RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 RNF17Q9BXT8 1623 aaKnown RBP24.24■■□□□ 1.47
CPSF3-203ENST00000475482 KDM5DQ9BY66 1539 aa24.23■■□□□ 1.47
CPSF3-203ENST00000475482 EIF2AK4Q9P2K8 1649 aaKnown RBP24.23■■□□□ 1.47
CPSF3-203ENST00000475482 DNMT1P26358 1616 aaKnown RBP24.22■■□□□ 1.47
CPSF3-203ENST00000475482 ZNF142P52746 1687 aaPredicted RBP24.21■■□□□ 1.47
CPSF3-203ENST00000475482 DAPK1P53355 1430 aa24.2■■□□□ 1.46
CPSF3-203ENST00000475482 MYO3AQ8NEV4 1616 aa24.2■■□□□ 1.46
CPSF3-203ENST00000475482 DUOX2Q9NRD8 1548 aa24.2■■□□□ 1.46
CPSF3-203ENST00000475482 MROH1Q8NDA8 1641 aa24.17■■□□□ 1.46
CPSF3-203ENST00000475482 PZPP20742 1482 aa24.17■■□□□ 1.46
CPSF3-203ENST00000475482 NCOA1Q15788 1441 aa24.17■■□□□ 1.46
CPSF3-203ENST00000475482 WASHC2CQ9Y4E1 1318 aa24.16■■□□□ 1.46
CPSF3-203ENST00000475482 DMRT2Q9Y5R5 561 aa24.16■■□□□ 1.46
CPSF3-203ENST00000475482 CEP170BQ9Y4F5 1589 aaPredicted RBP24.15■■□□□ 1.46
CPSF3-203ENST00000475482 PTPRTO14522 1441 aa24.14■■□□□ 1.45
CPSF3-203ENST00000475482 ZC3H13Q5T200 1668 aaKnown RBP24.14■■□□□ 1.45
CPSF3-203ENST00000475482 KIF15Q9NS87 1388 aa24.14■■□□□ 1.45
CPSF3-203ENST00000475482 ABCC3O15438 1527 aa24.13■■□□□ 1.45
CPSF3-203ENST00000475482 CAMSAP1Q5T5Y3 1602 aa24.13■■□□□ 1.45
CPSF3-203ENST00000475482 ERBINQ96RT1 1412 aa24.12■■□□□ 1.45
CPSF3-203ENST00000475482 FBXO31Q5XUX0 539 aaPredicted RBP24.11■■□□□ 1.45
CPSF3-203ENST00000475482 PLA2R1Q13018 1463 aa24.1■■□□□ 1.45
CPSF3-203ENST00000475482 A2ML1A8K2U0 1454 aa24.09■■□□□ 1.45
CPSF3-203ENST00000475482 TNRQ92752 1358 aa24.08■■□□□ 1.45
CPSF3-203ENST00000475482 FBXO41Q8TF61 875 aa24.08■■□□□ 1.45
CPSF3-203ENST00000475482 RRP7BPQ9NSQ0 103 aa24.08■■□□□ 1.45
CPSF3-203ENST00000475482 ADGRL2O95490 1459 aa24.07■■□□□ 1.44
CPSF3-203ENST00000475482 PRDM15P57071 1507 aaPredicted RBP24.07■■□□□ 1.44
CPSF3-203ENST00000475482 DEPDC5O75140 1603 aa24.06■■□□□ 1.44
CPSF3-203ENST00000475482 ANKRD30AQ9BXX3 1397 aa24.06■■□□□ 1.44
CPSF3-203ENST00000475482 CEP152O94986 1710 aa24.04■■□□□ 1.44
CPSF3-203ENST00000475482 SPATA31D1Q6ZQQ2 1576 aa24.04■■□□□ 1.44
CPSF3-203ENST00000475482 PKD2Q13563 968 aa24.02■■□□□ 1.44
CPSF3-203ENST00000475482 CERKQ8TCT0 537 aa24.02■■□□□ 1.44
CPSF3-203ENST00000475482 CHIC2Q9UKJ5 165 aa24.02■■□□□ 1.44
CPSF3-203ENST00000475482 NLRP1Q9C000 1473 aa24.01■■□□□ 1.43
CPSF3-203ENST00000475482 FAM50AQ14320 339 aaKnown RBP24■■□□□ 1.43
CPSF3-203ENST00000475482 ARHGAP31Q2M1Z3 1444 aa24■■□□□ 1.43
CPSF3-203ENST00000475482 NCKAP5LQ9HCH0 1330 aa23.99■■□□□ 1.43
CPSF3-203ENST00000475482 ERVK-7P63135 1459 aa23.99■■□□□ 1.43
CPSF3-203ENST00000475482 VWDEQ8N2E2 1590 aa23.99■■□□□ 1.43
CPSF3-203ENST00000475482 CFAP65Q6ZU64 1925 aaKnown RBP23.97■■□□□ 1.43
CPSF3-203ENST00000475482 LTBP4Q8N2S1 1624 aa23.97■■□□□ 1.43
CPSF3-203ENST00000475482 LMTK2Q8IWU2 1503 aa23.95■■□□□ 1.43
CPSF3-203ENST00000475482 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.94■■□□□ 1.42
CPSF3-203ENST00000475482 UGGT1Q9NYU2 1555 aa23.93■■□□□ 1.42
CPSF3-203ENST00000475482 POLR1AO95602 1720 aaPredicted RBP23.93■■□□□ 1.42
CPSF3-203ENST00000475482 NEURL4Q96JN8 1562 aa23.91■■□□□ 1.42
CPSF3-203ENST00000475482 THEMISQ8N1K5 641 aaPredicted RBP23.91■■□□□ 1.42
CPSF3-203ENST00000475482 ANKRD50Q9ULJ7 1429 aa23.91■■□□□ 1.42
CPSF3-203ENST00000475482 KANK1Q14678 1352 aa23.91■■□□□ 1.42
CPSF3-203ENST00000475482 ROCK1Q13464 1354 aa23.9■■□□□ 1.42
CPSF3-203ENST00000475482 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.89■■□□□ 1.411e-6■■□□□ 12.4
CPSF3-203ENST00000475482 UBR1Q8IWV7 1749 aa23.86■■□□□ 1.41
CPSF3-203ENST00000475482 MED14O60244 1454 aa23.86■■□□□ 1.41
CPSF3-203ENST00000475482 PPARGC1BQ86YN6 1023 aaKnown RBP23.85■■□□□ 1.41
CPSF3-203ENST00000475482 IQSEC2Q5JU85 1478 aa23.85■■□□□ 1.41
CPSF3-203ENST00000475482 ANKLE2Q86XL3 938 aa23.84■■□□□ 1.41
CPSF3-203ENST00000475482 EFCAB6Q5THR3 1501 aa23.84■■□□□ 1.41
CPSF3-203ENST00000475482 ZNF335Q9H4Z2 1342 aaPredicted RBP23.83■■□□□ 1.4
CPSF3-203ENST00000475482 UNC13BO14795 1591 aa23.82■■□□□ 1.4
CPSF3-203ENST00000475482 NOS1P29475 1434 aa23.81■■□□□ 1.4
CPSF3-203ENST00000475482 RRBP1Q9P2E9 1410 aaKnown RBP23.81■■□□□ 1.4
CPSF3-203ENST00000475482 KDM5AP29375 1690 aaKnown RBP23.79■■□□□ 1.4
CPSF3-203ENST00000475482 SYNMO15061 1565 aa23.78■■□□□ 1.4
CPSF3-203ENST00000475482 RPRD2Q5VT52 1461 aaKnown RBP23.78■■□□□ 1.4
CPSF3-203ENST00000475482 ARHGAP23Q9P227 1491 aa23.78■■□□□ 1.4
CPSF3-203ENST00000475482 SLIT1O75093 1534 aa23.78■■□□□ 1.4
CPSF3-203ENST00000475482 PIK3C2BO00750 1634 aa23.77■■□□□ 1.4
CPSF3-203ENST00000475482 NPHP4O75161 1426 aaPredicted RBP23.77■■□□□ 1.4
CPSF3-203ENST00000475482 TET3O43151 1660 aa23.77■■□□□ 1.4
CPSF3-203ENST00000475482 IQGAP1P46940 1657 aa23.75■■□□□ 1.39
CPSF3-203ENST00000475482 GCC2Q8IWJ2 1684 aa23.74■■□□□ 1.39
CPSF3-203ENST00000475482 IDI1Q13907 227 aa23.74■■□□□ 1.39
CPSF3-203ENST00000475482 IQGAP3Q86VI3 1631 aa23.71■■□□□ 1.39
CPSF3-203ENST00000475482 SCAF11Q99590 1463 aaKnown RBP23.71■■□□□ 1.39
CPSF3-203ENST00000475482 LTKP29376 864 aa23.7■■□□□ 1.38
CPSF3-203ENST00000475482 ITGAEP38570 1179 aa23.7■■□□□ 1.38
CPSF3-203ENST00000475482 SLC52A1Q9NWF4 448 aa23.7■■□□□ 1.38
CPSF3-203ENST00000475482 CPS1P31327 1500 aa23.69■■□□□ 1.38
CPSF3-203ENST00000475482 TMEM2Q9UHN6 1383 aa23.69■■□□□ 1.38
CPSF3-203ENST00000475482 E9PCH4 1651 aa23.67■■□□□ 1.38
CPSF3-203ENST00000475482 TXNDC2Q86VQ3 553 aa23.66■■□□□ 1.38
CPSF3-203ENST00000475482 ADGRB3O60242 1522 aa23.65■■□□□ 1.38
CPSF3-203ENST00000475482 TRIM26Q12899 539 aaPredicted RBP23.64■■□□□ 1.37
CPSF3-203ENST00000475482 STRCP1A6NGW2 1772 aa23.64■■□□□ 1.37
CPSF3-203ENST00000475482 NUP155O75694 1391 aa23.63■■□□□ 1.37
CPSF3-203ENST00000475482 STAG3Q9UJ98 1225 aa23.61■■□□□ 1.37
CPSF3-203ENST00000475482 EID1Q9Y6B2 187 aa23.61■■□□□ 1.37
CPSF3-203ENST00000475482 NAIPQ13075 1403 aa23.6■■□□□ 1.37
CPSF3-203ENST00000475482 TMEM131LA2VDJ0 1609 aa23.59■■□□□ 1.37
CPSF3-203ENST00000475482 MYO5BQ9ULV0 1848 aa23.59■■□□□ 1.37
CPSF3-203ENST00000475482 ZFYVE9O95405 1425 aa23.56■■□□□ 1.36
CPSF3-203ENST00000475482 UBAP1LF5GYI3 381 aa23.55■■□□□ 1.36
CPSF3-203ENST00000475482 LRRC7Q96NW7 1537 aa23.54■■□□□ 1.36
CPSF3-203ENST00000475482 HFM1A2PYH4 1435 aa23.54■■□□□ 1.36
CPSF3-203ENST00000475482 ALKQ9UM73 1620 aa23.5■■□□□ 1.35
CPSF3-203ENST00000475482 SPHKAPQ2M3C7 1700 aa23.49■■□□□ 1.35
CPSF3-203ENST00000475482 RIMS2Q9UQ26 1411 aa23.48■■□□□ 1.35
CPSF3-203ENST00000475482 PLEKHG1Q9ULL1 1385 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms