RNA–Protein interactions for RNA: ENST00000474887.5

DNMT3A-211, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-211ENST00000474887 STRCQ7RTU9 1775 aa21.88■■□□□ 1.09
DNMT3A-211ENST00000474887 KDM5DQ9BY66 1539 aa21.86■■□□□ 1.09
DNMT3A-211ENST00000474887 PLA2R1Q13018 1463 aa21.85■■□□□ 1.09
DNMT3A-211ENST00000474887 PZPP20742 1482 aa21.84■■□□□ 1.09
DNMT3A-211ENST00000474887 SHANK2Q9UPX8 1470 aa21.83■■□□□ 1.08
DNMT3A-211ENST00000474887 TNRQ92752 1358 aa21.82■■□□□ 1.08
DNMT3A-211ENST00000474887 CAMSAP1Q5T5Y3 1602 aa21.81■■□□□ 1.08
DNMT3A-211ENST00000474887 A2ML1A8K2U0 1454 aa21.81■■□□□ 1.08
DNMT3A-211ENST00000474887 FGD6Q6ZV73 1430 aa21.8■■□□□ 1.08
DNMT3A-211ENST00000474887 DUOX2Q9NRD8 1548 aa21.8■■□□□ 1.08
DNMT3A-211ENST00000474887 CEP170BQ9Y4F5 1589 aaPredicted RBP21.8■■□□□ 1.08
DNMT3A-211ENST00000474887 ABCC5O15440 1437 aa21.8■■□□□ 1.08
DNMT3A-211ENST00000474887 ZNF142P52746 1687 aaPredicted RBP21.79■■□□□ 1.08
DNMT3A-211ENST00000474887 TCOF1Q13428 1488 aaKnown RBP21.79■■□□□ 1.08
DNMT3A-211ENST00000474887 EIF2AK4Q9P2K8 1649 aaKnown RBP21.79■■□□□ 1.08
DNMT3A-211ENST00000474887 MYO3AQ8NEV4 1616 aa21.78■■□□□ 1.08
DNMT3A-211ENST00000474887 FBXO31Q5XUX0 539 aaPredicted RBP21.78■■□□□ 1.08
DNMT3A-211ENST00000474887 RNF17Q9BXT8 1623 aaKnown RBP21.77■■□□□ 1.08
DNMT3A-211ENST00000474887 PTPN23Q9H3S7 1636 aa21.77■■□□□ 1.08
DNMT3A-211ENST00000474887 KIF15Q9NS87 1388 aa21.77■■□□□ 1.08
DNMT3A-211ENST00000474887 THEMISQ8N1K5 641 aaPredicted RBP21.77■■□□□ 1.08
DNMT3A-211ENST00000474887 NLRP1Q9C000 1473 aa21.76■■□□□ 1.07
DNMT3A-211ENST00000474887 NCKAP5LQ9HCH0 1330 aa21.76■■□□□ 1.07
DNMT3A-211ENST00000474887 ERBINQ96RT1 1412 aa21.75■■□□□ 1.07
DNMT3A-211ENST00000474887 ANKRD30AQ9BXX3 1397 aa21.74■■□□□ 1.07
DNMT3A-211ENST00000474887 DAPK1P53355 1430 aa21.74■■□□□ 1.07
DNMT3A-211ENST00000474887 IQSEC2Q5JU85 1478 aa21.73■■□□□ 1.07
DNMT3A-211ENST00000474887 RRP7BPQ9NSQ0 103 aa21.73■■□□□ 1.07
DNMT3A-211ENST00000474887 ZC3H13Q5T200 1668 aaKnown RBP21.72■■□□□ 1.07
DNMT3A-211ENST00000474887 ABCC3O15438 1527 aa21.72■■□□□ 1.07
DNMT3A-211ENST00000474887 ANKLE2Q86XL3 938 aa21.71■■□□□ 1.07
DNMT3A-211ENST00000474887 DNMT1P26358 1616 aaKnown RBP21.7■■□□□ 1.06
DNMT3A-211ENST00000474887 KANK1Q14678 1352 aa21.69■■□□□ 1.06
DNMT3A-211ENST00000474887 ARHGAP31Q2M1Z3 1444 aa21.69■■□□□ 1.06
DNMT3A-211ENST00000474887 LTBP4Q8N2S1 1624 aa21.67■■□□□ 1.06
DNMT3A-211ENST00000474887 CROCC2H7BZ55 1655 aa21.66■■□□□ 1.06
DNMT3A-211ENST00000474887 SPATA31D1Q6ZQQ2 1576 aa21.65■■□□□ 1.06
DNMT3A-211ENST00000474887 FAM50AQ14320 339 aaKnown RBP21.64■■□□□ 1.05
DNMT3A-211ENST00000474887 MROH1Q8NDA8 1641 aa21.64■■□□□ 1.05
DNMT3A-211ENST00000474887 UGGT1Q9NYU2 1555 aa21.63■■□□□ 1.05
DNMT3A-211ENST00000474887 CHIC2Q9UKJ5 165 aa21.63■■□□□ 1.05
DNMT3A-211ENST00000474887 PRDM15P57071 1507 aaPredicted RBP21.63■■□□□ 1.05
DNMT3A-211ENST00000474887 ADGRL2O95490 1459 aa21.63■■□□□ 1.05
DNMT3A-211ENST00000474887 ERVK-7P63135 1459 aa21.63■■□□□ 1.05
DNMT3A-211ENST00000474887 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.61■■□□□ 1.05
DNMT3A-211ENST00000474887 ZNF335Q9H4Z2 1342 aaPredicted RBP21.6■■□□□ 1.05
DNMT3A-211ENST00000474887 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.6■■□□□ 1.051e-6■■□□□ 13
DNMT3A-211ENST00000474887 MED14O60244 1454 aa21.59■■□□□ 1.05
DNMT3A-211ENST00000474887 LMTK2Q8IWU2 1503 aa21.57■■□□□ 1.04
DNMT3A-211ENST00000474887 DEPDC5O75140 1603 aa21.57■■□□□ 1.04
DNMT3A-211ENST00000474887 NPHP4O75161 1426 aaPredicted RBP21.55■■□□□ 1.04
DNMT3A-211ENST00000474887 ANKRD50Q9ULJ7 1429 aa21.55■■□□□ 1.04
DNMT3A-211ENST00000474887 ROCK1Q13464 1354 aa21.53■■□□□ 1.04
DNMT3A-211ENST00000474887 VWDEQ8N2E2 1590 aa21.53■■□□□ 1.04
DNMT3A-211ENST00000474887 CEP152O94986 1710 aa21.52■■□□□ 1.04
DNMT3A-211ENST00000474887 POLR1AO95602 1720 aaPredicted RBP21.52■■□□□ 1.04
DNMT3A-211ENST00000474887 CPS1P31327 1500 aa21.52■■□□□ 1.04
DNMT3A-211ENST00000474887 EID1Q9Y6B2 187 aa21.52■■□□□ 1.04
DNMT3A-211ENST00000474887 NEURL4Q96JN8 1562 aa21.52■■□□□ 1.04
DNMT3A-211ENST00000474887 SLC52A1Q9NWF4 448 aa21.51■■□□□ 1.03
DNMT3A-211ENST00000474887 UBAP1LF5GYI3 381 aa21.49■■□□□ 1.03
DNMT3A-211ENST00000474887 STAG3Q9UJ98 1225 aa21.49■■□□□ 1.03
DNMT3A-211ENST00000474887 TXNDC2Q86VQ3 553 aa21.48■■□□□ 1.03
DNMT3A-211ENST00000474887 RPRD2Q5VT52 1461 aaKnown RBP21.47■■□□□ 1.03
DNMT3A-211ENST00000474887 SLIT1O75093 1534 aa21.47■■□□□ 1.03
DNMT3A-211ENST00000474887 ARHGAP23Q9P227 1491 aa21.46■■□□□ 1.03
DNMT3A-211ENST00000474887 IDI1Q13907 227 aa21.46■■□□□ 1.03
DNMT3A-211ENST00000474887 NOS1P29475 1434 aa21.46■■□□□ 1.03
DNMT3A-211ENST00000474887 SCAF11Q99590 1463 aaKnown RBP21.45■■□□□ 1.03
DNMT3A-211ENST00000474887 TOM1O60784 492 aa21.45■■□□□ 1.02
DNMT3A-211ENST00000474887 TMEM2Q9UHN6 1383 aa21.44■■□□□ 1.02
DNMT3A-211ENST00000474887 UBR1Q8IWV7 1749 aa21.43■■□□□ 1.02
DNMT3A-211ENST00000474887 CFAP65Q6ZU64 1925 aaKnown RBP21.43■■□□□ 1.02
DNMT3A-211ENST00000474887 EFCAB6Q5THR3 1501 aa21.43■■□□□ 1.02
DNMT3A-211ENST00000474887 KDM5AP29375 1690 aaKnown RBP21.43■■□□□ 1.02
DNMT3A-211ENST00000474887 LTKP29376 864 aa21.42■■□□□ 1.02
DNMT3A-211ENST00000474887 HDGFP51858 240 aaKnown RBP21.42■■□□□ 1.02
DNMT3A-211ENST00000474887 IQGAP1P46940 1657 aa21.41■■□□□ 1.02
DNMT3A-211ENST00000474887 PIK3C2BO00750 1634 aa21.36■■□□□ 1.01
DNMT3A-211ENST00000474887 TET3O43151 1660 aa21.34■■□□□ 1.01
DNMT3A-211ENST00000474887 UNC13BO14795 1591 aa21.34■■□□□ 1.01
DNMT3A-211ENST00000474887 SYNMO15061 1565 aa21.33■■□□□ 1.01
DNMT3A-211ENST00000474887 ITGAEP38570 1179 aa21.32■■□□□ 1
DNMT3A-211ENST00000474887 NUP155O75694 1391 aa21.32■■□□□ 1
DNMT3A-211ENST00000474887 RRBP1Q9P2E9 1410 aaKnown RBP21.31■■□□□ 1
DNMT3A-211ENST00000474887 PPARGC1BQ86YN6 1023 aaKnown RBP21.31■■□□□ 1
DNMT3A-211ENST00000474887 ADGRB3O60242 1522 aa21.3■■□□□ 1
DNMT3A-211ENST00000474887 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.3■■□□□ 1
DNMT3A-211ENST00000474887 LRRC7Q96NW7 1537 aa21.29■■□□□ 1
DNMT3A-211ENST00000474887 KCNA6P17658 529 aa21.29■■□□□ 1
DNMT3A-211ENST00000474887 GCC2Q8IWJ2 1684 aa21.28■■□□□ 1
DNMT3A-211ENST00000474887 IQGAP3Q86VI3 1631 aa21.26■□□□□ 0.99
DNMT3A-211ENST00000474887 DISP3Q9P2K9 1392 aa21.26■□□□□ 0.99
DNMT3A-211ENST00000474887 PIP4K2BP78356 416 aa21.26■□□□□ 0.99
DNMT3A-211ENST00000474887 SCAF1Q9H7N4 1312 aaKnown RBP21.26■□□□□ 0.99
DNMT3A-211ENST00000474887 PLEKHG1Q9ULL1 1385 aa21.23■□□□□ 0.99
DNMT3A-211ENST00000474887 PPP1R15AO75807 674 aaPredicted RBP21.23■□□□□ 0.99
DNMT3A-211ENST00000474887 BCANQ96GW7 911 aa21.23■□□□□ 0.99
DNMT3A-211ENST00000474887 ZFYVE9O95405 1425 aa21.22■□□□□ 0.99
DNMT3A-211ENST00000474887 SLC26A8Q96RN1 970 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms