RNA–Protein interactions for RNA: ENST00000476018.2

VSTM4-203, Transcript of V-set and transmembrane domain containing 4, humanhuman

TSL 5

Gene VSTM4, Length 659 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-203ENST00000476018 VPS8Q8N3P4 1428 aa20.53■□□□□ 0.88
VSTM4-203ENST00000476018 FAM135AQ9P2D6 1515 aa20.53■□□□□ 0.88
VSTM4-203ENST00000476018 PLA2R1Q13018 1463 aa20.53■□□□□ 0.88
VSTM4-203ENST00000476018 CEP170BQ9Y4F5 1589 aaPredicted RBP20.53■□□□□ 0.88
VSTM4-203ENST00000476018 ARHGEF5Q12774 1597 aa20.51■□□□□ 0.87
VSTM4-203ENST00000476018 IQSEC2Q5JU85 1478 aa20.5■□□□□ 0.87
VSTM4-203ENST00000476018 LRRC9Q6ZRR7 1453 aa20.5■□□□□ 0.87
VSTM4-203ENST00000476018 LTBP4Q8N2S1 1624 aa20.49■□□□□ 0.87
VSTM4-203ENST00000476018 PKD2Q13563 968 aa20.49■□□□□ 0.87
VSTM4-203ENST00000476018 KDM5DQ9BY66 1539 aa20.48■□□□□ 0.87
VSTM4-203ENST00000476018 KIF3BO15066 747 aa20.48■□□□□ 0.87
VSTM4-203ENST00000476018 TSPY4P0CV99 314 aa20.48■□□□□ 0.87
VSTM4-203ENST00000476018 TSPY10P0CW01 314 aa20.48■□□□□ 0.87
VSTM4-203ENST00000476018 DCAF8L1A6NGE4 600 aa20.47■□□□□ 0.87
VSTM4-203ENST00000476018 A2ML1A8K2U0 1454 aa20.46■□□□□ 0.87
VSTM4-203ENST00000476018 TCOF1Q13428 1488 aaKnown RBP20.46■□□□□ 0.87
VSTM4-203ENST00000476018 MAP3K1Q13233 1512 aa20.46■□□□□ 0.87
VSTM4-203ENST00000476018 NCKAP5LQ9HCH0 1330 aa20.45■□□□□ 0.86
VSTM4-203ENST00000476018 PZPP20742 1482 aa20.43■□□□□ 0.86
VSTM4-203ENST00000476018 RNF216Q9NWF9 866 aaPredicted RBP20.43■□□□□ 0.86
VSTM4-203ENST00000476018 WASHC2CQ9Y4E1 1318 aa20.43■□□□□ 0.86
VSTM4-203ENST00000476018 TNRQ92752 1358 aa20.42■□□□□ 0.86
VSTM4-203ENST00000476018 LOC105371045A0A1W2PR82 267 aa20.41■□□□□ 0.86
VSTM4-203ENST00000476018 MAST1Q9Y2H9 1570 aa20.41■□□□□ 0.86
VSTM4-203ENST00000476018 DNMT1P26358 1616 aaKnown RBP20.41■□□□□ 0.86
VSTM4-203ENST00000476018 MIA2Q96PC5 1412 aa20.4■□□□□ 0.86
VSTM4-203ENST00000476018 MYOM3Q5VTT5 1437 aa20.38■□□□□ 0.85
VSTM4-203ENST00000476018 ZNF335Q9H4Z2 1342 aaPredicted RBP20.37■□□□□ 0.85
VSTM4-203ENST00000476018 RNF17Q9BXT8 1623 aaKnown RBP20.37■□□□□ 0.85
VSTM4-203ENST00000476018 EIF2AK4Q9P2K8 1649 aaKnown RBP20.36■□□□□ 0.85
VSTM4-203ENST00000476018 FBXO31Q5XUX0 539 aaPredicted RBP20.36■□□□□ 0.85
VSTM4-203ENST00000476018 NLRP1Q9C000 1473 aa20.36■□□□□ 0.85
VSTM4-203ENST00000476018 ZC3H13Q5T200 1668 aaKnown RBP20.35■□□□□ 0.85
VSTM4-203ENST00000476018 KANK4Q5T7N3 995 aaPredicted RBP20.35■□□□□ 0.85
VSTM4-203ENST00000476018 POLR1AO95602 1720 aaPredicted RBP20.35■□□□□ 0.85
VSTM4-203ENST00000476018 APLP2Q06481 763 aa20.31■□□□□ 0.84
VSTM4-203ENST00000476018 NCBP3Q53F19 620 aaKnown RBP20.31■□□□□ 0.84
VSTM4-203ENST00000476018 THEMISQ8N1K5 641 aaPredicted RBP20.31■□□□□ 0.84
VSTM4-203ENST00000476018 ABCC3O15438 1527 aa20.31■□□□□ 0.84
VSTM4-203ENST00000476018 UGGT1Q9NYU2 1555 aa20.3■□□□□ 0.84
VSTM4-203ENST00000476018 DUOX2Q9NRD8 1548 aa20.3■□□□□ 0.84
VSTM4-203ENST00000476018 ANKLE2Q86XL3 938 aa20.29■□□□□ 0.84
VSTM4-203ENST00000476018 DISP3Q9P2K9 1392 aa20.29■□□□□ 0.84
VSTM4-203ENST00000476018 NEURL4Q96JN8 1562 aa20.29■□□□□ 0.84
VSTM4-203ENST00000476018 SHANK2Q9UPX8 1470 aa20.28■□□□□ 0.84
VSTM4-203ENST00000476018 SPATA31D1Q6ZQQ2 1576 aa20.27■□□□□ 0.84
VSTM4-203ENST00000476018 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.27■□□□□ 0.84
VSTM4-203ENST00000476018 UBAP1LF5GYI3 381 aa20.27■□□□□ 0.84
VSTM4-203ENST00000476018 CPS1P31327 1500 aa20.27■□□□□ 0.83
VSTM4-203ENST00000476018 DEPDC5O75140 1603 aa20.25■□□□□ 0.83
VSTM4-203ENST00000476018 MROH1Q8NDA8 1641 aa20.25■□□□□ 0.83
VSTM4-203ENST00000476018 ERVK-7P63135 1459 aa20.24■□□□□ 0.83
VSTM4-203ENST00000476018 PTPN23Q9H3S7 1636 aa20.24■□□□□ 0.83
VSTM4-203ENST00000476018 CROCC2H7BZ55 1655 aa20.24■□□□□ 0.83
VSTM4-203ENST00000476018 ERBINQ96RT1 1412 aa20.24■□□□□ 0.83
VSTM4-203ENST00000476018 MED14O60244 1454 aa20.24■□□□□ 0.83
VSTM4-203ENST00000476018 KIF15Q9NS87 1388 aa20.23■□□□□ 0.83
VSTM4-203ENST00000476018 NPHP4O75161 1426 aaPredicted RBP20.22■□□□□ 0.83
VSTM4-203ENST00000476018 PRDM15P57071 1507 aaPredicted RBP20.22■□□□□ 0.83
VSTM4-203ENST00000476018 CEP152O94986 1710 aa20.22■□□□□ 0.83
VSTM4-203ENST00000476018 ABCC5O15440 1437 aa20.21■□□□□ 0.83
VSTM4-203ENST00000476018 FGD6Q6ZV73 1430 aa20.19■□□□□ 0.82
VSTM4-203ENST00000476018 IQGAP1P46940 1657 aa20.19■□□□□ 0.82
VSTM4-203ENST00000476018 DAPK1P53355 1430 aa20.19■□□□□ 0.82
VSTM4-203ENST00000476018 ARHGAP31Q2M1Z3 1444 aa20.18■□□□□ 0.82
VSTM4-203ENST00000476018 VWDEQ8N2E2 1590 aa20.17■□□□□ 0.82
VSTM4-203ENST00000476018 TOM1O60784 492 aa20.16■□□□□ 0.82
VSTM4-203ENST00000476018 RRP7BPQ9NSQ0 103 aa20.16■□□□□ 0.82
VSTM4-203ENST00000476018 KANK1Q14678 1352 aa20.15■□□□□ 0.82
VSTM4-203ENST00000476018 UBR1Q8IWV7 1749 aa20.14■□□□□ 0.81
VSTM4-203ENST00000476018 ANKRD30AQ9BXX3 1397 aa20.14■□□□□ 0.81
VSTM4-203ENST00000476018 CFAP65Q6ZU64 1925 aaKnown RBP20.12■□□□□ 0.81
VSTM4-203ENST00000476018 ILDR2Q71H61 639 aa20.11■□□□□ 0.81
VSTM4-203ENST00000476018 SCAF11Q99590 1463 aaKnown RBP20.11■□□□□ 0.81
VSTM4-203ENST00000476018 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.1■□□□□ 0.81
VSTM4-203ENST00000476018 SYNMO15061 1565 aa20.09■□□□□ 0.81
VSTM4-203ENST00000476018 SLIT1O75093 1534 aa20.09■□□□□ 0.81
VSTM4-203ENST00000476018 PIP4K2BP78356 416 aa20.09■□□□□ 0.81
VSTM4-203ENST00000476018 LMTK2Q8IWU2 1503 aa20.08■□□□□ 0.81
VSTM4-203ENST00000476018 ARHGAP23Q9P227 1491 aa20.08■□□□□ 0.81
VSTM4-203ENST00000476018 SOCS7O14512 581 aa20.07■□□□□ 0.8
VSTM4-203ENST00000476018 CHIC2Q9UKJ5 165 aa20.06■□□□□ 0.8
VSTM4-203ENST00000476018 EID1Q9Y6B2 187 aa20.06■□□□□ 0.8
VSTM4-203ENST00000476018 ADGRL2O95490 1459 aa20.05■□□□□ 0.8
VSTM4-203ENST00000476018 KDM5AP29375 1690 aaKnown RBP20.04■□□□□ 0.8
VSTM4-203ENST00000476018 LRRC7Q96NW7 1537 aa20.04■□□□□ 0.8
VSTM4-203ENST00000476018 HSPA1LP34931 641 aa20.04■□□□□ 0.8
VSTM4-203ENST00000476018 TXNDC2Q86VQ3 553 aa20.04■□□□□ 0.8
VSTM4-203ENST00000476018 STAG3Q9UJ98 1225 aa20.04■□□□□ 0.8
VSTM4-203ENST00000476018 PIK3C2BO00750 1634 aa20.04■□□□□ 0.8
VSTM4-203ENST00000476018 STRCP1A6NGW2 1772 aa20.03■□□□□ 0.8
VSTM4-203ENST00000476018 NPM3O75607 178 aaKnown RBP20.02■□□□□ 0.8
VSTM4-203ENST00000476018 TMEM2Q9UHN6 1383 aa20.02■□□□□ 0.8
VSTM4-203ENST00000476018 EFCAB6Q5THR3 1501 aa20.02■□□□□ 0.79
VSTM4-203ENST00000476018 LTKP29376 864 aa20.01■□□□□ 0.79
VSTM4-203ENST00000476018 FAM50AQ14320 339 aaKnown RBP20.01■□□□□ 0.79
VSTM4-203ENST00000476018 ALKQ9UM73 1620 aa19.98■□□□□ 0.79
VSTM4-203ENST00000476018 CACNB1Q02641 598 aaPredicted RBP19.98■□□□□ 0.79
VSTM4-203ENST00000476018 ANKRD50Q9ULJ7 1429 aa19.98■□□□□ 0.79
VSTM4-203ENST00000476018 NOS1P29475 1434 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms