RNA–Protein interactions for RNA: ENST00000475049.5

SDHB-204, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 3

Gene SDHB, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-204ENST00000475049 PPP4R3BQ5MIZ7 849 aa8.96□□□□□ -0.98
SDHB-204ENST00000475049 NUTM2FA1L443 756 aa8.95□□□□□ -0.98
SDHB-204ENST00000475049 RNF166Q96A37 237 aaPredicted RBP8.95□□□□□ -0.98
SDHB-204ENST00000475049 ZMYND10O75800 440 aa8.93□□□□□ -0.98
SDHB-204ENST00000475049 PSEN2P49810 448 aa8.93□□□□□ -0.98
SDHB-204ENST00000475049 OSBPP22059 807 aa8.92□□□□□ -0.98
SDHB-204ENST00000475049 FOSBP53539 338 aa8.92□□□□□ -0.98
SDHB-204ENST00000475049 DMRTA1Q5VZB9 504 aa8.92□□□□□ -0.98
SDHB-204ENST00000475049 KRI1Q8N9T8 703 aaKnown RBP8.92□□□□□ -0.98
SDHB-204ENST00000475049 SLC24A3Q9HC58 644 aa8.92□□□□□ -0.98
SDHB-204ENST00000475049 ADGRD1Q6QNK2 874 aa8.91□□□□□ -0.98
SDHB-204ENST00000475049 ZNF454Q8N9F8 522 aa8.91□□□□□ -0.98
SDHB-204ENST00000475049 TK2O00142 265 aa8.9□□□□□ -0.98
SDHB-204ENST00000475049 BARGINQ6ZT62 677 aa8.89□□□□□ -0.99
SDHB-204ENST00000475049 BCL2L12Q9HB09 334 aa8.89□□□□□ -0.99
SDHB-204ENST00000475049 JPH4Q96JJ6 628 aa8.88□□□□□ -0.99
SDHB-204ENST00000475049 KCNK17Q96T54 332 aa8.88□□□□□ -0.99
SDHB-204ENST00000475049 HRO43593 1189 aa8.87□□□□□ -0.99
SDHB-204ENST00000475049 PHF14O94880 888 aa8.87□□□□□ -0.99
SDHB-204ENST00000475049 RBM33Q96EV2 1170 aaKnown RBP8.87□□□□□ -0.99
SDHB-204ENST00000475049 EPAS1Q99814 870 aa8.87□□□□□ -0.99
SDHB-204ENST00000475049 MAP3K7O43318 606 aa8.86□□□□□ -0.99
SDHB-204ENST00000475049 FCHSD2O94868 740 aa8.85□□□□□ -0.99
SDHB-204ENST00000475049 PRIM1P49642 420 aaKnown RBP8.84□□□□□ -0.99
SDHB-204ENST00000475049 TYW1BQ6NUM6 668 aa8.84□□□□□ -0.99
SDHB-204ENST00000475049 ZDHHC16Q969W1 377 aa8.84□□□□□ -0.99
SDHB-204ENST00000475049 KCNH8Q96L42 1107 aa8.84□□□□□ -0.99
SDHB-204ENST00000475049 AK7Q96M32 723 aa8.84□□□□□ -0.99
SDHB-204ENST00000475049 ADAM33Q9BZ11 813 aa8.84□□□□□ -0.99
SDHB-204ENST00000475049 PCDHGA10Q9Y5H3 936 aa8.84□□□□□ -0.99
SDHB-204ENST00000475049 EN1Q05925 392 aaPredicted RBP8.83□□□□□ -1
SDHB-204ENST00000475049 NEUROD2Q15784 382 aa8.83□□□□□ -1
SDHB-204ENST00000475049 SLC4A5Q9BY07 1137 aa8.83□□□□□ -1
SDHB-204ENST00000475049 VPS9D1Q9Y2B5 631 aa8.83□□□□□ -1
SDHB-204ENST00000475049 GPR37O15354 613 aa8.82□□□□□ -1
SDHB-204ENST00000475049 PTPREP23469 700 aa8.82□□□□□ -1
SDHB-204ENST00000475049 FBXW7Q969H0 707 aa8.82□□□□□ -1
SDHB-204ENST00000475049 GNPATO15228 680 aa8.81□□□□□ -1
SDHB-204ENST00000475049 HIC1Q14526 733 aa8.81□□□□□ -1
SDHB-204ENST00000475049 BRPF1P55201 1214 aaPredicted RBP8.79□□□□□ -1
SDHB-204ENST00000475049 PTGDRQ13258 359 aa8.79□□□□□ -1
SDHB-204ENST00000475049 TSR1Q2NL82 804 aaKnown RBP8.79□□□□□ -1
SDHB-204ENST00000475049 CDHR5Q9HBB8 845 aa8.79□□□□□ -1
SDHB-204ENST00000475049 MINK1Q8N4C8 1332 aaPredicted RBP8.79□□□□□ -1
SDHB-204ENST00000475049 MAP2K5Q13163 448 aa8.78□□□□□ -1
SDHB-204ENST00000475049 ZBED2Q9BTP6 218 aa8.78□□□□□ -1
SDHB-204ENST00000475049 FECHP22830 423 aa8.77□□□□□ -1.01
SDHB-204ENST00000475049 BHMG1C9JSJ3 638 aaPredicted RBP8.76□□□□□ -1.01
SDHB-204ENST00000475049 CCDC102AQ96A19 550 aa8.76□□□□□ -1.01
SDHB-204ENST00000475049 IRF6O14896 467 aa8.75□□□□□ -1.01
SDHB-204ENST00000475049 TRIM66O15016 1216 aa8.75□□□□□ -1.01
SDHB-204ENST00000475049 C6orf132Q5T0Z8 1188 aa8.75□□□□□ -1.01
SDHB-204ENST00000475049 STAC3Q96MF2 364 aa8.75□□□□□ -1.01
SDHB-204ENST00000475049 HCSTQ9UBK5 93 aa8.75□□□□□ -1.01
SDHB-204ENST00000475049 COL9A1P20849 921 aa8.74□□□□□ -1.01
SDHB-204ENST00000475049 PPP1R3GB7ZBB8 358 aa8.73□□□□□ -1.01
SDHB-204ENST00000475049 PDE4DQ08499 809 aa8.73□□□□□ -1.01
SDHB-204ENST00000475049 NPDC1Q9NQX5 325 aaPredicted RBP8.73□□□□□ -1.01
SDHB-204ENST00000475049 CERKQ8TCT0 537 aa8.72□□□□□ -1.01
SDHB-204ENST00000475049 KCTD12Q96CX2 325 aaKnown RBP8.72□□□□□ -1.01
SDHB-204ENST00000475049 TMEM132AQ24JP5 1023 aa8.71□□□□□ -1.02
SDHB-204ENST00000475049 GPBP1L1Q9HC44 474 aaPredicted RBP8.71□□□□□ -1.02
SDHB-204ENST00000475049 TTLL12Q14166 644 aaPredicted RBP8.68□□□□□ -1.02
SDHB-204ENST00000475049 PROX2Q3B8N5 592 aa8.68□□□□□ -1.02
SDHB-204ENST00000475049 PADI6Q6TGC4 694 aa8.68□□□□□ -1.02
SDHB-204ENST00000475049 MRPL50Q8N5N7 158 aaKnown RBP8.68□□□□□ -1.02
SDHB-204ENST00000475049 KDM4CQ9H3R0 1056 aa8.68□□□□□ -1.02
SDHB-204ENST00000475049 RABGEF1Q9UJ41 708 aa8.68□□□□□ -1.02
SDHB-204ENST00000475049 PRSS12P56730 875 aa8.66□□□□□ -1.02
SDHB-204ENST00000475049 FAM161AQ3B820 660 aa8.66□□□□□ -1.02
SDHB-204ENST00000475049 NBPF3Q9H094 633 aa8.66□□□□□ -1.02
SDHB-204ENST00000475049 ONECUT3O60422 494 aaPredicted RBP8.65□□□□□ -1.02
SDHB-204ENST00000475049 AMHR2Q16671 573 aa8.65□□□□□ -1.02
SDHB-204ENST00000475049 CDCA7LQ96GN5 454 aa8.65□□□□□ -1.02
SDHB-204ENST00000475049 GOLGA8CPA6NN73 597 aa8.64□□□□□ -1.03
SDHB-204ENST00000475049 THSD4Q6ZMP0 1018 aa8.64□□□□□ -1.03
SDHB-204ENST00000475049 IL27Q8NEV9 243 aa8.64□□□□□ -1.03
SDHB-204ENST00000475049 WNT2BQ93097 391 aa8.64□□□□□ -1.03
SDHB-204ENST00000475049 PLA2G2EQ9NZK7 142 aa8.64□□□□□ -1.03
SDHB-204ENST00000475049 KIAA1468Q9P260 1216 aa8.64□□□□□ -1.03
SDHB-204ENST00000475049 OATP04181 439 aa8.63□□□□□ -1.03
SDHB-204ENST00000475049 PARP9Q8IXQ6 854 aa8.63□□□□□ -1.03
SDHB-204ENST00000475049 RBM27Q9P2N5 1060 aaKnown RBP8.63□□□□□ -1.03
SDHB-204ENST00000475049 TRIM6-TRIM34B2RNG4 842 aa8.62□□□□□ -1.03
SDHB-204ENST00000475049 PTPN5P54829 565 aa8.62□□□□□ -1.03
SDHB-204ENST00000475049 LAPTM4BQ86VI4 370 aa8.62□□□□□ -1.03
SDHB-204ENST00000475049 DAXXQ9UER7 740 aaPredicted RBP8.62□□□□□ -1.03
SDHB-204ENST00000475049 MDM2Q00987 491 aaPredicted RBP8.61□□□□□ -1.03
SDHB-204ENST00000475049 ADGRG1Q9Y653 693 aa8.61□□□□□ -1.03
SDHB-204ENST00000475049 METTL3Q86U44 580 aaKnown RBP8.6□□□□□ -1.03
SDHB-204ENST00000475049 RBM46Q8TBY0 533 aaKnown RBP8.6□□□□□ -1.03
SDHB-204ENST00000475049 CLCN1P35523 988 aa8.59□□□□□ -1.03
SDHB-204ENST00000475049 GIGYF2Q6Y7W6 1299 aaKnown RBP8.59□□□□□ -1.03
SDHB-204ENST00000475049 NLRP7Q8WX94 980 aa8.59□□□□□ -1.03
SDHB-204ENST00000475049 PHOX2BQ99453 314 aa8.59□□□□□ -1.03
SDHB-204ENST00000475049 GTF3C3Q9Y5Q9 886 aa8.59□□□□□ -1.03
SDHB-204ENST00000475049 PACS2Q86VP3 889 aa8.58□□□□□ -1.04
SDHB-204ENST00000475049 TTC13Q8NBP0 860 aa8.58□□□□□ -1.04
SDHB-204ENST00000475049 PXYLP1Q8TE99 480 aa8.58□□□□□ -1.04
SDHB-204ENST00000475049 FAM117AQ9C073 453 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms