 CHIC1Q5VXU3 224 aa18.11■□□□□ 0.49
RN7SL559P-201ENST00000476501 MED14O60244 1454 aa18.11■□□□□ 0.49
RN7SL559P-201ENST00000476501 STRCP1A6NGW2 1772 aa18.1■□□□□ 0.49
RN7SL559P-201ENST00000476501 LRRC7Q96NW7 1537 aa18.1■□□□□ 0.49
RN7SL559P-201ENST00000476501 RTEL1-TNFRSF6BF6WH68 1400 aa18.1■□□□□ 0.49
RN7SL559P-201ENST00000476501 RGS17Q9UGC6 210 aaPredicted RBP18.09■□□□□ 0.49
RN7SL559P-201ENST00000476501 SYNMO15061 1565 aa18.08■□□□□ 0.49
RN7SL559P-201ENST00000476501 TIAM1Q13009 1591 aa18.08■□□□□ 0.48
RN7SL559P-201ENST00000476501 MBD5Q9P267 1494 aa18.07■□□□□ 0.48
RN7SL559P-201ENST00000476501 CCDC141Q6ZP82 1450 aa18.02■□□□□ 0.48
RN7SL559P-201ENST00000476501 EHBP1L1Q8N3D4 1523 aa18■□□□□ 0.47
RN7SL559P-201ENST00000476501 POTEAQ6S8J7 498 aa17.99■□□□□ 0.47
RN7SL559P-201ENST00000476501 CFAP65Q6ZU64 1925 aaKnown RBP17.98■□□□□ 0.47
RN7SL559P-201ENST00000476501 TSPY4P0CV99 314 aa17.98■□□□□ 0.47
RN7SL559P-201ENST00000476501 TSPY10P0CW01 314 aa17.98■□□□□ 0.47
RN7SL559P-201ENST00000476501 ZC3H13Q5T200 1668 aaKnown RBP17.98■□□□□ 0.47
RN7SL559P-201ENST00000476501 CAMSAP2Q08AD1 1489 aa17.97■□□□□ 0.47
RN7SL559P-201ENST00000476501 RSPH4AQ5TD94 716 aa17.97■□□□□ 0.47
RN7SL559P-201ENST00000476501 SCAF11Q99590 1463 aaKnown RBP17.95■□□□□ 0.46
RN7SL559P-201ENST00000476501 CEP162Q5TB80 1403 aa17.95■□□□□ 0.46
RN7SL559P-201ENST00000476501 XIRP1Q702N8 1843 aaKnown RBP17.95■□□□□ 0.46
RN7SL559P-201ENST00000476501 UBR1Q8IWV7 1749 aa17.95■□□□□ 0.46
RN7SL559P-201ENST00000476501 TXNDC2Q86VQ3 553 aa17.94■□□□□ 0.46
RN7SL559P-201ENST00000476501 ERVK-7P63135 1459 aa17.94■□□□□ 0.46
RN7SL559P-201ENST00000476501 ABCC3O15438 1527 aa17.93■□□□□ 0.46
RN7SL559P-201ENST00000476501 SETD1AO15047 1707 aaKnown RBP17.92■□□□□ 0.46
RN7SL559P-201ENST00000476501 EID1Q9Y6B2 187 aa17.92■□□□□ 0.46
RN7SL559P-201ENST00000476501 FAM135BQ49AJ0 1406 aa17.91■□□□□ 0.46
RN7SL559P-201ENST00000476501 LTKP29376 864 aa17.91■□□□□ 0.46
RN7SL559P-201ENST00000476501 CEP152O94986 1710 aa17.91■□□□□ 0.46
RN7SL559P-201ENST00000476501 ROBO1Q9Y6N7 1651 aa17.89■□□□□ 0.45
RN7SL559P-201ENST00000476501 NCOA2Q15596 1464 aa17.88■□□□□ 0.45
RN7SL559P-201ENST00000476501 STAG3Q9UJ98 1225 aa17.88■□□□□ 0.45
RN7SL559P-201ENST00000476501 ARHGEF5Q12774 1597 aa17.87■□□□□ 0.45
RN7SL559P-201ENST00000476501 RBM33Q96EV2 1170 aaKnown RBP17.86■□□□□ 0.45
RN7SL559P-201ENST00000476501 TMEM94Q12767 1356 aa17.86■□□□□ 0.45
RN7SL559P-201ENST00000476501 SLIT1O75093 1534 aa17.85■□□□□ 0.45
RN7SL559P-201ENST00000476501 PROSER2Q86WR7 435 aaPredicted RBP17.85■□□□□ 0.45
RN7SL559P-201ENST00000476501 ARHGAP23Q9P227 1491 aa17.85■□□□□ 0.45
RN7SL559P-201ENST00000476501 EIF2AK4Q9P2K8 1649 aaKnown RBP17.85■□□□□ 0.45
RN7SL559P-201ENST00000476501 PHLPP1O60346 1717 aa17.81■□□□□ 0.44
RN7SL559P-201ENST00000476501 MROH1Q8NDA8 1641 aa17.81■□□□□ 0.44
RN7SL559P-201ENST00000476501 PIK3C2BO00750 1634 aa17.8■□□□□ 0.44
RN7SL559P-201ENST00000476501 KCNA6P17658 529 aa17.8■□□□□ 0.44
RN7SL559P-201ENST00000476501 BCANQ96GW7 911 aa17.8■□□□□ 0.44
RN7SL559P-201ENST00000476501 SLC26A8Q96RN1 970 aa17.8■□□□□ 0.44
RN7SL559P-201ENST00000476501 LRRC9Q6ZRR7 1453 aa17.8■□□□□ 0.44
RN7SL559P-201ENST00000476501 MAST1Q9Y2H9 1570 aa17.79■□□□□ 0.44
RN7SL559P-201ENST00000476501 MEX3CQ5U5Q3 659 aaKnown RBP17.79■□□□□ 0.44
RN7SL559P-201ENST00000476501 TMEM2Q9UHN6 1383 aa17.79■□□□□ 0.44
RN7SL559P-201ENST00000476501 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.78■□□□□ 0.44
RN7SL559P-201ENST00000476501 MSH6P52701 1360 aa17.78■□□□□ 0.44
RN7SL559P-201ENST00000476501 MAP3K1Q13233 1512 aa17.77■□□□□ 0.44
RN7SL559P-201ENST00000476501 TRIM52Q96A61 297 aa17.77■□□□□ 0.44
RN7SL559P-201ENST00000476501 JCADQ9P266 1359 aa17.77■□□□□ 0.43
RN7SL559P-201ENST00000476501 UPF1Q92900 1129 aaKnown RBP eCLIP17.75■□□□□ 0.43
RN7SL559P-201ENST00000476501 SLAIN2Q9P270 581 aa17.75■□□□□ 0.43
RN7SL559P-201ENST00000476501 DUOX2Q9NRD8 1548 aa17.75■□□□□ 0.43
RN7SL559P-201ENST00000476501 ARHGAP31Q2M1Z3 1444 aa17.74■□□□□ 0.43
RN7SL559P-201ENST00000476501 PRDM15P57071 1507 aaPredicted RBP17.74■□□□□ 0.43
RN7SL559P-201ENST00000476501 EFCAB6Q5THR3 1501 aa17.74■□□□□ 0.43
RN7SL559P-201ENST00000476501 ZNF772Q68DY9 489 aaPredicted RBP17.72■□□□□ 0.43
RN7SL559P-201ENST00000476501 NKTRP30414 1462 aaKnown RBP17.71■□□□□ 0.43
RN7SL559P-201ENST00000476501 KANK1Q14678 1352 aa17.71■□□□□ 0.43
RN7SL559P-201ENST00000476501 IDI1Q13907 227 aa17.7■□□□□ 0.42
RN7SL559P-201ENST00000476501 RRP7BPQ9NSQ0 103 aa17.7■□□□□ 0.42
RN7SL559P-201ENST00000476501 TET3O43151 1660 aa17.7■□□□□ 0.42
RN7SL559P-201ENST00000476501 KIF15Q9NS87 1388 aa17.69■□□□□ 0.42
RN7SL559P-201ENST00000476501 KDM5AP29375 1690 aaKnown RBP17.69■□□□□ 0.42
RN7SL559P-201ENST00000476501 C14orf37Q86TY3 774 aa17.68■□□□□ 0.42
RN7SL559P-201ENST00000476501 SPATA31A6Q5VVP1 1343 aa17.68■□□□□ 0.42
RN7SL559P-201ENST00000476501 NWD1Q149M9 1564 aa17.67■□□□□ 0.42
RN7SL559P-201ENST00000476501 LRP6O75581 1613 aa17.67■□□□□ 0.42
RN7SL559P-201ENST00000476501 COL16A1Q07092 1604 aaPredicted RBP17.67■□□□□ 0.42
RN7SL559P-201ENST00000476501 MYOM3Q5VTT5 1437 aa17.66■□□□□ 0.42
RN7SL559P-201ENST00000476501 ERBINQ96RT1 1412 aa17.66■□□□□ 0.42
RN7SL559P-201ENST00000476501 RXRBP28702 533 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms