RNA–Protein interactions for RNA: ENST00000475916.1

SLF1-204, Transcript of SMC5-SMC6 complex localization factor 1, humanhuman

TSL 2

Gene SLF1, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1-204ENST00000475916 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.2□□□□□ -0.62
SLF1-204ENST00000475916 GPCPD1Q9NPB8 672 aa11.19□□□□□ -0.62
SLF1-204ENST00000475916 METRNQ9UJH8 293 aa11.19□□□□□ -0.62
SLF1-204ENST00000475916 PRIM1P49642 420 aaKnown RBP11.18□□□□□ -0.62
SLF1-204ENST00000475916 PELP1Q8IZL8 1130 aaKnown RBP11.18□□□□□ -0.62
SLF1-204ENST00000475916 CERKQ8TCT0 537 aa11.17□□□□□ -0.62
SLF1-204ENST00000475916 OATP04181 439 aa11.16□□□□□ -0.62
SLF1-204ENST00000475916 MDM2Q00987 491 aaPredicted RBP11.15□□□□□ -0.62
SLF1-204ENST00000475916 CDHR5Q9HBB8 845 aa11.15□□□□□ -0.62
SLF1-204ENST00000475916 MS4A1P11836 297 aa11.14□□□□□ -0.63
SLF1-204ENST00000475916 PCDHGA4Q9Y5G9 962 aa11.14□□□□□ -0.63
SLF1-204ENST00000475916 PCDHGA10Q9Y5H3 936 aa11.14□□□□□ -0.63
SLF1-204ENST00000475916 SH3D19Q5HYK7 790 aa11.13□□□□□ -0.63
SLF1-204ENST00000475916 NPDC1Q9NQX5 325 aaPredicted RBP11.13□□□□□ -0.63
SLF1-204ENST00000475916 SSTR3P32745 418 aaPredicted RBP11.12□□□□□ -0.63
SLF1-204ENST00000475916 JPH4Q96JJ6 628 aa11.12□□□□□ -0.63
SLF1-204ENST00000475916 UBTFP17480 764 aaKnown RBP11.09□□□□□ -0.63
SLF1-204ENST00000475916 SKIV2LQ15477 1246 aaKnown RBP11.09□□□□□ -0.63
SLF1-204ENST00000475916 TSR1Q2NL82 804 aaKnown RBP11.09□□□□□ -0.63
SLF1-204ENST00000475916 POTEFA5A3E0 1075 aa11.08□□□□□ -0.64
SLF1-204ENST00000475916 ARID3AQ99856 593 aa11.08□□□□□ -0.64
SLF1-204ENST00000475916 BEGAINQ9BUH8 593 aa11.08□□□□□ -0.64
SLF1-204ENST00000475916 REPIN1Q9BWE0 567 aaKnown RBP11.08□□□□□ -0.64
SLF1-204ENST00000475916 TMUB1Q9BVT8 246 aa11.07□□□□□ -0.64
SLF1-204ENST00000475916 RIMBP2O15034 1052 aa11.06□□□□□ -0.64
SLF1-204ENST00000475916 DIXDC1Q155Q3 683 aa11.06□□□□□ -0.64
SLF1-204ENST00000475916 ZDHHC16Q969W1 377 aa11.06□□□□□ -0.64
SLF1-204ENST00000475916 APBB1O00213 710 aa11.05□□□□□ -0.64
SLF1-204ENST00000475916 C6orf132Q5T0Z8 1188 aa11.05□□□□□ -0.64
SLF1-204ENST00000475916 METTL3Q86U44 580 aaKnown RBP11.05□□□□□ -0.64
SLF1-204ENST00000475916 ZNF454Q8N9F8 522 aa11.05□□□□□ -0.64
SLF1-204ENST00000475916 RBM46Q8TBY0 533 aaKnown RBP11.04□□□□□ -0.64
SLF1-204ENST00000475916 RBM27Q9P2N5 1060 aaKnown RBP11.04□□□□□ -0.64
SLF1-204ENST00000475916 A6NJR5 290 aa11.03□□□□□ -0.64
SLF1-204ENST00000475916 RAD21O60216 631 aa11.03□□□□□ -0.64
SLF1-204ENST00000475916 FOSBP53539 338 aa11.03□□□□□ -0.64
SLF1-204ENST00000475916 DOK7Q18PE1 504 aa11.03□□□□□ -0.64
SLF1-204ENST00000475916 PADI6Q6TGC4 694 aa11.03□□□□□ -0.64
SLF1-204ENST00000475916 FAM217BQ9NTX9 383 aaPredicted RBP11.03□□□□□ -0.64
SLF1-204ENST00000475916 PXYLP1Q8TE99 480 aa11.01□□□□□ -0.65
SLF1-204ENST00000475916 PHOX2BQ99453 314 aa11.01□□□□□ -0.65
SLF1-204ENST00000475916 ADGRG1Q9Y653 693 aa11.01□□□□□ -0.65
SLF1-204ENST00000475916 POLR3EQ9NVU0 708 aa11□□□□□ -0.65
SLF1-204ENST00000475916 ONECUT3O60422 494 aaPredicted RBP10.99□□□□□ -0.65
SLF1-204ENST00000475916 FAM161AQ3B820 660 aa10.99□□□□□ -0.65
SLF1-204ENST00000475916 ARID3CA6NKF2 412 aa10.97□□□□□ -0.65
SLF1-204ENST00000475916 TRAK2O60296 914 aa10.97□□□□□ -0.65
SLF1-204ENST00000475916 PRSS12P56730 875 aa10.97□□□□□ -0.65
SLF1-204ENST00000475916 MCM6Q14566 821 aa10.97□□□□□ -0.65
SLF1-204ENST00000475916 CLK2P49760 499 aaKnown RBP10.96□□□□□ -0.65
SLF1-204ENST00000475916 ZNF710Q8N1W2 664 aa10.96□□□□□ -0.65
SLF1-204ENST00000475916 CLUAP1Q96AJ1 413 aa10.96□□□□□ -0.65
SLF1-204ENST00000475916 ZSWIM6Q9HCJ5 1215 aa10.96□□□□□ -0.65
SLF1-204ENST00000475916 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.95□□□□□ -0.66
SLF1-204ENST00000475916 KDM4FA0A1W2PPD8 638 aa10.95□□□□□ -0.66
SLF1-204ENST00000475916 PSDA5PKW4 1024 aaPredicted RBP10.95□□□□□ -0.66
SLF1-204ENST00000475916 NUDT7P0C024 238 aa10.95□□□□□ -0.66
SLF1-204ENST00000475916 CDCA7LQ96GN5 454 aa10.95□□□□□ -0.66
SLF1-204ENST00000475916 PPP4R3BQ5MIZ7 849 aa10.94□□□□□ -0.66
SLF1-204ENST00000475916 MYSM1Q5VVJ2 828 aa10.94□□□□□ -0.66
SLF1-204ENST00000475916 PROCA1Q8NCQ7 364 aaPredicted RBP10.94□□□□□ -0.66
SLF1-204ENST00000475916 SULF1Q8IWU6 871 aa10.93□□□□□ -0.66
SLF1-204ENST00000475916 TTC13Q8NBP0 860 aa10.93□□□□□ -0.66
SLF1-204ENST00000475916 NLRP7Q8WX94 980 aa10.93□□□□□ -0.66
SLF1-204ENST00000475916 ADAM33Q9BZ11 813 aa10.93□□□□□ -0.66
SLF1-204ENST00000475916 ARSIQ5FYB1 569 aa10.92□□□□□ -0.66
SLF1-204ENST00000475916 PROSER2Q86WR7 435 aaPredicted RBP10.92□□□□□ -0.66
SLF1-204ENST00000475916 TBC1D2Q9BYX2 928 aa10.92□□□□□ -0.66
SLF1-204ENST00000475916 SPDYE5A6NIY4 337 aa10.91□□□□□ -0.66
SLF1-204ENST00000475916 POTEIP0CG38 1075 aa10.91□□□□□ -0.66
SLF1-204ENST00000475916 TMEM259Q4ZIN3 620 aa10.91□□□□□ -0.66
SLF1-204ENST00000475916 WWC1Q8IX03 1113 aa10.91□□□□□ -0.66
SLF1-204ENST00000475916 BANK1Q8NDB2 785 aa10.91□□□□□ -0.66
SLF1-204ENST00000475916 C1orf115Q9H7X2 142 aa10.91□□□□□ -0.66
SLF1-204ENST00000475916 NUTM1Q86Y26 1132 aa10.9□□□□□ -0.66
SLF1-204ENST00000475916 PRM3Q9NNZ6 103 aa10.9□□□□□ -0.66
SLF1-204ENST00000475916 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.89□□□□□ -0.67
SLF1-204ENST00000475916 PODXL2Q9NZ53 605 aa10.88□□□□□ -0.67
SLF1-204ENST00000475916 RCCD1A6NED2 376 aa10.87□□□□□ -0.67
SLF1-204ENST00000475916 NBPF26B4DH59 902 aa10.87□□□□□ -0.67
SLF1-204ENST00000475916 PTPREP23469 700 aa10.87□□□□□ -0.67
SLF1-204ENST00000475916 RIC3Q7Z5B4 369 aa10.87□□□□□ -0.67
SLF1-204ENST00000475916 PACS2Q86VP3 889 aa10.87□□□□□ -0.67
SLF1-204ENST00000475916 CCDC97Q96F63 343 aaPredicted RBP10.87□□□□□ -0.67
SLF1-204ENST00000475916 KCNH8Q96L42 1107 aa10.87□□□□□ -0.67
SLF1-204ENST00000475916 RFC5P40937 340 aa10.86□□□□□ -0.67
SLF1-204ENST00000475916 RSPH4AQ5TD94 716 aa10.86□□□□□ -0.67
SLF1-204ENST00000475916 CCDC82Q8N4S0 544 aa10.86□□□□□ -0.67
SLF1-204ENST00000475916 SCUBE2Q9NQ36 999 aa10.86□□□□□ -0.67
SLF1-204ENST00000475916 DNAJB2P25686 324 aa10.85□□□□□ -0.67
SLF1-204ENST00000475916 KHSRPQ92945 711 aaKnown RBP eCLIP10.85□□□□□ -0.67
SLF1-204ENST00000475916 SERPINA10Q9UK55 444 aa10.85□□□□□ -0.67
SLF1-204ENST00000475916 ZNF777Q9ULD5 760 aaPredicted RBP10.85□□□□□ -0.67
SLF1-204ENST00000475916 PPP1R3GB7ZBB8 358 aa10.84□□□□□ -0.67
SLF1-204ENST00000475916 PDIA4P13667 645 aaKnown RBP10.84□□□□□ -0.67
SLF1-204ENST00000475916 MAMSTRQ6ZN01 415 aa10.84□□□□□ -0.67
SLF1-204ENST00000475916 BCL2L12Q9HB09 334 aa10.84□□□□□ -0.67
SLF1-204ENST00000475916 DDX11L8A8MPP1 907 aa10.83□□□□□ -0.68
SLF1-204ENST00000475916 GPR153Q6NV75 609 aa10.83□□□□□ -0.68
SLF1-204ENST00000475916 SPIRE2Q8WWL2 714 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms