RNA–Protein interactions for RNA: ENST00000474945.1

SPCS1-204, Transcript of signal peptidase complex subunit 1, humanhuman

TSL 2

Gene SPCS1, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1-204ENST00000474945 ABCC5O15440 1437 aa21.18■□□□□ 0.98
SPCS1-204ENST00000474945 DAPK1P53355 1430 aa21.18■□□□□ 0.98
SPCS1-204ENST00000474945 MYO3AQ8NEV4 1616 aa21.18■□□□□ 0.98
SPCS1-204ENST00000474945 EIF2AK4Q9P2K8 1649 aaKnown RBP21.18■□□□□ 0.98
SPCS1-204ENST00000474945 RNF17Q9BXT8 1623 aaKnown RBP21.17■□□□□ 0.98
SPCS1-204ENST00000474945 SETD1BQ9UPS6 1966 aaKnown RBP21.17■□□□□ 0.98
SPCS1-204ENST00000474945 PTPRKQ15262 1439 aa21.16■□□□□ 0.98
SPCS1-204ENST00000474945 DUOX2Q9NRD8 1548 aa21.15■□□□□ 0.98
SPCS1-204ENST00000474945 KIF15Q9NS87 1388 aa21.14■□□□□ 0.98
SPCS1-204ENST00000474945 ZNF142P52746 1687 aaPredicted RBP21.12■□□□□ 0.97
SPCS1-204ENST00000474945 WASHC2CQ9Y4E1 1318 aa21.11■□□□□ 0.97
SPCS1-204ENST00000474945 PZPP20742 1482 aa21.11■□□□□ 0.97
SPCS1-204ENST00000474945 ZC3H13Q5T200 1668 aaKnown RBP21.11■□□□□ 0.97
SPCS1-204ENST00000474945 CEP170BQ9Y4F5 1589 aaPredicted RBP21.1■□□□□ 0.97
SPCS1-204ENST00000474945 ERBINQ96RT1 1412 aa21.1■□□□□ 0.97
SPCS1-204ENST00000474945 ABCC3O15438 1527 aa21.09■□□□□ 0.97
SPCS1-204ENST00000474945 MROH1Q8NDA8 1641 aa21.09■□□□□ 0.97
SPCS1-204ENST00000474945 FAM50AQ14320 339 aaKnown RBP21.09■□□□□ 0.97
SPCS1-204ENST00000474945 STRCQ7RTU9 1775 aa21.08■□□□□ 0.97
SPCS1-204ENST00000474945 CAMSAP1Q5T5Y3 1602 aa21.07■□□□□ 0.96
SPCS1-204ENST00000474945 RRP7BPQ9NSQ0 103 aa21.07■□□□□ 0.96
SPCS1-204ENST00000474945 ANKRD30AQ9BXX3 1397 aa21.07■□□□□ 0.96
SPCS1-204ENST00000474945 NCOA1Q15788 1441 aa21.06■□□□□ 0.96
SPCS1-204ENST00000474945 TNRQ92752 1358 aa21.06■□□□□ 0.96
SPCS1-204ENST00000474945 PRDM15P57071 1507 aaPredicted RBP21.05■□□□□ 0.96
SPCS1-204ENST00000474945 ILDR1Q86SU0 546 aaPredicted RBP21.05■□□□□ 0.96
SPCS1-204ENST00000474945 CHIC2Q9UKJ5 165 aa21.05■□□□□ 0.96
SPCS1-204ENST00000474945 CEP152O94986 1710 aa21.04■□□□□ 0.96
SPCS1-204ENST00000474945 A2ML1A8K2U0 1454 aa21.02■□□□□ 0.96
SPCS1-204ENST00000474945 FBXO31Q5XUX0 539 aaPredicted RBP21.02■□□□□ 0.96
SPCS1-204ENST00000474945 DMRT2Q9Y5R5 561 aa21.02■□□□□ 0.96
SPCS1-204ENST00000474945 ADGRL2O95490 1459 aa21.01■□□□□ 0.95
SPCS1-204ENST00000474945 DEPDC5O75140 1603 aa21■□□□□ 0.95
SPCS1-204ENST00000474945 PPARGC1BQ86YN6 1023 aaKnown RBP21■□□□□ 0.95
SPCS1-204ENST00000474945 PLA2R1Q13018 1463 aa21■□□□□ 0.95
SPCS1-204ENST00000474945 PTPRTO14522 1441 aa20.98■□□□□ 0.95
SPCS1-204ENST00000474945 ERVK-7P63135 1459 aa20.97■□□□□ 0.95
SPCS1-204ENST00000474945 SPATA31D1Q6ZQQ2 1576 aa20.97■□□□□ 0.95
SPCS1-204ENST00000474945 NLRP1Q9C000 1473 aa20.96■□□□□ 0.95
SPCS1-204ENST00000474945 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.96■□□□□ 0.95
SPCS1-204ENST00000474945 KANK1Q14678 1352 aa20.96■□□□□ 0.95
SPCS1-204ENST00000474945 NCKAP5LQ9HCH0 1330 aa20.93■□□□□ 0.94
SPCS1-204ENST00000474945 FBXO41Q8TF61 875 aa20.92■□□□□ 0.94
SPCS1-204ENST00000474945 UGGT1Q9NYU2 1555 aa20.91■□□□□ 0.94
SPCS1-204ENST00000474945 ANKRD50Q9ULJ7 1429 aa20.91■□□□□ 0.94
SPCS1-204ENST00000474945 PKD2Q13563 968 aa20.9■□□□□ 0.94
SPCS1-204ENST00000474945 POLR1AO95602 1720 aaPredicted RBP20.9■□□□□ 0.94
SPCS1-204ENST00000474945 VWDEQ8N2E2 1590 aa20.89■□□□□ 0.94
SPCS1-204ENST00000474945 ARHGAP31Q2M1Z3 1444 aa20.89■□□□□ 0.94
SPCS1-204ENST00000474945 CERKQ8TCT0 537 aa20.89■□□□□ 0.93
SPCS1-204ENST00000474945 LMTK2Q8IWU2 1503 aa20.88■□□□□ 0.93
SPCS1-204ENST00000474945 ITGAEP38570 1179 aa20.88■□□□□ 0.93
SPCS1-204ENST00000474945 EFCAB6Q5THR3 1501 aa20.87■□□□□ 0.93
SPCS1-204ENST00000474945 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.86■□□□□ 0.936e-7■■■■□ 24.4
SPCS1-204ENST00000474945 ROCK1Q13464 1354 aa20.85■□□□□ 0.93
SPCS1-204ENST00000474945 NEURL4Q96JN8 1562 aa20.85■□□□□ 0.93
SPCS1-204ENST00000474945 UNC13BO14795 1591 aa20.84■□□□□ 0.93
SPCS1-204ENST00000474945 LTBP4Q8N2S1 1624 aa20.83■□□□□ 0.93
SPCS1-204ENST00000474945 CFAP65Q6ZU64 1925 aaKnown RBP20.82■□□□□ 0.92
SPCS1-204ENST00000474945 THEMISQ8N1K5 641 aaPredicted RBP20.82■□□□□ 0.92
SPCS1-204ENST00000474945 UBR1Q8IWV7 1749 aa20.81■□□□□ 0.92
SPCS1-204ENST00000474945 RRBP1Q9P2E9 1410 aaKnown RBP20.8■□□□□ 0.92
SPCS1-204ENST00000474945 ZNF335Q9H4Z2 1342 aaPredicted RBP20.79■□□□□ 0.92
SPCS1-204ENST00000474945 TET3O43151 1660 aa20.79■□□□□ 0.92
SPCS1-204ENST00000474945 SYNMO15061 1565 aa20.78■□□□□ 0.92
SPCS1-204ENST00000474945 ANKLE2Q86XL3 938 aa20.78■□□□□ 0.92
SPCS1-204ENST00000474945 PIK3C2BO00750 1634 aa20.78■□□□□ 0.92
SPCS1-204ENST00000474945 NPHP4O75161 1426 aaPredicted RBP20.77■□□□□ 0.91
SPCS1-204ENST00000474945 IQGAP1P46940 1657 aa20.76■□□□□ 0.91
SPCS1-204ENST00000474945 RPRD2Q5VT52 1461 aaKnown RBP20.75■□□□□ 0.91
SPCS1-204ENST00000474945 GCC2Q8IWJ2 1684 aa20.75■□□□□ 0.91
SPCS1-204ENST00000474945 NOS1P29475 1434 aa20.74■□□□□ 0.91
SPCS1-204ENST00000474945 IQGAP3Q86VI3 1631 aa20.74■□□□□ 0.91
SPCS1-204ENST00000474945 MED14O60244 1454 aa20.74■□□□□ 0.91
SPCS1-204ENST00000474945 IQSEC2Q5JU85 1478 aa20.73■□□□□ 0.91
SPCS1-204ENST00000474945 SCAF11Q99590 1463 aaKnown RBP20.73■□□□□ 0.91
SPCS1-204ENST00000474945 STAG3Q9UJ98 1225 aa20.72■□□□□ 0.91
SPCS1-204ENST00000474945 ADGRB3O60242 1522 aa20.72■□□□□ 0.91
SPCS1-204ENST00000474945 SLIT1O75093 1534 aa20.71■□□□□ 0.91
SPCS1-204ENST00000474945 ARHGAP23Q9P227 1491 aa20.7■□□□□ 0.9
SPCS1-204ENST00000474945 KDM5AP29375 1690 aaKnown RBP20.69■□□□□ 0.9
SPCS1-204ENST00000474945 NUP155O75694 1391 aa20.69■□□□□ 0.9
SPCS1-204ENST00000474945 CPS1P31327 1500 aa20.68■□□□□ 0.9
SPCS1-204ENST00000474945 E9PCH4 1651 aa20.67■□□□□ 0.9
SPCS1-204ENST00000474945 TMEM2Q9UHN6 1383 aa20.67■□□□□ 0.9
SPCS1-204ENST00000474945 IDI1Q13907 227 aa20.66■□□□□ 0.9
SPCS1-204ENST00000474945 EID1Q9Y6B2 187 aa20.65■□□□□ 0.9
SPCS1-204ENST00000474945 TXNDC2Q86VQ3 553 aa20.64■□□□□ 0.89
SPCS1-204ENST00000474945 NAIPQ13075 1403 aa20.63■□□□□ 0.89
SPCS1-204ENST00000474945 SLC52A1Q9NWF4 448 aa20.63■□□□□ 0.89
SPCS1-204ENST00000474945 LTKP29376 864 aa20.62■□□□□ 0.89
SPCS1-204ENST00000474945 HFM1A2PYH4 1435 aa20.6■□□□□ 0.89
SPCS1-204ENST00000474945 ADRA2BP18089 450 aa20.59■□□□□ 0.89
SPCS1-204ENST00000474945 TMEM131LA2VDJ0 1609 aa20.57■□□□□ 0.88
SPCS1-204ENST00000474945 UBAP1LF5GYI3 381 aa20.57■□□□□ 0.88
SPCS1-204ENST00000474945 MYO5BQ9ULV0 1848 aa20.56■□□□□ 0.88
SPCS1-204ENST00000474945 STRCP1A6NGW2 1772 aa20.56■□□□□ 0.88
SPCS1-204ENST00000474945 SPHKAPQ2M3C7 1700 aa20.56■□□□□ 0.88
SPCS1-204ENST00000474945 CHGAP10645 457 aaKnown RBP20.55■□□□□ 0.88
SPCS1-204ENST00000474945 ZFYVE9O95405 1425 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms