RNA–Protein interactions for RNA: ENST00000475684.2

CCHCR1-212, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5

Gene CCHCR1, Length 786 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-212ENST00000475684 ATP7AQ04656 1500 aa16.75■□□□□ 0.27
CCHCR1-212ENST00000475684 MED14O60244 1454 aa16.74■□□□□ 0.27
CCHCR1-212ENST00000475684 SYCP2Q9BX26 1530 aa16.73■□□□□ 0.27
CCHCR1-212ENST00000475684 STRCP1A6NGW2 1772 aa16.72■□□□□ 0.27
CCHCR1-212ENST00000475684 DEPDC5O75140 1603 aa16.71■□□□□ 0.27
CCHCR1-212ENST00000475684 CDC42BPAQ5VT25 1732 aa16.71■□□□□ 0.27
CCHCR1-212ENST00000475684 LRRIQ1Q96JM4 1722 aa16.71■□□□□ 0.27
CCHCR1-212ENST00000475684 SYNMO15061 1565 aa16.71■□□□□ 0.27
CCHCR1-212ENST00000475684 EEA1Q15075 1411 aa16.7■□□□□ 0.26
CCHCR1-212ENST00000475684 IQGAP1P46940 1657 aa16.7■□□□□ 0.26
CCHCR1-212ENST00000475684 UPF1Q92900 1129 aaKnown RBP eCLIP16.7■□□□□ 0.26
CCHCR1-212ENST00000475684 FAM135AQ9P2D6 1515 aa16.7■□□□□ 0.26
CCHCR1-212ENST00000475684 INO80Q9ULG1 1556 aaPredicted RBP16.69■□□□□ 0.26
CCHCR1-212ENST00000475684 UGGT1Q9NYU2 1555 aa16.68■□□□□ 0.26
CCHCR1-212ENST00000475684 ARHGAP35Q9NRY4 1499 aa16.67■□□□□ 0.26
CCHCR1-212ENST00000475684 EHMT2Q96KQ7 1210 aa16.66■□□□□ 0.26
CCHCR1-212ENST00000475684 MIA2Q96PC5 1412 aa16.66■□□□□ 0.26
CCHCR1-212ENST00000475684 PZPP20742 1482 aa16.66■□□□□ 0.26
CCHCR1-212ENST00000475684 FAM135BQ49AJ0 1406 aa16.65■□□□□ 0.26
CCHCR1-212ENST00000475684 UBTFP17480 764 aaKnown RBP16.65■□□□□ 0.26
CCHCR1-212ENST00000475684 NLRP1Q9C000 1473 aa16.65■□□□□ 0.26
CCHCR1-212ENST00000475684 ADGBQ8N7X0 1667 aa16.65■□□□□ 0.26
CCHCR1-212ENST00000475684 KIAA1107Q9UPP5 1409 aa16.64■□□□□ 0.25
CCHCR1-212ENST00000475684 GPATCH8Q9UKJ3 1502 aaKnown RBP16.63■□□□□ 0.25
CCHCR1-212ENST00000475684 WASHC2CQ9Y4E1 1318 aa16.63■□□□□ 0.25
CCHCR1-212ENST00000475684 PLEKHH2Q8IVE3 1493 aa16.62■□□□□ 0.25
CCHCR1-212ENST00000475684 CCDC18Q5T9S5 1454 aa16.61■□□□□ 0.25
CCHCR1-212ENST00000475684 KIF3BO15066 747 aa16.61■□□□□ 0.25
CCHCR1-212ENST00000475684 CFDP1Q9UEE9 299 aaPredicted RBP16.61■□□□□ 0.25
CCHCR1-212ENST00000475684 TRIM52Q96A61 297 aa16.6■□□□□ 0.25
CCHCR1-212ENST00000475684 KDM5DQ9BY66 1539 aa16.6■□□□□ 0.25
CCHCR1-212ENST00000475684 DHX29Q7Z478 1369 aaKnown RBP16.59■□□□□ 0.25
CCHCR1-212ENST00000475684 SRCAPQ6ZRS2 3230 aa16.57■□□□□ 0.24
CCHCR1-212ENST00000475684 XIRP1Q702N8 1843 aaKnown RBP16.56■□□□□ 0.24
CCHCR1-212ENST00000475684 ZC3H13Q5T200 1668 aaKnown RBP16.56■□□□□ 0.24
CCHCR1-212ENST00000475684 ROBO1Q9Y6N7 1651 aa16.55■□□□□ 0.24
CCHCR1-212ENST00000475684 CASKIN1Q8WXD9 1431 aa16.54■□□□□ 0.24
CCHCR1-212ENST00000475684 ZNF772Q68DY9 489 aaPredicted RBP16.53■□□□□ 0.24
CCHCR1-212ENST00000475684 CCNB3Q8WWL7 1395 aa16.52■□□□□ 0.24
CCHCR1-212ENST00000475684 JCADQ9P266 1359 aa16.52■□□□□ 0.24
CCHCR1-212ENST00000475684 RTEL1-TNFRSF6BF6WH68 1400 aa16.52■□□□□ 0.23
CCHCR1-212ENST00000475684 SCAF11Q99590 1463 aaKnown RBP16.51■□□□□ 0.23
CCHCR1-212ENST00000475684 MEX3CQ5U5Q3 659 aaKnown RBP16.51■□□□□ 0.23
CCHCR1-212ENST00000475684 TXNDC2Q86VQ3 553 aa16.51■□□□□ 0.23
CCHCR1-212ENST00000475684 TMEM94Q12767 1356 aa16.51■□□□□ 0.23
CCHCR1-212ENST00000475684 ZNF644Q9H582 1327 aaPredicted RBP16.5■□□□□ 0.23
CCHCR1-212ENST00000475684 LTKP29376 864 aa16.5■□□□□ 0.23
CCHCR1-212ENST00000475684 RXRBP28702 533 aa16.49■□□□□ 0.23
CCHCR1-212ENST00000475684 PHLPP1O60346 1717 aa16.48■□□□□ 0.23
CCHCR1-212ENST00000475684 MSH5O43196 834 aa16.47■□□□□ 0.23
CCHCR1-212ENST00000475684 PROSER2Q86WR7 435 aaPredicted RBP16.47■□□□□ 0.23
CCHCR1-212ENST00000475684 RBM33Q96EV2 1170 aaKnown RBP16.47■□□□□ 0.23
CCHCR1-212ENST00000475684 LRRC9Q6ZRR7 1453 aa16.47■□□□□ 0.23
CCHCR1-212ENST00000475684 MBD5Q9P267 1494 aa16.47■□□□□ 0.23
CCHCR1-212ENST00000475684 EID1Q9Y6B2 187 aa16.46■□□□□ 0.23
CCHCR1-212ENST00000475684 UBR1Q8IWV7 1749 aa16.45■□□□□ 0.22
CCHCR1-212ENST00000475684 SLAIN2Q9P270 581 aa16.44■□□□□ 0.22
CCHCR1-212ENST00000475684 LRP6O75581 1613 aa16.44■□□□□ 0.22
CCHCR1-212ENST00000475684 SPATA31A6Q5VVP1 1343 aa16.44■□□□□ 0.22
CCHCR1-212ENST00000475684 ERVK-7P63135 1459 aa16.42■□□□□ 0.22
CCHCR1-212ENST00000475684 KCNA6P17658 529 aa16.42■□□□□ 0.22
CCHCR1-212ENST00000475684 NCOA2Q15596 1464 aa16.42■□□□□ 0.22
CCHCR1-212ENST00000475684 FYCO1Q9BQS8 1478 aa16.42■□□□□ 0.22
CCHCR1-212ENST00000475684 ARHGAP23Q9P227 1491 aa16.42■□□□□ 0.22
CCHCR1-212ENST00000475684 MAP3K1Q13233 1512 aa16.41■□□□□ 0.22
CCHCR1-212ENST00000475684 SLIT1O75093 1534 aa16.4■□□□□ 0.22
CCHCR1-212ENST00000475684 MSH6P52701 1360 aa16.39■□□□□ 0.21
CCHCR1-212ENST00000475684 CDK12Q9NYV4 1490 aaPredicted RBP16.39■□□□□ 0.21
CCHCR1-212ENST00000475684 ABCC3O15438 1527 aa16.39■□□□□ 0.21
CCHCR1-212ENST00000475684 COL16A1Q07092 1604 aaPredicted RBP16.37■□□□□ 0.21
CCHCR1-212ENST00000475684 MTUS2Q5JR59 1369 aa16.37■□□□□ 0.21
CCHCR1-212ENST00000475684 CCDC141Q6ZP82 1450 aa16.36■□□□□ 0.21
CCHCR1-212ENST00000475684 SLC26A8Q96RN1 970 aa16.36■□□□□ 0.21
CCHCR1-212ENST00000475684 FGD6Q6ZV73 1430 aa16.36■□□□□ 0.21
CCHCR1-212ENST00000475684 PRDM15P57071 1507 aaPredicted RBP16.35■□□□□ 0.21
CCHCR1-212ENST00000475684 RSPH4AQ5TD94 716 aa16.35■□□□□ 0.21
CCHCR1-212ENST00000475684 ZRANB1Q9UGI0 708 aa16.35■□□□□ 0.21
CCHCR1-212ENST00000475684 TIAM1Q13009 1591 aa16.34■□□□□ 0.21
CCHCR1-212ENST00000475684 NUTM2BA6NNL0 878 aaPredicted RBP16.34■□□□□ 0.21
CCHCR1-212ENST00000475684 NUTM2EB1AL46 878 aaPredicted RBP16.34■□□□□ 0.21
CCHCR1-212ENST00000475684 NUTM2DQ5VT03 806 aaPredicted RBP16.34■□□□□ 0.21
CCHCR1-212ENST00000475684 NUTM2AQ8IVF1 878 aaPredicted RBP16.34■□□□□ 0.21
CCHCR1-212ENST00000475684 STAG3Q9UJ98 1225 aa16.33■□□□□ 0.2
CCHCR1-212ENST00000475684 TMEM2Q9UHN6 1383 aa16.33■□□□□ 0.2
CCHCR1-212ENST00000475684 TSPY4P0CV99 314 aa16.32■□□□□ 0.2
CCHCR1-212ENST00000475684 TSPY10P0CW01 314 aa16.32■□□□□ 0.2
CCHCR1-212ENST00000475684 AFF2P51816 1311 aa16.31■□□□□ 0.2
CCHCR1-212ENST00000475684 NKTRP30414 1462 aaKnown RBP16.3■□□□□ 0.2
CCHCR1-212ENST00000475684 RGS12O14924 1447 aa16.29■□□□□ 0.2
CCHCR1-212ENST00000475684 BCANQ96GW7 911 aa16.29■□□□□ 0.2
CCHCR1-212ENST00000475684 SHPRHQ149N8 1683 aa16.29■□□□□ 0.2
CCHCR1-212ENST00000475684 CFAP65Q6ZU64 1925 aaKnown RBP16.29■□□□□ 0.2
CCHCR1-212ENST00000475684 TET3O43151 1660 aa16.28■□□□□ 0.2
CCHCR1-212ENST00000475684 RBM6P78332 1123 aaKnown RBP16.28■□□□□ 0.2
CCHCR1-212ENST00000475684 QTRT2Q9H974 415 aaKnown RBP16.28■□□□□ 0.2
CCHCR1-212ENST00000475684 CAMSAP2Q08AD1 1489 aa16.27■□□□□ 0.19
CCHCR1-212ENST00000475684 PIK3C2BO00750 1634 aa16.27■□□□□ 0.19
CCHCR1-212ENST00000475684 NWD1Q149M9 1564 aa16.26■□□□□ 0.19
CCHCR1-212ENST00000475684 SETBP1Q9Y6X0 1596 aa16.26■□□□□ 0.19
CCHCR1-212ENST00000475684 CEP152O94986 1710 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms