RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 BCORL1Q5H9F3 1711 aa19.97■□□□□ 0.79
TRAF4-210ENST00000475329 SIN3AQ96ST3 1273 aa19.96■□□□□ 0.79
TRAF4-210ENST00000475329 DIP2CQ9Y2E4 1556 aa19.95■□□□□ 0.78
TRAF4-210ENST00000475329 DHX29Q7Z478 1369 aaKnown RBP19.95■□□□□ 0.78
TRAF4-210ENST00000475329 RNF17Q9BXT8 1623 aaKnown RBP19.94■□□□□ 0.78
TRAF4-210ENST00000475329 A2MP01023 1474 aa19.94■□□□□ 0.78
TRAF4-210ENST00000475329 NEUROD1Q13562 356 aa19.94■□□□□ 0.78
TRAF4-210ENST00000475329 TIMELESSQ9UNS1 1208 aa19.94■□□□□ 0.78
TRAF4-210ENST00000475329 ANKRD30BQ9BXX2 1392 aa19.93■□□□□ 0.78
TRAF4-210ENST00000475329 PRDM15P57071 1507 aaPredicted RBP19.92■□□□□ 0.78
TRAF4-210ENST00000475329 MROH1Q8NDA8 1641 aa19.91■□□□□ 0.78
TRAF4-210ENST00000475329 TET3O43151 1660 aa19.91■□□□□ 0.78
TRAF4-210ENST00000475329 RAPGEF3O95398 923 aa19.9■□□□□ 0.78
TRAF4-210ENST00000475329 PKD2Q13563 968 aa19.9■□□□□ 0.78
TRAF4-210ENST00000475329 FOXD1Q16676 465 aa19.9■□□□□ 0.78
TRAF4-210ENST00000475329 TONSLQ96HA7 1378 aa19.9■□□□□ 0.78
TRAF4-210ENST00000475329 VWDEQ8N2E2 1590 aa19.9■□□□□ 0.78
TRAF4-210ENST00000475329 RPRD2Q5VT52 1461 aaKnown RBP19.89■□□□□ 0.77
TRAF4-210ENST00000475329 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.87■□□□□ 0.779e-7■■■□□ 14.9
TRAF4-210ENST00000475329 E9PCH4 1651 aa19.87■□□□□ 0.77
TRAF4-210ENST00000475329 CEP152O94986 1710 aa19.86■□□□□ 0.77
TRAF4-210ENST00000475329 KANK1Q14678 1352 aa19.85■□□□□ 0.77
TRAF4-210ENST00000475329 REREQ9P2R6 1566 aa19.83■□□□□ 0.77
TRAF4-210ENST00000475329 SPHKAPQ2M3C7 1700 aa19.83■□□□□ 0.77
TRAF4-210ENST00000475329 KIF3BO15066 747 aa19.83■□□□□ 0.77
TRAF4-210ENST00000475329 YEATS2Q9ULM3 1422 aa19.83■□□□□ 0.76
TRAF4-210ENST00000475329 ARHGEF40Q8TER5 1519 aa19.81■□□□□ 0.76
TRAF4-210ENST00000475329 ZC3H13Q5T200 1668 aaKnown RBP19.8■□□□□ 0.76
TRAF4-210ENST00000475329 EFCAB6Q5THR3 1501 aa19.79■□□□□ 0.76
TRAF4-210ENST00000475329 LMTK2Q8IWU2 1503 aa19.79■□□□□ 0.76
TRAF4-210ENST00000475329 ATP10AO60312 1499 aa19.78■□□□□ 0.76
TRAF4-210ENST00000475329 COL17A1Q9UMD9 1497 aaPredicted RBP19.77■□□□□ 0.76
TRAF4-210ENST00000475329 PPP1R15AO75807 674 aaPredicted RBP19.76■□□□□ 0.75
TRAF4-210ENST00000475329 CAMSAP1Q5T5Y3 1602 aa19.76■□□□□ 0.75
TRAF4-210ENST00000475329 TRPM2O94759 1503 aa19.75■□□□□ 0.75
TRAF4-210ENST00000475329 AEBP2Q6ZN18 517 aaPredicted RBP19.74■□□□□ 0.75
TRAF4-210ENST00000475329 CCDC144AA2RUR9 1427 aa19.74■□□□□ 0.75
TRAF4-210ENST00000475329 ABCC3O15438 1527 aa19.73■□□□□ 0.75
TRAF4-210ENST00000475329 AGLP35573 1532 aa19.73■□□□□ 0.75
TRAF4-210ENST00000475329 PLA2R1Q13018 1463 aa19.73■□□□□ 0.75
TRAF4-210ENST00000475329 SIGLEC1Q9BZZ2 1709 aa19.71■□□□□ 0.75
TRAF4-210ENST00000475329 CLTCL1P53675 1640 aa19.69■□□□□ 0.74
TRAF4-210ENST00000475329 ZNF316A6NFI3 1004 aaPredicted RBP19.69■□□□□ 0.74
TRAF4-210ENST00000475329 L3MBTL2Q969R5 705 aa19.69■□□□□ 0.74
TRAF4-210ENST00000475329 PTPRTO14522 1441 aa19.68■□□□□ 0.74
TRAF4-210ENST00000475329 GGT6Q6P531 493 aa19.67■□□□□ 0.74
TRAF4-210ENST00000475329 KIF1BO60333 1816 aa19.67■□□□□ 0.74
TRAF4-210ENST00000475329 CFAP65Q6ZU64 1925 aaKnown RBP19.66■□□□□ 0.74
TRAF4-210ENST00000475329 WASHC2CQ9Y4E1 1318 aa19.62■□□□□ 0.73
TRAF4-210ENST00000475329 CLTCQ00610 1675 aaKnown RBP19.62■□□□□ 0.73
TRAF4-210ENST00000475329 NEURL4Q96JN8 1562 aa19.61■□□□□ 0.73
TRAF4-210ENST00000475329 NPATQ14207 1427 aa19.61■□□□□ 0.73
TRAF4-210ENST00000475329 ARHGAP31Q2M1Z3 1444 aa19.59■□□□□ 0.73
TRAF4-210ENST00000475329 PREX1Q8TCU6 1659 aa19.59■□□□□ 0.73
TRAF4-210ENST00000475329 UHRF1BP1Q6BDS2 1440 aa19.58■□□□□ 0.72
TRAF4-210ENST00000475329 CNTLNQ9NXG0 1405 aa19.58■□□□□ 0.72
TRAF4-210ENST00000475329 MROH2AA6NES4 1674 aa19.57■□□□□ 0.72
TRAF4-210ENST00000475329 SPATA31E1Q6ZUB1 1445 aa19.57■□□□□ 0.72
TRAF4-210ENST00000475329 PIK3C2BO00750 1634 aa19.56■□□□□ 0.72
TRAF4-210ENST00000475329 PPP6R1Q9UPN7 881 aa19.56■□□□□ 0.72
TRAF4-210ENST00000475329 UGGT1Q9NYU2 1555 aa19.56■□□□□ 0.72
TRAF4-210ENST00000475329 SYNMO15061 1565 aa19.55■□□□□ 0.72
TRAF4-210ENST00000475329 IFT172Q9UG01 1749 aa19.55■□□□□ 0.72
TRAF4-210ENST00000475329 TRPM1Q7Z4N2 1603 aa19.54■□□□□ 0.72
TRAF4-210ENST00000475329 RALGAPBQ86X10 1494 aa19.54■□□□□ 0.72
TRAF4-210ENST00000475329 NOS1P29475 1434 aa19.53■□□□□ 0.72
TRAF4-210ENST00000475329 NBPF8Q3BBV2 869 aa19.53■□□□□ 0.72
TRAF4-210ENST00000475329 ADGRB3O60242 1522 aa19.51■□□□□ 0.71
TRAF4-210ENST00000475329 DCAF11Q8TEB1 546 aa19.5■□□□□ 0.71
TRAF4-210ENST00000475329 RGL3Q3MIN7 710 aa19.49■□□□□ 0.71
TRAF4-210ENST00000475329 MADDQ8WXG6 1647 aa19.49■□□□□ 0.71
TRAF4-210ENST00000475329 PRAG1Q86YV5 1406 aa19.49■□□□□ 0.71
TRAF4-210ENST00000475329 PPLO60437 1756 aa19.48■□□□□ 0.71
TRAF4-210ENST00000475329 ZNF326Q5BKZ1 582 aaKnown RBP19.48■□□□□ 0.71
TRAF4-210ENST00000475329 LAMC1P11047 1609 aa19.47■□□□□ 0.71
TRAF4-210ENST00000475329 POLR1AO95602 1720 aaPredicted RBP19.47■□□□□ 0.71
TRAF4-210ENST00000475329 ERVK-7P63135 1459 aa19.47■□□□□ 0.71
TRAF4-210ENST00000475329 KDM2AQ9Y2K7 1162 aa19.46■□□□□ 0.71
TRAF4-210ENST00000475329 MYO5BQ9ULV0 1848 aa19.46■□□□□ 0.71
TRAF4-210ENST00000475329 SPATA31D1Q6ZQQ2 1576 aa19.45■□□□□ 0.7
TRAF4-210ENST00000475329 FER1L4A9Z1Z3 1794 aa19.45■□□□□ 0.7
TRAF4-210ENST00000475329 ARID4BQ4LE39 1312 aaPredicted RBP19.45■□□□□ 0.7
TRAF4-210ENST00000475329 KIAA1210Q9ULL0 1709 aa19.45■□□□□ 0.7
TRAF4-210ENST00000475329 MYOM2P54296 1465 aa19.44■□□□□ 0.7
TRAF4-210ENST00000475329 MLECQ14165 292 aa19.44■□□□□ 0.7
TRAF4-210ENST00000475329 DIEXFQ68CQ4 756 aaKnown RBP19.44■□□□□ 0.7
TRAF4-210ENST00000475329 STAC3Q96MF2 364 aa19.43■□□□□ 0.7
TRAF4-210ENST00000475329 EIF4G2P78344 907 aaKnown RBP eCLIP19.42■□□□□ 0.7
TRAF4-210ENST00000475329 ESF1Q9H501 851 aaKnown RBP19.41■□□□□ 0.7
TRAF4-210ENST00000475329 TMEM131LA2VDJ0 1609 aa19.4■□□□□ 0.7
TRAF4-210ENST00000475329 HSPA5P11021 654 aaKnown RBP19.4■□□□□ 0.7
TRAF4-210ENST00000475329 ROCK2O75116 1388 aaKnown RBP19.38■□□□□ 0.69
TRAF4-210ENST00000475329 SLC52A1Q9NWF4 448 aa19.37■□□□□ 0.69
TRAF4-210ENST00000475329 GPRASP1Q5JY77 1395 aa19.36■□□□□ 0.69
TRAF4-210ENST00000475329 USP47Q96K76 1375 aa19.36■□□□□ 0.69
TRAF4-210ENST00000475329 HIRIP3Q9BW71 556 aaPredicted RBP19.36■□□□□ 0.69
TRAF4-210ENST00000475329 C3P01024 1663 aa19.36■□□□□ 0.69
TRAF4-210ENST00000475329 IQGAP1P46940 1657 aa19.36■□□□□ 0.69
TRAF4-210ENST00000475329 NEXMIFQ5QGS0 1516 aa19.35■□□□□ 0.69
TRAF4-210ENST00000475329 CHGAP10645 457 aaKnown RBP19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms