RNA–Protein interactions for RNA: ENST00000475795.5

UBE4B-208, Transcript of ubiquitination factor E4B, humanhuman

TSL 5

Gene UBE4B, Length 871 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-208ENST00000475795 NCOA2Q15596 1464 aa11.55□□□□□ -0.56
UBE4B-208ENST00000475795 PTPRKQ15262 1439 aa11.54□□□□□ -0.56
UBE4B-208ENST00000475795 LTBP4Q8N2S1 1624 aa11.54□□□□□ -0.56
UBE4B-208ENST00000475795 SLC4A2P04920 1241 aa11.54□□□□□ -0.56
UBE4B-208ENST00000475795 CCDC141Q6ZP82 1450 aa11.54□□□□□ -0.56
UBE4B-208ENST00000475795 CEP170BQ9Y4F5 1589 aaPredicted RBP11.54□□□□□ -0.56
UBE4B-208ENST00000475795 CAMSAP2Q08AD1 1489 aa11.53□□□□□ -0.56
UBE4B-208ENST00000475795 GGT6Q6P531 493 aa11.53□□□□□ -0.56
UBE4B-208ENST00000475795 DHX29Q7Z478 1369 aaKnown RBP11.52□□□□□ -0.57
UBE4B-208ENST00000475795 PLA2R1Q13018 1463 aa11.51□□□□□ -0.57
UBE4B-208ENST00000475795 ARHGEF5Q12774 1597 aa11.51□□□□□ -0.57
UBE4B-208ENST00000475795 IQSEC2Q5JU85 1478 aa11.51□□□□□ -0.57
UBE4B-208ENST00000475795 FAM135AQ9P2D6 1515 aa11.5□□□□□ -0.57
UBE4B-208ENST00000475795 VPS8Q8N3P4 1428 aa11.5□□□□□ -0.57
UBE4B-208ENST00000475795 RSPH4AQ5TD94 716 aa11.49□□□□□ -0.57
UBE4B-208ENST00000475795 TCOF1Q13428 1488 aaKnown RBP11.49□□□□□ -0.57
UBE4B-208ENST00000475795 KDM5DQ9BY66 1539 aa11.49□□□□□ -0.57
UBE4B-208ENST00000475795 DNMT1P26358 1616 aaKnown RBP11.49□□□□□ -0.57
UBE4B-208ENST00000475795 PKD2Q13563 968 aa11.48□□□□□ -0.57
UBE4B-208ENST00000475795 RNF39Q9H2S5 420 aa11.48□□□□□ -0.57
UBE4B-208ENST00000475795 NCKAP5LQ9HCH0 1330 aa11.48□□□□□ -0.57
UBE4B-208ENST00000475795 A2ML1A8K2U0 1454 aa11.48□□□□□ -0.57
UBE4B-208ENST00000475795 LRRC9Q6ZRR7 1453 aa11.48□□□□□ -0.57
UBE4B-208ENST00000475795 POLR1AO95602 1720 aaPredicted RBP11.48□□□□□ -0.57
UBE4B-208ENST00000475795 FOXD4L1Q9NU39 408 aa11.47□□□□□ -0.57
UBE4B-208ENST00000475795 MAST1Q9Y2H9 1570 aa11.46□□□□□ -0.57
UBE4B-208ENST00000475795 MAP3K1Q13233 1512 aa11.46□□□□□ -0.57
UBE4B-208ENST00000475795 PZPP20742 1482 aa11.46□□□□□ -0.57
UBE4B-208ENST00000475795 KIF3BO15066 747 aa11.46□□□□□ -0.57
UBE4B-208ENST00000475795 RNF17Q9BXT8 1623 aaKnown RBP11.46□□□□□ -0.58
UBE4B-208ENST00000475795 TNRQ92752 1358 aa11.44□□□□□ -0.58
UBE4B-208ENST00000475795 ZNF335Q9H4Z2 1342 aaPredicted RBP11.44□□□□□ -0.58
UBE4B-208ENST00000475795 ZC3H13Q5T200 1668 aaKnown RBP11.44□□□□□ -0.58
UBE4B-208ENST00000475795 EIF2AK4Q9P2K8 1649 aaKnown RBP11.44□□□□□ -0.58
UBE4B-208ENST00000475795 NEURL4Q96JN8 1562 aa11.43□□□□□ -0.58
UBE4B-208ENST00000475795 LOC105371045A0A1W2PR82 267 aa11.43□□□□□ -0.58
UBE4B-208ENST00000475795 TSPY4P0CV99 314 aa11.43□□□□□ -0.58
UBE4B-208ENST00000475795 TSPY10P0CW01 314 aa11.43□□□□□ -0.58
UBE4B-208ENST00000475795 U3KPZ7 1027 aaPredicted RBP11.43□□□□□ -0.58
UBE4B-208ENST00000475795 WASHC2CQ9Y4E1 1318 aa11.42□□□□□ -0.58
UBE4B-208ENST00000475795 FBXO31Q5XUX0 539 aaPredicted RBP11.42□□□□□ -0.58
UBE4B-208ENST00000475795 MYOM3Q5VTT5 1437 aa11.42□□□□□ -0.58
UBE4B-208ENST00000475795 MIA2Q96PC5 1412 aa11.42□□□□□ -0.58
UBE4B-208ENST00000475795 NLRP1Q9C000 1473 aa11.41□□□□□ -0.58
UBE4B-208ENST00000475795 KANK4Q5T7N3 995 aaPredicted RBP11.41□□□□□ -0.58
UBE4B-208ENST00000475795 CFAP65Q6ZU64 1925 aaKnown RBP11.41□□□□□ -0.58
UBE4B-208ENST00000475795 ABCC3O15438 1527 aa11.4□□□□□ -0.58
UBE4B-208ENST00000475795 CROCC2H7BZ55 1655 aa11.4□□□□□ -0.58
UBE4B-208ENST00000475795 MROH1Q8NDA8 1641 aa11.4□□□□□ -0.58
UBE4B-208ENST00000475795 SPATA31D1Q6ZQQ2 1576 aa11.4□□□□□ -0.58
UBE4B-208ENST00000475795 CEP152O94986 1710 aa11.4□□□□□ -0.58
UBE4B-208ENST00000475795 UGGT1Q9NYU2 1555 aa11.39□□□□□ -0.59
UBE4B-208ENST00000475795 DISP3Q9P2K9 1392 aa11.39□□□□□ -0.59
UBE4B-208ENST00000475795 DEPDC5O75140 1603 aa11.38□□□□□ -0.59
UBE4B-208ENST00000475795 ZBTB22O15209 634 aa11.38□□□□□ -0.59
UBE4B-208ENST00000475795 DUOX2Q9NRD8 1548 aa11.38□□□□□ -0.59
UBE4B-208ENST00000475795 CPS1P31327 1500 aa11.37□□□□□ -0.59
UBE4B-208ENST00000475795 CACNB1Q02641 598 aaPredicted RBP11.37□□□□□ -0.59
UBE4B-208ENST00000475795 C1QBPQ07021 282 aaKnown RBP11.37□□□□□ -0.59
UBE4B-208ENST00000475795 PTPN23Q9H3S7 1636 aa11.36□□□□□ -0.59
UBE4B-208ENST00000475795 UBAP1LF5GYI3 381 aa11.36□□□□□ -0.59
UBE4B-208ENST00000475795 THEMISQ8N1K5 641 aaPredicted RBP11.36□□□□□ -0.59
UBE4B-208ENST00000475795 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.36□□□□□ -0.59
UBE4B-208ENST00000475795 MED14O60244 1454 aa11.36□□□□□ -0.59
UBE4B-208ENST00000475795 ERVK-7P63135 1459 aa11.36□□□□□ -0.59
UBE4B-208ENST00000475795 SHANK2Q9UPX8 1470 aa11.36□□□□□ -0.59
UBE4B-208ENST00000475795 VWDEQ8N2E2 1590 aa11.36□□□□□ -0.59
UBE4B-208ENST00000475795 IQGAP1P46940 1657 aa11.36□□□□□ -0.59
UBE4B-208ENST00000475795 MYCNP04198 464 aaPredicted RBP11.35□□□□□ -0.59
UBE4B-208ENST00000475795 ANKLE2Q86XL3 938 aa11.35□□□□□ -0.59
UBE4B-208ENST00000475795 UBR1Q8IWV7 1749 aa11.35□□□□□ -0.59
UBE4B-208ENST00000475795 PRDM15P57071 1507 aaPredicted RBP11.35□□□□□ -0.59
UBE4B-208ENST00000475795 ABCC5O15440 1437 aa11.34□□□□□ -0.59
UBE4B-208ENST00000475795 NPHP4O75161 1426 aaPredicted RBP11.34□□□□□ -0.59
UBE4B-208ENST00000475795 ILDR2Q71H61 639 aa11.33□□□□□ -0.6
UBE4B-208ENST00000475795 ERBINQ96RT1 1412 aa11.33□□□□□ -0.6
UBE4B-208ENST00000475795 KIF15Q9NS87 1388 aa11.32□□□□□ -0.6
UBE4B-208ENST00000475795 STRCP1A6NGW2 1772 aa11.32□□□□□ -0.6
UBE4B-208ENST00000475795 APLP2Q06481 763 aa11.31□□□□□ -0.6
UBE4B-208ENST00000475795 DAPK1P53355 1430 aa11.31□□□□□ -0.6
UBE4B-208ENST00000475795 ARHGAP31Q2M1Z3 1444 aa11.31□□□□□ -0.6
UBE4B-208ENST00000475795 FGD6Q6ZV73 1430 aa11.31□□□□□ -0.6
UBE4B-208ENST00000475795 SYNMO15061 1565 aa11.29□□□□□ -0.6
UBE4B-208ENST00000475795 ALKQ9UM73 1620 aa11.28□□□□□ -0.6
UBE4B-208ENST00000475795 ARHGAP23Q9P227 1491 aa11.28□□□□□ -0.6
UBE4B-208ENST00000475795 TOM1O60784 492 aa11.28□□□□□ -0.6
UBE4B-208ENST00000475795 RRP7BPQ9NSQ0 103 aa11.28□□□□□ -0.6
UBE4B-208ENST00000475795 SLIT1O75093 1534 aa11.28□□□□□ -0.6
UBE4B-208ENST00000475795 PIK3C2BO00750 1634 aa11.27□□□□□ -0.6
UBE4B-208ENST00000475795 KDM5AP29375 1690 aaKnown RBP11.27□□□□□ -0.6
UBE4B-208ENST00000475795 SCAF11Q99590 1463 aaKnown RBP11.27□□□□□ -0.6
UBE4B-208ENST00000475795 LMTK2Q8IWU2 1503 aa11.27□□□□□ -0.61
UBE4B-208ENST00000475795 SOCS7O14512 581 aa11.27□□□□□ -0.61
UBE4B-208ENST00000475795 LRRC7Q96NW7 1537 aa11.26□□□□□ -0.61
UBE4B-208ENST00000475795 PIP4K2BP78356 416 aa11.26□□□□□ -0.61
UBE4B-208ENST00000475795 SAMD1Q6SPF0 538 aaPredicted RBP11.26□□□□□ -0.61
UBE4B-208ENST00000475795 KANK1Q14678 1352 aa11.26□□□□□ -0.61
UBE4B-208ENST00000475795 ANKRD30AQ9BXX3 1397 aa11.26□□□□□ -0.61
UBE4B-208ENST00000475795 HSPA1LP34931 641 aa11.25□□□□□ -0.61
UBE4B-208ENST00000475795 ADGRL2O95490 1459 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms