RNA–Protein interactions for RNA: ENST00000476178.1

SATB1-213, Transcript of SATB homeobox 1, humanhuman

TSL 3

Gene SATB1, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-213ENST00000476178 MIA2Q96PC5 1412 aa13.2□□□□□ -0.3
SATB1-213ENST00000476178 ARHGEF5Q12774 1597 aa13.2□□□□□ -0.3
SATB1-213ENST00000476178 TNRQ92752 1358 aa13.2□□□□□ -0.3
SATB1-213ENST00000476178 ZNF335Q9H4Z2 1342 aaPredicted RBP13.18□□□□□ -0.3
SATB1-213ENST00000476178 CEP170BQ9Y4F5 1589 aaPredicted RBP13.18□□□□□ -0.3
SATB1-213ENST00000476178 MYO3AQ8NEV4 1616 aa13.17□□□□□ -0.3
SATB1-213ENST00000476178 A2ML1A8K2U0 1454 aa13.16□□□□□ -0.3
SATB1-213ENST00000476178 PLA2R1Q13018 1463 aa13.16□□□□□ -0.3
SATB1-213ENST00000476178 THEMISQ8N1K5 641 aaPredicted RBP13.16□□□□□ -0.3
SATB1-213ENST00000476178 KDM5DQ9BY66 1539 aa13.16□□□□□ -0.3
SATB1-213ENST00000476178 LTBP4Q8N2S1 1624 aa13.15□□□□□ -0.3
SATB1-213ENST00000476178 UBAP1LF5GYI3 381 aa13.15□□□□□ -0.3
SATB1-213ENST00000476178 ANKLE2Q86XL3 938 aa13.15□□□□□ -0.3
SATB1-213ENST00000476178 PZPP20742 1482 aa13.14□□□□□ -0.31
SATB1-213ENST00000476178 MAST1Q9Y2H9 1570 aa13.14□□□□□ -0.31
SATB1-213ENST00000476178 ZNF142P52746 1687 aaPredicted RBP13.14□□□□□ -0.31
SATB1-213ENST00000476178 TCOF1Q13428 1488 aaKnown RBP13.13□□□□□ -0.31
SATB1-213ENST00000476178 RRP7BPQ9NSQ0 103 aa13.13□□□□□ -0.31
SATB1-213ENST00000476178 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.12□□□□□ -0.31
SATB1-213ENST00000476178 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.12□□□□□ -0.31
SATB1-213ENST00000476178 FAM135AQ9P2D6 1515 aa13.12□□□□□ -0.31
SATB1-213ENST00000476178 DISP3Q9P2K9 1392 aa13.11□□□□□ -0.31
SATB1-213ENST00000476178 DNMT1P26358 1616 aaKnown RBP13.11□□□□□ -0.31
SATB1-213ENST00000476178 ABCC5O15440 1437 aa13.11□□□□□ -0.31
SATB1-213ENST00000476178 IQSEC2Q5JU85 1478 aa13.1□□□□□ -0.31
SATB1-213ENST00000476178 CHIC2Q9UKJ5 165 aa13.1□□□□□ -0.31
SATB1-213ENST00000476178 FGD6Q6ZV73 1430 aa13.1□□□□□ -0.31
SATB1-213ENST00000476178 PTPN23Q9H3S7 1636 aa13.09□□□□□ -0.31
SATB1-213ENST00000476178 NLRP1Q9C000 1473 aa13.09□□□□□ -0.31
SATB1-213ENST00000476178 SCAF1Q9H7N4 1312 aaKnown RBP13.09□□□□□ -0.31
SATB1-213ENST00000476178 KIF15Q9NS87 1388 aa13.08□□□□□ -0.31
SATB1-213ENST00000476178 UGGT1Q9NYU2 1555 aa13.07□□□□□ -0.32
SATB1-213ENST00000476178 ABCC3O15438 1527 aa13.07□□□□□ -0.32
SATB1-213ENST00000476178 DUOX2Q9NRD8 1548 aa13.07□□□□□ -0.32
SATB1-213ENST00000476178 DAPK1P53355 1430 aa13.06□□□□□ -0.32
SATB1-213ENST00000476178 SHANK2Q9UPX8 1470 aa13.06□□□□□ -0.32
SATB1-213ENST00000476178 PIP4K2BP78356 416 aa13.06□□□□□ -0.32
SATB1-213ENST00000476178 RNF17Q9BXT8 1623 aaKnown RBP13.06□□□□□ -0.32
SATB1-213ENST00000476178 TOM1O60784 492 aa13.05□□□□□ -0.32
SATB1-213ENST00000476178 FAM50AQ14320 339 aaKnown RBP13.05□□□□□ -0.32
SATB1-213ENST00000476178 STAG3Q9UJ98 1225 aa13.05□□□□□ -0.32
SATB1-213ENST00000476178 KANK1Q14678 1352 aa13.05□□□□□ -0.32
SATB1-213ENST00000476178 NPHP4O75161 1426 aaPredicted RBP13.05□□□□□ -0.32
SATB1-213ENST00000476178 EIF2AK4Q9P2K8 1649 aaKnown RBP13.04□□□□□ -0.32
SATB1-213ENST00000476178 ANKRD30AQ9BXX3 1397 aa13.04□□□□□ -0.32
SATB1-213ENST00000476178 ERVK-7P63135 1459 aa13.04□□□□□ -0.32
SATB1-213ENST00000476178 CFAP65Q6ZU64 1925 aaKnown RBP13.03□□□□□ -0.32
SATB1-213ENST00000476178 ERBINQ96RT1 1412 aa13.03□□□□□ -0.32
SATB1-213ENST00000476178 MROH1Q8NDA8 1641 aa13.02□□□□□ -0.32
SATB1-213ENST00000476178 CROCC2H7BZ55 1655 aa13.02□□□□□ -0.32
SATB1-213ENST00000476178 ZC3H13Q5T200 1668 aaKnown RBP13.02□□□□□ -0.32
SATB1-213ENST00000476178 TXNDC2Q86VQ3 553 aa13.02□□□□□ -0.33
SATB1-213ENST00000476178 POLR1AO95602 1720 aaPredicted RBP13.02□□□□□ -0.33
SATB1-213ENST00000476178 EID1Q9Y6B2 187 aa13.01□□□□□ -0.33
SATB1-213ENST00000476178 CPS1P31327 1500 aa13.01□□□□□ -0.33
SATB1-213ENST00000476178 SPATA31D1Q6ZQQ2 1576 aa13.01□□□□□ -0.33
SATB1-213ENST00000476178 NEURL4Q96JN8 1562 aa13.01□□□□□ -0.33
SATB1-213ENST00000476178 ILDR2Q71H61 639 aa13□□□□□ -0.33
SATB1-213ENST00000476178 CEP152O94986 1710 aa12.99□□□□□ -0.33
SATB1-213ENST00000476178 MED14O60244 1454 aa12.99□□□□□ -0.33
SATB1-213ENST00000476178 ARHGAP31Q2M1Z3 1444 aa12.98□□□□□ -0.33
SATB1-213ENST00000476178 LTKP29376 864 aa12.98□□□□□ -0.33
SATB1-213ENST00000476178 HSPA1LP34931 641 aa12.98□□□□□ -0.33
SATB1-213ENST00000476178 SENP3Q9H4L4 574 aaPredicted RBP12.97□□□□□ -0.33
SATB1-213ENST00000476178 DEPDC5O75140 1603 aa12.97□□□□□ -0.33
SATB1-213ENST00000476178 ADGRL2O95490 1459 aa12.97□□□□□ -0.33
SATB1-213ENST00000476178 IDI1Q13907 227 aa12.96□□□□□ -0.33
SATB1-213ENST00000476178 PPARGC1BQ86YN6 1023 aaKnown RBP12.96□□□□□ -0.33
SATB1-213ENST00000476178 PRDM15P57071 1507 aaPredicted RBP12.96□□□□□ -0.33
SATB1-213ENST00000476178 SCAF11Q99590 1463 aaKnown RBP12.96□□□□□ -0.34
SATB1-213ENST00000476178 IQGAP1P46940 1657 aa12.96□□□□□ -0.34
SATB1-213ENST00000476178 VWDEQ8N2E2 1590 aa12.95□□□□□ -0.34
SATB1-213ENST00000476178 BCANQ96GW7 911 aa12.95□□□□□ -0.34
SATB1-213ENST00000476178 SOCS7O14512 581 aa12.93□□□□□ -0.34
SATB1-213ENST00000476178 UBR1Q8IWV7 1749 aa12.93□□□□□ -0.34
SATB1-213ENST00000476178 TMEM2Q9UHN6 1383 aa12.93□□□□□ -0.34
SATB1-213ENST00000476178 ITGAEP38570 1179 aa12.92□□□□□ -0.34
SATB1-213ENST00000476178 ANKRD50Q9ULJ7 1429 aa12.92□□□□□ -0.34
SATB1-213ENST00000476178 LMTK2Q8IWU2 1503 aa12.92□□□□□ -0.34
SATB1-213ENST00000476178 SLC52A1Q9NWF4 448 aa12.91□□□□□ -0.34
SATB1-213ENST00000476178 ARHGAP23Q9P227 1491 aa12.91□□□□□ -0.34
SATB1-213ENST00000476178 SLIT1O75093 1534 aa12.9□□□□□ -0.34
SATB1-213ENST00000476178 LRRC7Q96NW7 1537 aa12.9□□□□□ -0.34
SATB1-213ENST00000476178 SLC26A8Q96RN1 970 aa12.9□□□□□ -0.34
SATB1-213ENST00000476178 PIK3C2BO00750 1634 aa12.89□□□□□ -0.35
SATB1-213ENST00000476178 CHGAP10645 457 aaKnown RBP12.89□□□□□ -0.35
SATB1-213ENST00000476178 HDGFP51858 240 aaKnown RBP12.89□□□□□ -0.35
SATB1-213ENST00000476178 ROCK1Q13464 1354 aa12.89□□□□□ -0.35
SATB1-213ENST00000476178 EFCAB6Q5THR3 1501 aa12.88□□□□□ -0.35
SATB1-213ENST00000476178 PPP1R15AO75807 674 aaPredicted RBP12.88□□□□□ -0.35
SATB1-213ENST00000476178 PROSER2Q86WR7 435 aaPredicted RBP12.88□□□□□ -0.35
SATB1-213ENST00000476178 KCNA6P17658 529 aa12.87□□□□□ -0.35
SATB1-213ENST00000476178 PHF23Q9BUL5 403 aaPredicted RBP12.87□□□□□ -0.35
SATB1-213ENST00000476178 NOS1P29475 1434 aa12.87□□□□□ -0.35
SATB1-213ENST00000476178 STRCP1A6NGW2 1772 aa12.86□□□□□ -0.35
SATB1-213ENST00000476178 RBM33Q96EV2 1170 aaKnown RBP12.85□□□□□ -0.35
SATB1-213ENST00000476178 SYNMO15061 1565 aa12.84□□□□□ -0.35
SATB1-213ENST00000476178 RPRD2Q5VT52 1461 aaKnown RBP12.84□□□□□ -0.35
SATB1-213ENST00000476178 TMEM94Q12767 1356 aa12.83□□□□□ -0.36
SATB1-213ENST00000476178 RRBP1Q9P2E9 1410 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms