RNA–Protein interactions for RNA: ENST00000475605.1

CDPF1-206, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 2

Gene CDPF1, Length 655 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-206ENST00000475605 DNMT1P26358 1616 aaKnown RBP25.18■■□□□ 1.62
CDPF1-206ENST00000475605 UBAP1LF5GYI3 381 aa25.16■■□□□ 1.62
CDPF1-206ENST00000475605 SPATA31D1Q6ZQQ2 1576 aa25.16■■□□□ 1.62
CDPF1-206ENST00000475605 TNRQ92752 1358 aa25.14■■□□□ 1.61
CDPF1-206ENST00000475605 RSPH4AQ5TD94 716 aa25.13■■□□□ 1.61
CDPF1-206ENST00000475605 KDM5DQ9BY66 1539 aa25.12■■□□□ 1.61
CDPF1-206ENST00000475605 WASHC2CQ9Y4E1 1318 aa25.12■■□□□ 1.61
CDPF1-206ENST00000475605 PZPP20742 1482 aa25.11■■□□□ 1.61
CDPF1-206ENST00000475605 SOCS7O14512 581 aa25.1■■□□□ 1.61
CDPF1-206ENST00000475605 ARHGEF5Q12774 1597 aa25.08■■□□□ 1.61
CDPF1-206ENST00000475605 NEURL4Q96JN8 1562 aa25.08■■□□□ 1.61
CDPF1-206ENST00000475605 POLR1AO95602 1720 aaPredicted RBP25.06■■□□□ 1.6
CDPF1-206ENST00000475605 TSPY4P0CV99 314 aa25.06■■□□□ 1.6
CDPF1-206ENST00000475605 TSPY10P0CW01 314 aa25.06■■□□□ 1.6
CDPF1-206ENST00000475605 FAM135AQ9P2D6 1515 aa25.06■■□□□ 1.6
CDPF1-206ENST00000475605 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.05■■□□□ 1.6
CDPF1-206ENST00000475605 MIA2Q96PC5 1412 aa25.04■■□□□ 1.6
CDPF1-206ENST00000475605 LOC105371045A0A1W2PR82 267 aa25.04■■□□□ 1.6
CDPF1-206ENST00000475605 LRRC9Q6ZRR7 1453 aa25.03■■□□□ 1.6
CDPF1-206ENST00000475605 VPS8Q8N3P4 1428 aa25.01■■□□□ 1.59
CDPF1-206ENST00000475605 KANK4Q5T7N3 995 aaPredicted RBP25■■□□□ 1.59
CDPF1-206ENST00000475605 ANKLE2Q86XL3 938 aa25■■□□□ 1.59
CDPF1-206ENST00000475605 THEMISQ8N1K5 641 aaPredicted RBP25■■□□□ 1.59
CDPF1-206ENST00000475605 SHANK2Q9UPX8 1470 aa25■■□□□ 1.59
CDPF1-206ENST00000475605 UGGT1Q9NYU2 1555 aa24.98■■□□□ 1.59
CDPF1-206ENST00000475605 NLRP1Q9C000 1473 aa24.98■■□□□ 1.59
CDPF1-206ENST00000475605 SCAF1Q9H7N4 1312 aaKnown RBP24.96■■□□□ 1.59
CDPF1-206ENST00000475605 PIP4K2BP78356 416 aa24.96■■□□□ 1.59
CDPF1-206ENST00000475605 RNF17Q9BXT8 1623 aaKnown RBP24.96■■□□□ 1.59
CDPF1-206ENST00000475605 MAST1Q9Y2H9 1570 aa24.96■■□□□ 1.59
CDPF1-206ENST00000475605 ABCC3O15438 1527 aa24.96■■□□□ 1.59
CDPF1-206ENST00000475605 CPS1P31327 1500 aa24.96■■□□□ 1.59
CDPF1-206ENST00000475605 VWDEQ8N2E2 1590 aa24.94■■□□□ 1.58
CDPF1-206ENST00000475605 NPHP4O75161 1426 aaPredicted RBP24.94■■□□□ 1.58
CDPF1-206ENST00000475605 HSPA1LP34931 641 aa24.93■■□□□ 1.58
CDPF1-206ENST00000475605 MED14O60244 1454 aa24.92■■□□□ 1.58
CDPF1-206ENST00000475605 TOM1O60784 492 aa24.91■■□□□ 1.58
CDPF1-206ENST00000475605 DEPDC5O75140 1603 aa24.9■■□□□ 1.58
CDPF1-206ENST00000475605 MROH1Q8NDA8 1641 aa24.9■■□□□ 1.58
CDPF1-206ENST00000475605 MYOM3Q5VTT5 1437 aa24.89■■□□□ 1.58
CDPF1-206ENST00000475605 ZC3H13Q5T200 1668 aaKnown RBP24.89■■□□□ 1.58
CDPF1-206ENST00000475605 EIF2AK4Q9P2K8 1649 aaKnown RBP24.89■■□□□ 1.57
CDPF1-206ENST00000475605 ERVK-7P63135 1459 aa24.89■■□□□ 1.57
CDPF1-206ENST00000475605 MAP3K1Q13233 1512 aa24.86■■□□□ 1.57
CDPF1-206ENST00000475605 CEP152O94986 1710 aa24.86■■□□□ 1.57
CDPF1-206ENST00000475605 CFAP65Q6ZU64 1925 aaKnown RBP24.86■■□□□ 1.57
CDPF1-206ENST00000475605 IQGAP1P46940 1657 aa24.86■■□□□ 1.57
CDPF1-206ENST00000475605 ALKQ9UM73 1620 aa24.84■■□□□ 1.57
CDPF1-206ENST00000475605 STRCP1A6NGW2 1772 aa24.83■■□□□ 1.57
CDPF1-206ENST00000475605 DUOX2Q9NRD8 1548 aa24.82■■□□□ 1.56
CDPF1-206ENST00000475605 UBR1Q8IWV7 1749 aa24.8■■□□□ 1.56
CDPF1-206ENST00000475605 RRP7BPQ9NSQ0 103 aa24.79■■□□□ 1.56
CDPF1-206ENST00000475605 MED1Q15648 1581 aaPredicted RBP24.79■■□□□ 1.56
CDPF1-206ENST00000475605 KIF15Q9NS87 1388 aa24.79■■□□□ 1.56
CDPF1-206ENST00000475605 ABCC5O15440 1437 aa24.78■■□□□ 1.56
CDPF1-206ENST00000475605 LRRC7Q96NW7 1537 aa24.78■■□□□ 1.56
CDPF1-206ENST00000475605 LTKP29376 864 aa24.76■■□□□ 1.55
CDPF1-206ENST00000475605 SENP3Q9H4L4 574 aaPredicted RBP24.76■■□□□ 1.55
CDPF1-206ENST00000475605 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.75■■□□□ 1.55
CDPF1-206ENST00000475605 PRDM15P57071 1507 aaPredicted RBP24.74■■□□□ 1.55
CDPF1-206ENST00000475605 CROCC2H7BZ55 1655 aa24.74■■□□□ 1.55
CDPF1-206ENST00000475605 PTPN23Q9H3S7 1636 aa24.73■■□□□ 1.55
CDPF1-206ENST00000475605 SCAF11Q99590 1463 aaKnown RBP24.73■■□□□ 1.55
CDPF1-206ENST00000475605 TXNDC2Q86VQ3 553 aa24.73■■□□□ 1.55
CDPF1-206ENST00000475605 ARHGAP31Q2M1Z3 1444 aa24.72■■□□□ 1.55
CDPF1-206ENST00000475605 ERBINQ96RT1 1412 aa24.72■■□□□ 1.55
CDPF1-206ENST00000475605 ARHGAP23Q9P227 1491 aa24.71■■□□□ 1.55
CDPF1-206ENST00000475605 DAPK1P53355 1430 aa24.7■■□□□ 1.55
CDPF1-206ENST00000475605 SYNMO15061 1565 aa24.7■■□□□ 1.54
CDPF1-206ENST00000475605 SLIT1O75093 1534 aa24.7■■□□□ 1.54
CDPF1-206ENST00000475605 APLP2Q06481 763 aa24.68■■□□□ 1.54
CDPF1-206ENST00000475605 CHIC2Q9UKJ5 165 aa24.68■■□□□ 1.54
CDPF1-206ENST00000475605 PIK3C2BO00750 1634 aa24.67■■□□□ 1.54
CDPF1-206ENST00000475605 FGD6Q6ZV73 1430 aa24.65■■□□□ 1.54
CDPF1-206ENST00000475605 EID1Q9Y6B2 187 aa24.64■■□□□ 1.54
CDPF1-206ENST00000475605 KANK1Q14678 1352 aa24.63■■□□□ 1.53
CDPF1-206ENST00000475605 PHF23Q9BUL5 403 aaPredicted RBP24.62■■□□□ 1.53
CDPF1-206ENST00000475605 STAG3Q9UJ98 1225 aa24.62■■□□□ 1.53
CDPF1-206ENST00000475605 TMEM2Q9UHN6 1383 aa24.62■■□□□ 1.53
CDPF1-206ENST00000475605 XIRP1Q702N8 1843 aaKnown RBP24.61■■□□□ 1.53
CDPF1-206ENST00000475605 IDI1Q13907 227 aa24.61■■□□□ 1.53
CDPF1-206ENST00000475605 ANKRD30AQ9BXX3 1397 aa24.6■■□□□ 1.53
CDPF1-206ENST00000475605 LMTK2Q8IWU2 1503 aa24.58■■□□□ 1.53
CDPF1-206ENST00000475605 EFCAB6Q5THR3 1501 aa24.56■■□□□ 1.52
CDPF1-206ENST00000475605 SLC26A8Q96RN1 970 aa24.54■■□□□ 1.52
CDPF1-206ENST00000475605 KDM5AP29375 1690 aaKnown RBP24.53■■□□□ 1.52
CDPF1-206ENST00000475605 NOS1P29475 1434 aa24.52■■□□□ 1.52
CDPF1-206ENST00000475605 RBM33Q96EV2 1170 aaKnown RBP24.51■■□□□ 1.51
CDPF1-206ENST00000475605 TMEM94Q12767 1356 aa24.51■■□□□ 1.51
CDPF1-206ENST00000475605 TET3O43151 1660 aa24.5■■□□□ 1.51
CDPF1-206ENST00000475605 KCNA6P17658 529 aa24.5■■□□□ 1.51
CDPF1-206ENST00000475605 ADGRL2O95490 1459 aa24.48■■□□□ 1.51
CDPF1-206ENST00000475605 FAM50AQ14320 339 aaKnown RBP24.48■■□□□ 1.51
CDPF1-206ENST00000475605 ADGRB3O60242 1522 aa24.47■■□□□ 1.51
CDPF1-206ENST00000475605 PROSER2Q86WR7 435 aaPredicted RBP24.47■■□□□ 1.51
CDPF1-206ENST00000475605 FAM135BQ49AJ0 1406 aa24.46■■□□□ 1.51
CDPF1-206ENST00000475605 RGS17Q9UGC6 210 aaPredicted RBP24.46■■□□□ 1.51
CDPF1-206ENST00000475605 SLC52A1Q9NWF4 448 aa24.44■■□□□ 1.5
CDPF1-206ENST00000475605 ANKRD50Q9ULJ7 1429 aa24.44■■□□□ 1.5
CDPF1-206ENST00000475605 BCANQ96GW7 911 aa24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms