RNA–Protein interactions for RNA: ENST00000475255.5

SEMA4D-217, Transcript of semaphorin 4D, humanhuman

TSL 1 (best)

Gene SEMA4D, Length 3,053 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-217ENST00000475255 PLB1Q6P1J6 1458 aa18.13■□□□□ 0.49
SEMA4D-217ENST00000475255 KTN1Q86UP2 1357 aaKnown RBP18.12■□□□□ 0.49
SEMA4D-217ENST00000475255 DISP1Q96F81 1524 aa18.12■□□□□ 0.49
SEMA4D-217ENST00000475255 GPATCH8Q9UKJ3 1502 aaKnown RBP18.12■□□□□ 0.49
SEMA4D-217ENST00000475255 ZNF608Q9ULD9 1512 aaPredicted RBP18.12■□□□□ 0.49
SEMA4D-217ENST00000475255 RALGAPBQ86X10 1494 aa18.12■□□□□ 0.49
SEMA4D-217ENST00000475255 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.12■□□□□ 0.49
SEMA4D-217ENST00000475255 PBRM1Q86U86 1689 aa18.11■□□□□ 0.49
SEMA4D-217ENST00000475255 KIAA0586Q9BVV6 1533 aa18.11■□□□□ 0.49
SEMA4D-217ENST00000475255 ADAMTS12P58397 1594 aa18.1■□□□□ 0.49
SEMA4D-217ENST00000475255 TROQ12816 1431 aaPredicted RBP18.09■□□□□ 0.49
SEMA4D-217ENST00000475255 PANK3Q9H999 370 aa18.09■□□□□ 0.49
SEMA4D-217ENST00000475255 PER1O15534 1290 aaPredicted RBP18.08■□□□□ 0.48
SEMA4D-217ENST00000475255 TSPY4P0CV99 314 aa18.07■□□□□ 0.48
SEMA4D-217ENST00000475255 TSPY10P0CW01 314 aa18.07■□□□□ 0.48
SEMA4D-217ENST00000475255 MS4A1P11836 297 aa18.07■□□□□ 0.48
SEMA4D-217ENST00000475255 RGS3P49796 1198 aa18.07■□□□□ 0.48
SEMA4D-217ENST00000475255 UHRF1BP1Q6BDS2 1440 aa18.06■□□□□ 0.48
SEMA4D-217ENST00000475255 EIF5BO60841 1220 aaKnown RBP18.06■□□□□ 0.48
SEMA4D-217ENST00000475255 DAXXQ9UER7 740 aaPredicted RBP18.06■□□□□ 0.48
SEMA4D-217ENST00000475255 KIAA0556O60303 1618 aa18.06■□□□□ 0.48
SEMA4D-217ENST00000475255 RAPGEF6Q8TEU7 1601 aa18.06■□□□□ 0.48
SEMA4D-217ENST00000475255 PPM1GO15355 546 aaPredicted RBP18.05■□□□□ 0.48
SEMA4D-217ENST00000475255 PARD3Q8TEW0 1356 aa18.05■□□□□ 0.48
SEMA4D-217ENST00000475255 PDE3BQ13370 1112 aa18.05■□□□□ 0.48
SEMA4D-217ENST00000475255 NFKBIBQ15653 356 aa18.05■□□□□ 0.48
SEMA4D-217ENST00000475255 ADAMTS8Q9UP79 889 aa18.05■□□□□ 0.48
SEMA4D-217ENST00000475255 DISP3Q9P2K9 1392 aa18.04■□□□□ 0.48
SEMA4D-217ENST00000475255 C9orf84Q5VXU9 1444 aa18.02■□□□□ 0.48
SEMA4D-217ENST00000475255 PLEKHD1A6NEE1 506 aa18.02■□□□□ 0.47
SEMA4D-217ENST00000475255 FRAT1Q92837 279 aaPredicted RBP18.01■□□□□ 0.47
SEMA4D-217ENST00000475255 USP35Q9P2H5 1018 aa18.01■□□□□ 0.47
SEMA4D-217ENST00000475255 CHMP7Q8WUX9 453 aaPredicted RBP18■□□□□ 0.47
SEMA4D-217ENST00000475255 GSE1Q14687 1217 aa17.99■□□□□ 0.47
SEMA4D-217ENST00000475255 ADGRL2O95490 1459 aa17.99■□□□□ 0.47
SEMA4D-217ENST00000475255 CCDC146Q8IYE0 955 aa17.98■□□□□ 0.47
SEMA4D-217ENST00000475255 ADGBQ8N7X0 1667 aa17.98■□□□□ 0.47
SEMA4D-217ENST00000475255 DDRGK1Q96HY6 314 aa17.97■□□□□ 0.47
SEMA4D-217ENST00000475255 WASHC2CQ9Y4E1 1318 aa17.97■□□□□ 0.47
SEMA4D-217ENST00000475255 TESK2Q96S53 571 aa17.97■□□□□ 0.47
SEMA4D-217ENST00000475255 FRAT2O75474 233 aaPredicted RBP17.96■□□□□ 0.47
SEMA4D-217ENST00000475255 PLEKHH1Q9ULM0 1364 aa17.95■□□□□ 0.46
SEMA4D-217ENST00000475255 KDM2BQ8NHM5 1336 aa17.93■□□□□ 0.46
SEMA4D-217ENST00000475255 CCDC144AA2RUR9 1427 aa17.93■□□□□ 0.46
SEMA4D-217ENST00000475255 PRAG1Q86YV5 1406 aa17.93■□□□□ 0.46
SEMA4D-217ENST00000475255 C8orf34Q49A92 452 aa17.93■□□□□ 0.46
SEMA4D-217ENST00000475255 JPH4Q96JJ6 628 aa17.93■□□□□ 0.46
SEMA4D-217ENST00000475255 ARHGEF12Q9NZN5 1544 aa17.93■□□□□ 0.46
SEMA4D-217ENST00000475255 WDR43Q15061 677 aaKnown RBP eCLIP17.93■□□□□ 0.46
SEMA4D-217ENST00000475255 E9PCH4 1651 aa17.92■□□□□ 0.46
SEMA4D-217ENST00000475255 DUSP27Q5VZP5 1158 aa17.92■□□□□ 0.46
SEMA4D-217ENST00000475255 ARXQ96QS3 562 aa17.92■□□□□ 0.46
SEMA4D-217ENST00000475255 GRIN2AQ12879 1464 aa17.92■□□□□ 0.46
SEMA4D-217ENST00000475255 ITSN2Q9NZM3 1697 aa17.91■□□□□ 0.46
SEMA4D-217ENST00000475255 SPINK5Q9NQ38 1064 aaPredicted RBP17.91■□□□□ 0.46
SEMA4D-217ENST00000475255 CROCC2H7BZ55 1655 aa17.91■□□□□ 0.46
SEMA4D-217ENST00000475255 FAM161AQ3B820 660 aa17.9■□□□□ 0.46
SEMA4D-217ENST00000475255 TMF1P82094 1093 aa17.9■□□□□ 0.46
SEMA4D-217ENST00000475255 BCAR3O75815 825 aa17.9■□□□□ 0.46
SEMA4D-217ENST00000475255 BLMP54132 1417 aaPredicted RBP17.89■□□□□ 0.45
SEMA4D-217ENST00000475255 CENPQQ7L2Z9 268 aaPredicted RBP17.89■□□□□ 0.45
SEMA4D-217ENST00000475255 PPP2R1AP30153 589 aa17.89■□□□□ 0.45
SEMA4D-217ENST00000475255 CEP170Q5SW79 1584 aa17.89■□□□□ 0.45
SEMA4D-217ENST00000475255 KDM5DQ9BY66 1539 aa17.88■□□□□ 0.45
SEMA4D-217ENST00000475255 ERBINQ96RT1 1412 aa17.88■□□□□ 0.45
SEMA4D-217ENST00000475255 KNSTRNQ9Y448 316 aa17.87■□□□□ 0.45
SEMA4D-217ENST00000475255 GOLGA2Q08379 1002 aa17.87■□□□□ 0.45
SEMA4D-217ENST00000475255 CDC42BPAQ5VT25 1732 aa17.86■□□□□ 0.45
SEMA4D-217ENST00000475255 MRC2Q9UBG0 1479 aa17.86■□□□□ 0.45
SEMA4D-217ENST00000475255 A2MP01023 1474 aa17.86■□□□□ 0.45
SEMA4D-217ENST00000475255 COL17A1Q9UMD9 1497 aaPredicted RBP17.86■□□□□ 0.45
SEMA4D-217ENST00000475255 FAM135AQ9P2D6 1515 aa17.85■□□□□ 0.45
SEMA4D-217ENST00000475255 APAF1O14727 1248 aa17.85■□□□□ 0.45
SEMA4D-217ENST00000475255 DMRT2Q9Y5R5 561 aa17.85■□□□□ 0.45
SEMA4D-217ENST00000475255 PLA2R1Q13018 1463 aa17.84■□□□□ 0.45
SEMA4D-217ENST00000475255 ZMYM4Q5VZL5 1548 aa17.83■□□□□ 0.45
SEMA4D-217ENST00000475255 ATP10BO94823 1461 aa17.83■□□□□ 0.45
SEMA4D-217ENST00000475255 MAGI1Q96QZ7 1491 aaPredicted RBP17.83■□□□□ 0.45
SEMA4D-217ENST00000475255 SEC24BO95487 1268 aa17.83■□□□□ 0.44
SEMA4D-217ENST00000475255 IGHDP01880 384 aa17.83■□□□□ 0.44
SEMA4D-217ENST00000475255 TRPM1Q7Z4N2 1603 aa17.83■□□□□ 0.44
SEMA4D-217ENST00000475255 SLKQ9H2G2 1235 aaPredicted RBP17.83■□□□□ 0.44
SEMA4D-217ENST00000475255 PTPRGP23470 1445 aa17.81■□□□□ 0.44
SEMA4D-217ENST00000475255 ABCC10Q5T3U5 1492 aa17.81■□□□□ 0.44
SEMA4D-217ENST00000475255 MAGI2Q86UL8 1455 aa17.81■□□□□ 0.44
SEMA4D-217ENST00000475255 IFT140Q96RY7 1462 aa17.8■□□□□ 0.44
SEMA4D-217ENST00000475255 SLFN5Q08AF3 891 aa17.8■□□□□ 0.44
SEMA4D-217ENST00000475255 CARMIL2Q6F5E8 1435 aa17.79■□□□□ 0.44
SEMA4D-217ENST00000475255 NEUROD2Q15784 382 aa17.79■□□□□ 0.44
SEMA4D-217ENST00000475255 AMER1Q5JTC6 1135 aaPredicted RBP17.79■□□□□ 0.44
SEMA4D-217ENST00000475255 PANK1Q8TE04 598 aa17.79■□□□□ 0.44
SEMA4D-217ENST00000475255 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.78■□□□□ 0.44
SEMA4D-217ENST00000475255 POGKQ9P215 609 aa17.78■□□□□ 0.44
SEMA4D-217ENST00000475255 COG6Q9Y2V7 657 aa17.78■□□□□ 0.44
SEMA4D-217ENST00000475255 GPRASP1Q5JY77 1395 aa17.77■□□□□ 0.44
SEMA4D-217ENST00000475255 SHANK2Q9UPX8 1470 aa17.77■□□□□ 0.44
SEMA4D-217ENST00000475255 ZNF521Q96K83 1311 aa17.77■□□□□ 0.43
SEMA4D-217ENST00000475255 SPRYD3Q8NCJ5 442 aa17.76■□□□□ 0.43
SEMA4D-217ENST00000475255 ADCY10Q96PN6 1610 aa17.76■□□□□ 0.43
SEMA4D-217ENST00000475255 EIF4G3O43432 1585 aaKnown RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms