RNA–Protein interactions for RNA: ENST00000475560.5

SRGAP3-205, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 703 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-205ENST00000475560 PLPP6Q8IY26 295 aa8.49□□□□□ -1.05
SRGAP3-205ENST00000475560 PTGER2P43116 358 aa8.48□□□□□ -1.05
SRGAP3-205ENST00000475560 RGS22Q8NE09 1264 aa8.48□□□□□ -1.05
SRGAP3-205ENST00000475560 PLSCR2Q9NRY7 297 aa8.48□□□□□ -1.05
SRGAP3-205ENST00000475560 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.48□□□□□ -1.05
SRGAP3-205ENST00000475560 TTLL13PA6NNM8 815 aa8.47□□□□□ -1.05
SRGAP3-205ENST00000475560 TMUB1Q9BVT8 246 aa8.47□□□□□ -1.05
SRGAP3-205ENST00000475560 PTGDRQ13258 359 aa8.46□□□□□ -1.06
SRGAP3-205ENST00000475560 POTEJP0CG39 1038 aa8.45□□□□□ -1.06
SRGAP3-205ENST00000475560 CLCN1P35523 988 aa8.44□□□□□ -1.06
SRGAP3-205ENST00000475560 PROCA1Q8NCQ7 364 aaPredicted RBP8.44□□□□□ -1.06
SRGAP3-205ENST00000475560 POTEFA5A3E0 1075 aa8.43□□□□□ -1.06
SRGAP3-205ENST00000475560 SSTR3P32745 418 aaPredicted RBP8.43□□□□□ -1.06
SRGAP3-205ENST00000475560 TMCO4Q5TGY1 634 aa8.43□□□□□ -1.06
SRGAP3-205ENST00000475560 DPY19L2Q6NUT2 758 aa8.43□□□□□ -1.06
SRGAP3-205ENST00000475560 MAMSTRQ6ZN01 415 aa8.43□□□□□ -1.06
SRGAP3-205ENST00000475560 MICALL2Q8IY33 904 aa8.43□□□□□ -1.06
SRGAP3-205ENST00000475560 RETREG2Q8NC44 543 aa8.43□□□□□ -1.06
SRGAP3-205ENST00000475560 DDX12PQ92771 950 aa8.43□□□□□ -1.06
SRGAP3-205ENST00000475560 GZF1Q9H116 711 aaPredicted RBP8.43□□□□□ -1.06
SRGAP3-205ENST00000475560 POTEMA6NI47 508 aa8.42□□□□□ -1.06
SRGAP3-205ENST00000475560 SPDYE5A6NIY4 337 aa8.42□□□□□ -1.06
SRGAP3-205ENST00000475560 PRIM1P49642 420 aaKnown RBP8.42□□□□□ -1.06
SRGAP3-205ENST00000475560 IER5LQ5T953 404 aa8.42□□□□□ -1.06
SRGAP3-205ENST00000475560 ATP1B4Q9UN42 357 aaPredicted RBP8.42□□□□□ -1.06
SRGAP3-205ENST00000475560 MTMR7Q9Y216 660 aa8.42□□□□□ -1.06
SRGAP3-205ENST00000475560 COG6Q9Y2V7 657 aa8.42□□□□□ -1.06
SRGAP3-205ENST00000475560 IRF5Q13568 498 aa8.41□□□□□ -1.06
SRGAP3-205ENST00000475560 GPCPD1Q9NPB8 672 aa8.41□□□□□ -1.06
SRGAP3-205ENST00000475560 TRIM35Q9UPQ4 493 aa8.41□□□□□ -1.06
SRGAP3-205ENST00000475560 ZNF330Q9Y3S2 320 aaPredicted RBP8.41□□□□□ -1.06
SRGAP3-205ENST00000475560 C2orf72A6NCS6 295 aa8.4□□□□□ -1.06
SRGAP3-205ENST00000475560 MFAP1P55081 439 aaKnown RBP8.4□□□□□ -1.06
SRGAP3-205ENST00000475560 POLR3EQ9NVU0 708 aa8.4□□□□□ -1.06
SRGAP3-205ENST00000475560 KIF3CO14782 793 aa8.39□□□□□ -1.07
SRGAP3-205ENST00000475560 MDM2Q00987 491 aaPredicted RBP8.39□□□□□ -1.07
SRGAP3-205ENST00000475560 POTEGQ6S5H5 508 aa8.39□□□□□ -1.07
SRGAP3-205ENST00000475560 BANK1Q8NDB2 785 aa8.39□□□□□ -1.07
SRGAP3-205ENST00000475560 BEGAINQ9BUH8 593 aa8.39□□□□□ -1.07
SRGAP3-205ENST00000475560 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.39□□□□□ -1.07
SRGAP3-205ENST00000475560 ACIN1Q9UKV3 1341 aaKnown RBP8.38□□□□□ -1.07
SRGAP3-205ENST00000475560 TBC1D12O60347 775 aa8.38□□□□□ -1.07
SRGAP3-205ENST00000475560 PPP1R15AO75807 674 aaPredicted RBP8.38□□□□□ -1.07
SRGAP3-205ENST00000475560 UPF1Q92900 1129 aaKnown RBP eCLIP8.38□□□□□ -1.07
SRGAP3-205ENST00000475560 SCUBE2Q9NQ36 999 aa8.37□□□□□ -1.07
SRGAP3-205ENST00000475560 SNRKQ9NRH2 765 aa8.37□□□□□ -1.07
SRGAP3-205ENST00000475560 COLQQ9Y215 455 aaPredicted RBP8.37□□□□□ -1.07
SRGAP3-205ENST00000475560 SEC24BO95487 1268 aa8.36□□□□□ -1.07
SRGAP3-205ENST00000475560 PHOX2BQ99453 314 aa8.36□□□□□ -1.07
SRGAP3-205ENST00000475560 LOC105371045A0A1W2PR82 267 aa8.35□□□□□ -1.07
SRGAP3-205ENST00000475560 PDE4CQ08493 712 aa8.35□□□□□ -1.07
SRGAP3-205ENST00000475560 TMEM121BQ9BXQ6 578 aaPredicted RBP8.35□□□□□ -1.07
SRGAP3-205ENST00000475560 NPDC1Q9NQX5 325 aaPredicted RBP8.35□□□□□ -1.07
SRGAP3-205ENST00000475560 EVI5O60447 810 aa8.34□□□□□ -1.07
SRGAP3-205ENST00000475560 FOXD4L5Q5VV16 416 aaPredicted RBP8.34□□□□□ -1.07
SRGAP3-205ENST00000475560 FOXD4L4Q8WXT5 416 aaPredicted RBP8.34□□□□□ -1.07
SRGAP3-205ENST00000475560 RFC5P40937 340 aa8.33□□□□□ -1.08
SRGAP3-205ENST00000475560 MYSM1Q5VVJ2 828 aa8.33□□□□□ -1.08
SRGAP3-205ENST00000475560 FAM217BQ9NTX9 383 aaPredicted RBP8.33□□□□□ -1.08
SRGAP3-205ENST00000475560 TMEM259Q4ZIN3 620 aa8.32□□□□□ -1.08
SRGAP3-205ENST00000475560 FBXW7Q969H0 707 aa8.32□□□□□ -1.08
SRGAP3-205ENST00000475560 PCDH10Q9P2E7 1040 aa8.32□□□□□ -1.08
SRGAP3-205ENST00000475560 RBM25P49756 843 aaKnown RBP8.31□□□□□ -1.08
SRGAP3-205ENST00000475560 CLK2P49760 499 aaKnown RBP8.31□□□□□ -1.08
SRGAP3-205ENST00000475560 IRX5P78411 483 aaPredicted RBP8.3□□□□□ -1.08
SRGAP3-205ENST00000475560 PDCD7Q8N8D1 485 aaKnown RBP8.3□□□□□ -1.08
SRGAP3-205ENST00000475560 ZNF428Q96B54 188 aa8.3□□□□□ -1.08
SRGAP3-205ENST00000475560 FAM163AQ96GL9 167 aaPredicted RBP8.3□□□□□ -1.08
SRGAP3-205ENST00000475560 CALR3Q96L12 384 aaKnown RBP8.3□□□□□ -1.08
SRGAP3-205ENST00000475560 BOLA1Q9Y3E2 137 aa8.3□□□□□ -1.08
SRGAP3-205ENST00000475560 PATL2C9JE40 543 aaKnown RBP8.29□□□□□ -1.08
SRGAP3-205ENST00000475560 PLCG2P16885 1265 aa8.29□□□□□ -1.08
SRGAP3-205ENST00000475560 LCE2DQ5TA82 110 aaPredicted RBP8.29□□□□□ -1.08
SRGAP3-205ENST00000475560 WWC1Q8IX03 1113 aa8.29□□□□□ -1.08
SRGAP3-205ENST00000475560 CDHR5Q9HBB8 845 aa8.29□□□□□ -1.08
SRGAP3-205ENST00000475560 GDPD2Q9HCC8 539 aa8.29□□□□□ -1.08
SRGAP3-205ENST00000475560 SHROOM4Q9ULL8 1493 aa8.29□□□□□ -1.08
SRGAP3-205ENST00000475560 G3V3G9 751 aa8.28□□□□□ -1.08
SRGAP3-205ENST00000475560 FBXO31Q5XUX0 539 aaPredicted RBP8.28□□□□□ -1.08
SRGAP3-205ENST00000475560 PPP2R2DQ66LE6 453 aa8.28□□□□□ -1.08
SRGAP3-205ENST00000475560 DIXDC1Q155Q3 683 aa8.27□□□□□ -1.09
SRGAP3-205ENST00000475560 TBC1D2Q9BYX2 928 aa8.27□□□□□ -1.09
SRGAP3-205ENST00000475560 ANO8Q9HCE9 1232 aaPredicted RBP8.27□□□□□ -1.09
SRGAP3-205ENST00000475560 OATP04181 439 aa8.26□□□□□ -1.09
SRGAP3-205ENST00000475560 EN1Q05925 392 aaPredicted RBP8.26□□□□□ -1.09
SRGAP3-205ENST00000475560 OCEL1Q9H607 264 aa8.26□□□□□ -1.09
SRGAP3-205ENST00000475560 E9PSI1 815 aa8.25□□□□□ -1.09
SRGAP3-205ENST00000475560 IGSF3O75054 1194 aa8.25□□□□□ -1.09
SRGAP3-205ENST00000475560 KCNA1Q09470 495 aa8.25□□□□□ -1.09
SRGAP3-205ENST00000475560 MTMR14Q8NCE2 650 aa8.25□□□□□ -1.09
SRGAP3-205ENST00000475560 EPAS1Q99814 870 aa8.25□□□□□ -1.09
SRGAP3-205ENST00000475560 MAP3K7O43318 606 aa8.24□□□□□ -1.09
SRGAP3-205ENST00000475560 PHF14O94880 888 aa8.24□□□□□ -1.09
SRGAP3-205ENST00000475560 BRD1O95696 1058 aa8.24□□□□□ -1.09
SRGAP3-205ENST00000475560 METTL3Q86U44 580 aaKnown RBP8.24□□□□□ -1.09
SRGAP3-205ENST00000475560 NLRP7Q8WX94 980 aa8.24□□□□□ -1.09
SRGAP3-205ENST00000475560 GLMNQ92990 594 aa8.24□□□□□ -1.09
SRGAP3-205ENST00000475560 PRM3Q9NNZ6 103 aa8.24□□□□□ -1.09
SRGAP3-205ENST00000475560 POM121CA8CG34 1229 aa8.23□□□□□ -1.09
SRGAP3-205ENST00000475560 FAM161AQ3B820 660 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms