RNA–Protein interactions for RNA: ENST00000474896.1

SRRT-209, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-209ENST00000474896 WASHC2CQ9Y4E1 1318 aa24.88■■□□□ 1.57
SRRT-209ENST00000474896 UBAP1LF5GYI3 381 aa24.88■■□□□ 1.57
SRRT-209ENST00000474896 A2ML1A8K2U0 1454 aa24.88■■□□□ 1.57
SRRT-209ENST00000474896 TSPY4P0CV99 314 aa24.87■■□□□ 1.57
SRRT-209ENST00000474896 TSPY10P0CW01 314 aa24.87■■□□□ 1.57
SRRT-209ENST00000474896 TNRQ92752 1358 aa24.85■■□□□ 1.57
SRRT-209ENST00000474896 DNMT1P26358 1616 aaKnown RBP24.84■■□□□ 1.57
SRRT-209ENST00000474896 LOC105371045A0A1W2PR82 267 aa24.83■■□□□ 1.57
SRRT-209ENST00000474896 KDM5DQ9BY66 1539 aa24.8■■□□□ 1.56
SRRT-209ENST00000474896 PZPP20742 1482 aa24.79■■□□□ 1.56
SRRT-209ENST00000474896 ARHGEF5Q12774 1597 aa24.77■■□□□ 1.56
SRRT-209ENST00000474896 SOCS7O14512 581 aa24.77■■□□□ 1.56
SRRT-209ENST00000474896 ANKLE2Q86XL3 938 aa24.77■■□□□ 1.56
SRRT-209ENST00000474896 THEMISQ8N1K5 641 aaPredicted RBP24.77■■□□□ 1.56
SRRT-209ENST00000474896 MIA2Q96PC5 1412 aa24.77■■□□□ 1.56
SRRT-209ENST00000474896 LRRC9Q6ZRR7 1453 aa24.76■■□□□ 1.55
SRRT-209ENST00000474896 FAM135AQ9P2D6 1515 aa24.76■■□□□ 1.55
SRRT-209ENST00000474896 KANK4Q5T7N3 995 aaPredicted RBP24.75■■□□□ 1.55
SRRT-209ENST00000474896 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.75■■□□□ 1.55
SRRT-209ENST00000474896 VPS8Q8N3P4 1428 aa24.75■■□□□ 1.55
SRRT-209ENST00000474896 SPATA31D1Q6ZQQ2 1576 aa24.75■■□□□ 1.55
SRRT-209ENST00000474896 POLR1AO95602 1720 aaPredicted RBP24.7■■□□□ 1.54
SRRT-209ENST00000474896 NEURL4Q96JN8 1562 aa24.7■■□□□ 1.54
SRRT-209ENST00000474896 NLRP1Q9C000 1473 aa24.69■■□□□ 1.54
SRRT-209ENST00000474896 SCAF1Q9H7N4 1312 aaKnown RBP24.68■■□□□ 1.54
SRRT-209ENST00000474896 SHANK2Q9UPX8 1470 aa24.68■■□□□ 1.54
SRRT-209ENST00000474896 UGGT1Q9NYU2 1555 aa24.67■■□□□ 1.54
SRRT-209ENST00000474896 TOM1O60784 492 aa24.67■■□□□ 1.54
SRRT-209ENST00000474896 PIP4K2BP78356 416 aa24.67■■□□□ 1.54
SRRT-209ENST00000474896 CPS1P31327 1500 aa24.65■■□□□ 1.54
SRRT-209ENST00000474896 MAST1Q9Y2H9 1570 aa24.64■■□□□ 1.54
SRRT-209ENST00000474896 NPHP4O75161 1426 aaPredicted RBP24.63■■□□□ 1.53
SRRT-209ENST00000474896 ABCC3O15438 1527 aa24.63■■□□□ 1.53
SRRT-209ENST00000474896 RNF17Q9BXT8 1623 aaKnown RBP24.63■■□□□ 1.53
SRRT-209ENST00000474896 MYOM3Q5VTT5 1437 aa24.62■■□□□ 1.53
SRRT-209ENST00000474896 MAP3K1Q13233 1512 aa24.62■■□□□ 1.53
SRRT-209ENST00000474896 HSPA1LP34931 641 aa24.62■■□□□ 1.53
SRRT-209ENST00000474896 MED14O60244 1454 aa24.61■■□□□ 1.53
SRRT-209ENST00000474896 CFAP65Q6ZU64 1925 aaKnown RBP24.59■■□□□ 1.53
SRRT-209ENST00000474896 VWDEQ8N2E2 1590 aa24.59■■□□□ 1.53
SRRT-209ENST00000474896 DEPDC5O75140 1603 aa24.58■■□□□ 1.53
SRRT-209ENST00000474896 EIF2AK4Q9P2K8 1649 aaKnown RBP24.57■■□□□ 1.52
SRRT-209ENST00000474896 ZC3H13Q5T200 1668 aaKnown RBP24.57■■□□□ 1.52
SRRT-209ENST00000474896 ERVK-7P63135 1459 aa24.57■■□□□ 1.52
SRRT-209ENST00000474896 RRP7BPQ9NSQ0 103 aa24.56■■□□□ 1.52
SRRT-209ENST00000474896 DUOX2Q9NRD8 1548 aa24.55■■□□□ 1.52
SRRT-209ENST00000474896 MROH1Q8NDA8 1641 aa24.54■■□□□ 1.52
SRRT-209ENST00000474896 APLP2Q06481 763 aa24.54■■□□□ 1.52
SRRT-209ENST00000474896 IQGAP1P46940 1657 aa24.53■■□□□ 1.52
SRRT-209ENST00000474896 CEP152O94986 1710 aa24.52■■□□□ 1.52
SRRT-209ENST00000474896 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.52■■□□□ 1.526e-9■■■■■ 27.9
SRRT-209ENST00000474896 KIF15Q9NS87 1388 aa24.52■■□□□ 1.52
SRRT-209ENST00000474896 ABCC5O15440 1437 aa24.51■■□□□ 1.51
SRRT-209ENST00000474896 TXNDC2Q86VQ3 553 aa24.49■■□□□ 1.51
SRRT-209ENST00000474896 LTKP29376 864 aa24.48■■□□□ 1.51
SRRT-209ENST00000474896 STRCP1A6NGW2 1772 aa24.46■■□□□ 1.51
SRRT-209ENST00000474896 UBR1Q8IWV7 1749 aa24.46■■□□□ 1.51
SRRT-209ENST00000474896 ARHGAP31Q2M1Z3 1444 aa24.45■■□□□ 1.51
SRRT-209ENST00000474896 PTPN23Q9H3S7 1636 aa24.45■■□□□ 1.5
SRRT-209ENST00000474896 LRRC7Q96NW7 1537 aa24.45■■□□□ 1.5
SRRT-209ENST00000474896 ERBINQ96RT1 1412 aa24.44■■□□□ 1.5
SRRT-209ENST00000474896 SENP3Q9H4L4 574 aaPredicted RBP24.44■■□□□ 1.5
SRRT-209ENST00000474896 CHIC2Q9UKJ5 165 aa24.44■■□□□ 1.5
SRRT-209ENST00000474896 ALKQ9UM73 1620 aa24.43■■□□□ 1.5
SRRT-209ENST00000474896 EID1Q9Y6B2 187 aa24.43■■□□□ 1.5
SRRT-209ENST00000474896 SCAF11Q99590 1463 aaKnown RBP24.43■■□□□ 1.5
SRRT-209ENST00000474896 DAPK1P53355 1430 aa24.43■■□□□ 1.5
SRRT-209ENST00000474896 PRDM15P57071 1507 aaPredicted RBP24.41■■□□□ 1.5
SRRT-209ENST00000474896 STAG3Q9UJ98 1225 aa24.41■■□□□ 1.5
SRRT-209ENST00000474896 MED1Q15648 1581 aaPredicted RBP24.41■■□□□ 1.5
SRRT-209ENST00000474896 KANK1Q14678 1352 aa24.41■■□□□ 1.5
SRRT-209ENST00000474896 CROCC2H7BZ55 1655 aa24.4■■□□□ 1.5
SRRT-209ENST00000474896 ARHGAP23Q9P227 1491 aa24.39■■□□□ 1.5
SRRT-209ENST00000474896 SLIT1O75093 1534 aa24.39■■□□□ 1.49
SRRT-209ENST00000474896 FGD6Q6ZV73 1430 aa24.38■■□□□ 1.49
SRRT-209ENST00000474896 IDI1Q13907 227 aa24.37■■□□□ 1.49
SRRT-209ENST00000474896 ANKRD30AQ9BXX3 1397 aa24.37■■□□□ 1.49
SRRT-209ENST00000474896 SYNMO15061 1565 aa24.34■■□□□ 1.49
SRRT-209ENST00000474896 TMEM2Q9UHN6 1383 aa24.34■■□□□ 1.49
SRRT-209ENST00000474896 PHF23Q9BUL5 403 aaPredicted RBP24.34■■□□□ 1.49
SRRT-209ENST00000474896 PIK3C2BO00750 1634 aa24.33■■□□□ 1.49
SRRT-209ENST00000474896 LMTK2Q8IWU2 1503 aa24.29■■□□□ 1.48
SRRT-209ENST00000474896 FAM50AQ14320 339 aaKnown RBP24.28■■□□□ 1.48
SRRT-209ENST00000474896 SLC26A8Q96RN1 970 aa24.27■■□□□ 1.48
SRRT-209ENST00000474896 EFCAB6Q5THR3 1501 aa24.26■■□□□ 1.47
SRRT-209ENST00000474896 KCNA6P17658 529 aa24.26■■□□□ 1.47
SRRT-209ENST00000474896 XIRP1Q702N8 1843 aaKnown RBP24.25■■□□□ 1.47
SRRT-209ENST00000474896 SLC52A1Q9NWF4 448 aa24.24■■□□□ 1.47
SRRT-209ENST00000474896 PROSER2Q86WR7 435 aaPredicted RBP24.23■■□□□ 1.47
SRRT-209ENST00000474896 NOS1P29475 1434 aa24.23■■□□□ 1.47
SRRT-209ENST00000474896 KDM5AP29375 1690 aaKnown RBP24.22■■□□□ 1.47
SRRT-209ENST00000474896 BCANQ96GW7 911 aa24.22■■□□□ 1.47
SRRT-209ENST00000474896 TMEM94Q12767 1356 aa24.21■■□□□ 1.47
SRRT-209ENST00000474896 RBM33Q96EV2 1170 aaKnown RBP24.21■■□□□ 1.47
SRRT-209ENST00000474896 ADGRL2O95490 1459 aa24.2■■□□□ 1.47
SRRT-209ENST00000474896 TET3O43151 1660 aa24.19■■□□□ 1.46
SRRT-209ENST00000474896 FAM135BQ49AJ0 1406 aa24.18■■□□□ 1.46
SRRT-209ENST00000474896 ANKRD50Q9ULJ7 1429 aa24.18■■□□□ 1.46
SRRT-209ENST00000474896 ADGRB3O60242 1522 aa24.15■■□□□ 1.46
SRRT-209ENST00000474896 RGS17Q9UGC6 210 aaPredicted RBP24.14■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 145 ms