RNA–Protein interactions for RNA: ENST00000476408.1

CD53-204, Transcript of CD53 molecule, humanhuman

TSL 5

Gene CD53, Length 756 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD53-204ENST00000476408 WDR7Q9Y4E6 1490 aa9.23□□□□□ -0.93
CD53-204ENST00000476408 MPHOSPH9Q99550 1183 aa9.23□□□□□ -0.93
CD53-204ENST00000476408 MRS2Q9HD23 443 aa9.23□□□□□ -0.93
CD53-204ENST00000476408 KDM5CP41229 1560 aa9.23□□□□□ -0.93
CD53-204ENST00000476408 BRD4O60885 1362 aaPredicted RBP9.23□□□□□ -0.93
CD53-204ENST00000476408 ITSN2Q9NZM3 1697 aa9.23□□□□□ -0.93
CD53-204ENST00000476408 RALGAPBQ86X10 1494 aa9.22□□□□□ -0.93
CD53-204ENST00000476408 PLEKHH2Q8IVE3 1493 aa9.22□□□□□ -0.93
CD53-204ENST00000476408 TCERG1O14776 1098 aaKnown RBP9.22□□□□□ -0.93
CD53-204ENST00000476408 KIF7Q2M1P5 1343 aa9.22□□□□□ -0.93
CD53-204ENST00000476408 E9PCH4 1651 aa9.21□□□□□ -0.93
CD53-204ENST00000476408 WASHC2CQ9Y4E1 1318 aa9.21□□□□□ -0.94
CD53-204ENST00000476408 SHANK2Q9UPX8 1470 aa9.21□□□□□ -0.94
CD53-204ENST00000476408 KIAA0556O60303 1618 aa9.2□□□□□ -0.94
CD53-204ENST00000476408 LAMC1P11047 1609 aa9.2□□□□□ -0.94
CD53-204ENST00000476408 RTL5Q5HYW3 569 aaPredicted RBP9.2□□□□□ -0.94
CD53-204ENST00000476408 L3MBTL2Q969R5 705 aa9.2□□□□□ -0.94
CD53-204ENST00000476408 RTN4Q9NQC3 1192 aaKnown RBP9.2□□□□□ -0.94
CD53-204ENST00000476408 CROCC2H7BZ55 1655 aa9.2□□□□□ -0.94
CD53-204ENST00000476408 PPM1GO15355 546 aaPredicted RBP9.19□□□□□ -0.94
CD53-204ENST00000476408 KIF15Q9NS87 1388 aa9.19□□□□□ -0.94
CD53-204ENST00000476408 ABCC5O15440 1437 aa9.19□□□□□ -0.94
CD53-204ENST00000476408 KIAA1107Q9UPP5 1409 aa9.19□□□□□ -0.94
CD53-204ENST00000476408 PZPP20742 1482 aa9.18□□□□□ -0.94
CD53-204ENST00000476408 RALBP1Q15311 655 aa9.18□□□□□ -0.94
CD53-204ENST00000476408 ARAP3Q8WWN8 1544 aa9.18□□□□□ -0.94
CD53-204ENST00000476408 ZBTB47Q9UFB7 747 aaPredicted RBP9.18□□□□□ -0.94
CD53-204ENST00000476408 ADAMTSL3P82987 1691 aa9.17□□□□□ -0.94
CD53-204ENST00000476408 CCDC136Q96JN2 1154 aa9.17□□□□□ -0.94
CD53-204ENST00000476408 HIRIP3Q9BW71 556 aaPredicted RBP9.17□□□□□ -0.94
CD53-204ENST00000476408 PTPRMP28827 1452 aa9.16□□□□□ -0.94
CD53-204ENST00000476408 CACNB1Q02641 598 aaPredicted RBP9.16□□□□□ -0.94
CD53-204ENST00000476408 SPATA31D1Q6ZQQ2 1576 aa9.16□□□□□ -0.94
CD53-204ENST00000476408 B4GALNT3Q6L9W6 998 aa9.15□□□□□ -0.94
CD53-204ENST00000476408 CERKQ8TCT0 537 aa9.15□□□□□ -0.94
CD53-204ENST00000476408 PNISRQ8TF01 805 aaKnown RBP9.15□□□□□ -0.94
CD53-204ENST00000476408 DDRGK1Q96HY6 314 aa9.15□□□□□ -0.94
CD53-204ENST00000476408 ABCA8O94911 1581 aa9.15□□□□□ -0.95
CD53-204ENST00000476408 BCORL1Q5H9F3 1711 aa9.14□□□□□ -0.95
CD53-204ENST00000476408 USP47Q96K76 1375 aa9.14□□□□□ -0.95
CD53-204ENST00000476408 MYBBP1AQ9BQG0 1328 aaKnown RBP9.13□□□□□ -0.95
CD53-204ENST00000476408 NBPF8Q3BBV2 869 aa9.13□□□□□ -0.95
CD53-204ENST00000476408 CCDC184Q52MB2 194 aa9.13□□□□□ -0.95
CD53-204ENST00000476408 TROQ12816 1431 aaPredicted RBP9.13□□□□□ -0.95
CD53-204ENST00000476408 RAPGEF6Q8TEU7 1601 aa9.13□□□□□ -0.95
CD53-204ENST00000476408 P3H3Q8IVL6 736 aa9.12□□□□□ -0.95
CD53-204ENST00000476408 FAM9BQ8IZU0 186 aa9.12□□□□□ -0.95
CD53-204ENST00000476408 CCDC144AA2RUR9 1427 aa9.12□□□□□ -0.95
CD53-204ENST00000476408 PARD3Q8TEW0 1356 aa9.12□□□□□ -0.95
CD53-204ENST00000476408 RAPGEF3O95398 923 aa9.11□□□□□ -0.95
CD53-204ENST00000476408 RRP1P56182 461 aaKnown RBP9.11□□□□□ -0.95
CD53-204ENST00000476408 BACH2Q9BYV9 841 aa9.11□□□□□ -0.95
CD53-204ENST00000476408 BLMP54132 1417 aaPredicted RBP9.11□□□□□ -0.95
CD53-204ENST00000476408 GPRASP1Q5JY77 1395 aa9.11□□□□□ -0.95
CD53-204ENST00000476408 ABCA9Q8IUA7 1624 aa9.1□□□□□ -0.95
CD53-204ENST00000476408 ATP1B4Q9UN42 357 aaPredicted RBP9.1□□□□□ -0.95
CD53-204ENST00000476408 ARHGEF5Q12774 1597 aa9.1□□□□□ -0.95
CD53-204ENST00000476408 ANKRD30AQ9BXX3 1397 aa9.1□□□□□ -0.95
CD53-204ENST00000476408 MADDQ8WXG6 1647 aa9.09□□□□□ -0.95
CD53-204ENST00000476408 NUP153P49790 1475 aaKnown RBP9.09□□□□□ -0.95
CD53-204ENST00000476408 CAMSAP2Q08AD1 1489 aa9.09□□□□□ -0.95
CD53-204ENST00000476408 PAK3O75914 559 aaPredicted RBP9.09□□□□□ -0.95
CD53-204ENST00000476408 IRX6P78412 446 aaPredicted RBP9.09□□□□□ -0.95
CD53-204ENST00000476408 RRP7BPQ9NSQ0 103 aa9.09□□□□□ -0.95
CD53-204ENST00000476408 ZMYM3Q14202 1370 aa9.09□□□□□ -0.95
CD53-204ENST00000476408 EIF2AK4Q9P2K8 1649 aaKnown RBP9.09□□□□□ -0.95
CD53-204ENST00000476408 ATP10BO94823 1461 aa9.08□□□□□ -0.96
CD53-204ENST00000476408 NEO1Q92859 1461 aa9.08□□□□□ -0.96
CD53-204ENST00000476408 RIMS1Q86UR5 1692 aaKnown RBP9.08□□□□□ -0.96
CD53-204ENST00000476408 NLRP13Q86W25 1043 aa9.08□□□□□ -0.96
CD53-204ENST00000476408 SLC4A1APQ9BWU0 796 aaKnown RBP9.08□□□□□ -0.96
CD53-204ENST00000476408 CDK13Q14004 1512 aaKnown RBP9.08□□□□□ -0.96
CD53-204ENST00000476408 ARID3CA6NKF2 412 aa9.07□□□□□ -0.96
CD53-204ENST00000476408 EIF3AQ14152 1382 aaKnown RBP9.07□□□□□ -0.96
CD53-204ENST00000476408 HSPA2P54652 639 aa9.06□□□□□ -0.96
CD53-204ENST00000476408 NGEFQ8N5V2 710 aa9.06□□□□□ -0.96
CD53-204ENST00000476408 TMC1Q8TDI8 760 aa9.06□□□□□ -0.96
CD53-204ENST00000476408 ATP10AO60312 1499 aa9.06□□□□□ -0.96
CD53-204ENST00000476408 ANKRD50Q9ULJ7 1429 aa9.05□□□□□ -0.96
CD53-204ENST00000476408 GPATCH8Q9UKJ3 1502 aaKnown RBP9.05□□□□□ -0.96
CD53-204ENST00000476408 SETD1BQ9UPS6 1966 aaKnown RBP9.05□□□□□ -0.96
CD53-204ENST00000476408 PRKCSHP14314 528 aaPredicted RBP9.05□□□□□ -0.96
CD53-204ENST00000476408 PDE4AP27815 886 aa9.05□□□□□ -0.96
CD53-204ENST00000476408 RCAN3Q9UKA8 241 aa9.05□□□□□ -0.96
CD53-204ENST00000476408 TRPM1Q7Z4N2 1603 aa9.05□□□□□ -0.96
CD53-204ENST00000476408 MAST1Q9Y2H9 1570 aa9.04□□□□□ -0.96
CD53-204ENST00000476408 PRDM15P57071 1507 aaPredicted RBP9.04□□□□□ -0.96
CD53-204ENST00000476408 POGZQ7Z3K3 1410 aa9.04□□□□□ -0.96
CD53-204ENST00000476408 STAC3Q96MF2 364 aa9.03□□□□□ -0.96
CD53-204ENST00000476408 FRMPD1Q5SYB0 1578 aa9.03□□□□□ -0.96
CD53-204ENST00000476408 RICTORQ6R327 1708 aa9.02□□□□□ -0.96
CD53-204ENST00000476408 NPC1L1Q9UHC9 1359 aa9.02□□□□□ -0.97
CD53-204ENST00000476408 NINLQ9Y2I6 1382 aa9.02□□□□□ -0.97
CD53-204ENST00000476408 DCAF8L1A6NGE4 600 aa9.02□□□□□ -0.97
CD53-204ENST00000476408 AAMPQ13685 434 aa9.02□□□□□ -0.97
CD53-204ENST00000476408 RSPH4AQ5TD94 716 aa9.02□□□□□ -0.97
CD53-204ENST00000476408 UNC13BO14795 1591 aa9.02□□□□□ -0.97
CD53-204ENST00000476408 CDC42BPAQ5VT25 1732 aa9.02□□□□□ -0.97
CD53-204ENST00000476408 PLEKHD1A6NEE1 506 aa9.01□□□□□ -0.97
CD53-204ENST00000476408 NEURL4Q96JN8 1562 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms