RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 ATP10AO60312 1499 aa9.86□□□□□ -0.83
UBR4-212ENST00000475973 KDM5CP41229 1560 aa9.85□□□□□ -0.83
UBR4-212ENST00000475973 ABCC1P33527 1531 aa9.85□□□□□ -0.83
UBR4-212ENST00000475973 MTUS2Q5JR59 1369 aa9.85□□□□□ -0.83
UBR4-212ENST00000475973 HFM1A2PYH4 1435 aa9.84□□□□□ -0.83
UBR4-212ENST00000475973 MLECQ14165 292 aa9.84□□□□□ -0.83
UBR4-212ENST00000475973 KLHL34Q8N239 644 aa9.84□□□□□ -0.83
UBR4-212ENST00000475973 SPOCK2Q92563 424 aa9.84□□□□□ -0.83
UBR4-212ENST00000475973 SUPT16HQ9Y5B9 1047 aaKnown RBP9.84□□□□□ -0.83
UBR4-212ENST00000475973 PREX2Q70Z35 1606 aa9.84□□□□□ -0.83
UBR4-212ENST00000475973 AFAP1Q8N556 730 aa9.83□□□□□ -0.84
UBR4-212ENST00000475973 MLH3Q9UHC1 1453 aa9.83□□□□□ -0.84
UBR4-212ENST00000475973 FGD6Q6ZV73 1430 aa9.82□□□□□ -0.84
UBR4-212ENST00000475973 PLCB2Q00722 1185 aa9.82□□□□□ -0.84
UBR4-212ENST00000475973 PLEKHH2Q8IVE3 1493 aa9.82□□□□□ -0.84
UBR4-212ENST00000475973 EHBP1L1Q8N3D4 1523 aa9.82□□□□□ -0.84
UBR4-212ENST00000475973 ARHGEF12Q9NZN5 1544 aa9.82□□□□□ -0.84
UBR4-212ENST00000475973 RIMS1Q86UR5 1692 aaKnown RBP9.81□□□□□ -0.84
UBR4-212ENST00000475973 TCOF1Q13428 1488 aaKnown RBP9.81□□□□□ -0.84
UBR4-212ENST00000475973 CCER2I3L3R5 266 aa9.81□□□□□ -0.84
UBR4-212ENST00000475973 YTHDC1Q96MU7 727 aaKnown RBP9.81□□□□□ -0.84
UBR4-212ENST00000475973 ZNF777Q9ULD5 760 aaPredicted RBP9.81□□□□□ -0.84
UBR4-212ENST00000475973 PTPRKQ15262 1439 aa9.81□□□□□ -0.84
UBR4-212ENST00000475973 TRAPPC8Q9Y2L5 1435 aa9.81□□□□□ -0.84
UBR4-212ENST00000475973 REREQ9P2R6 1566 aa9.8□□□□□ -0.84
UBR4-212ENST00000475973 LMTK3Q96Q04 1460 aa9.8□□□□□ -0.84
UBR4-212ENST00000475973 LRRIQ1Q96JM4 1722 aa9.8□□□□□ -0.84
UBR4-212ENST00000475973 ESF1Q9H501 851 aaKnown RBP9.8□□□□□ -0.84
UBR4-212ENST00000475973 CFDP1Q9UEE9 299 aaPredicted RBP9.8□□□□□ -0.84
UBR4-212ENST00000475973 GPATCH8Q9UKJ3 1502 aaKnown RBP9.8□□□□□ -0.84
UBR4-212ENST00000475973 DIP2CQ9Y2E4 1556 aa9.8□□□□□ -0.84
UBR4-212ENST00000475973 PLCD3Q8N3E9 789 aa9.79□□□□□ -0.84
UBR4-212ENST00000475973 KIAA1107Q9UPP5 1409 aa9.79□□□□□ -0.84
UBR4-212ENST00000475973 AGLP35573 1532 aa9.78□□□□□ -0.84
UBR4-212ENST00000475973 SYCP2Q9BX26 1530 aa9.78□□□□□ -0.84
UBR4-212ENST00000475973 CACNB1Q02641 598 aaPredicted RBP9.78□□□□□ -0.84
UBR4-212ENST00000475973 NAIPQ13075 1403 aa9.78□□□□□ -0.84
UBR4-212ENST00000475973 SPAG9O60271 1321 aaKnown RBP9.78□□□□□ -0.84
UBR4-212ENST00000475973 PTPN23Q9H3S7 1636 aa9.78□□□□□ -0.84
UBR4-212ENST00000475973 ITSN2Q9NZM3 1697 aa9.77□□□□□ -0.84
UBR4-212ENST00000475973 SAMD9LQ8IVG5 1584 aa9.77□□□□□ -0.85
UBR4-212ENST00000475973 ABCA6Q8N139 1617 aa9.77□□□□□ -0.85
UBR4-212ENST00000475973 CDC42BPBQ9Y5S2 1711 aa9.76□□□□□ -0.85
UBR4-212ENST00000475973 FER1L4A9Z1Z3 1794 aa9.76□□□□□ -0.85
UBR4-212ENST00000475973 CNTLNQ9NXG0 1405 aa9.76□□□□□ -0.85
UBR4-212ENST00000475973 ILDR1Q86SU0 546 aaPredicted RBP9.76□□□□□ -0.85
UBR4-212ENST00000475973 SIGLEC1Q9BZZ2 1709 aa9.76□□□□□ -0.85
UBR4-212ENST00000475973 MYOM3Q5VTT5 1437 aa9.75□□□□□ -0.85
UBR4-212ENST00000475973 UHRF1BP1Q6BDS2 1440 aa9.75□□□□□ -0.85
UBR4-212ENST00000475973 CDC42BPAQ5VT25 1732 aa9.74□□□□□ -0.85
UBR4-212ENST00000475973 ATP7AQ04656 1500 aa9.74□□□□□ -0.85
UBR4-212ENST00000475973 HNRNPMP52272 730 aaKnown RBP eCLIP9.74□□□□□ -0.85
UBR4-212ENST00000475973 SIN3AQ96ST3 1273 aa9.74□□□□□ -0.85
UBR4-212ENST00000475973 NCOA2Q15596 1464 aa9.73□□□□□ -0.85
UBR4-212ENST00000475973 HSPA2P54652 639 aa9.73□□□□□ -0.85
UBR4-212ENST00000475973 ECM2O94769 699 aaPredicted RBP9.72□□□□□ -0.85
UBR4-212ENST00000475973 TSHZ2Q9NRE2 1034 aa9.72□□□□□ -0.85
UBR4-212ENST00000475973 MIA2Q96PC5 1412 aa9.72□□□□□ -0.85
UBR4-212ENST00000475973 A2MP01023 1474 aa9.72□□□□□ -0.85
UBR4-212ENST00000475973 INO80Q9ULG1 1556 aaPredicted RBP9.71□□□□□ -0.85
UBR4-212ENST00000475973 KIDINS220Q9ULH0 1771 aa9.71□□□□□ -0.85
UBR4-212ENST00000475973 CEBPAP49715 358 aaPredicted RBP9.71□□□□□ -0.86
UBR4-212ENST00000475973 GCC2Q8IWJ2 1684 aa9.71□□□□□ -0.86
UBR4-212ENST00000475973 SUPT6HQ7KZ85 1726 aaKnown RBP9.7□□□□□ -0.86
UBR4-212ENST00000475973 CCDC141Q6ZP82 1450 aa9.7□□□□□ -0.86
UBR4-212ENST00000475973 RTEL1-TNFRSF6BF6WH68 1400 aa9.69□□□□□ -0.86
UBR4-212ENST00000475973 PLXNC1O60486 1568 aa9.69□□□□□ -0.86
UBR4-212ENST00000475973 CAMSAP2Q08AD1 1489 aa9.69□□□□□ -0.86
UBR4-212ENST00000475973 NPATQ14207 1427 aa9.69□□□□□ -0.86
UBR4-212ENST00000475973 RSPH4AQ5TD94 716 aa9.69□□□□□ -0.86
UBR4-212ENST00000475973 PREX1Q8TCU6 1659 aa9.69□□□□□ -0.86
UBR4-212ENST00000475973 FBXO41Q8TF61 875 aa9.69□□□□□ -0.86
UBR4-212ENST00000475973 MBD5Q9P267 1494 aa9.69□□□□□ -0.86
UBR4-212ENST00000475973 ZNF644Q9H582 1327 aaPredicted RBP9.68□□□□□ -0.86
UBR4-212ENST00000475973 PLEKHG5O94827 1062 aa9.67□□□□□ -0.86
UBR4-212ENST00000475973 FAM50AQ14320 339 aaKnown RBP9.67□□□□□ -0.86
UBR4-212ENST00000475973 ZBTB47Q9UFB7 747 aaPredicted RBP9.67□□□□□ -0.86
UBR4-212ENST00000475973 ROCK1Q13464 1354 aa9.66□□□□□ -0.86
UBR4-212ENST00000475973 ITGAEP38570 1179 aa9.66□□□□□ -0.86
UBR4-212ENST00000475973 GGT6Q6P531 493 aa9.66□□□□□ -0.86
UBR4-212ENST00000475973 ZMYM3Q14202 1370 aa9.65□□□□□ -0.86
UBR4-212ENST00000475973 DHX29Q7Z478 1369 aaKnown RBP9.65□□□□□ -0.86
UBR4-212ENST00000475973 TSPY4P0CV99 314 aa9.65□□□□□ -0.86
UBR4-212ENST00000475973 TSPY10P0CW01 314 aa9.65□□□□□ -0.86
UBR4-212ENST00000475973 DDX10Q13206 875 aaKnown RBP9.65□□□□□ -0.86
UBR4-212ENST00000475973 FAM135AQ9P2D6 1515 aa9.65□□□□□ -0.86
UBR4-212ENST00000475973 C3P01024 1663 aa9.64□□□□□ -0.87
UBR4-212ENST00000475973 HAP1P54257 671 aaPredicted RBP9.64□□□□□ -0.87
UBR4-212ENST00000475973 BBXQ8WY36 941 aaPredicted RBP9.64□□□□□ -0.87
UBR4-212ENST00000475973 MROH2AA6NES4 1674 aa9.64□□□□□ -0.87
UBR4-212ENST00000475973 ADGBQ8N7X0 1667 aa9.64□□□□□ -0.87
UBR4-212ENST00000475973 ARHGEF5Q12774 1597 aa9.63□□□□□ -0.87
UBR4-212ENST00000475973 PTPRTO14522 1441 aa9.63□□□□□ -0.87
UBR4-212ENST00000475973 SPATA31E1Q6ZUB1 1445 aa9.63□□□□□ -0.87
UBR4-212ENST00000475973 TONSLQ96HA7 1378 aa9.63□□□□□ -0.87
UBR4-212ENST00000475973 KDM5DQ9BY66 1539 aa9.62□□□□□ -0.87
UBR4-212ENST00000475973 KIF3BO15066 747 aa9.62□□□□□ -0.87
UBR4-212ENST00000475973 RGL2O15211 777 aa9.62□□□□□ -0.87
UBR4-212ENST00000475973 NCOA1Q15788 1441 aa9.62□□□□□ -0.87
UBR4-212ENST00000475973 ERICH6BQ5W0A0 696 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms