RNA–Protein interactions for RNA: ENST00000474873.5

HPS1-210, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 2

Gene HPS1, Length 698 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-210ENST00000474873 PTPRMP28827 1452 aa12.22□□□□□ -0.45
HPS1-210ENST00000474873 PTPRKQ15262 1439 aa12.21□□□□□ -0.45
HPS1-210ENST00000474873 CNTLNQ9NXG0 1405 aa12.2□□□□□ -0.46
HPS1-210ENST00000474873 ROCK1Q13464 1354 aa12.2□□□□□ -0.46
HPS1-210ENST00000474873 ITGAEP38570 1179 aa12.2□□□□□ -0.46
HPS1-210ENST00000474873 FER1L4A9Z1Z3 1794 aa12.2□□□□□ -0.46
HPS1-210ENST00000474873 ERBINQ96RT1 1412 aa12.2□□□□□ -0.46
HPS1-210ENST00000474873 RIMS1Q86UR5 1692 aaKnown RBP12.19□□□□□ -0.46
HPS1-210ENST00000474873 EIF2AK4Q9P2K8 1649 aaKnown RBP12.18□□□□□ -0.46
HPS1-210ENST00000474873 WASHC2CQ9Y4E1 1318 aa12.16□□□□□ -0.46
HPS1-210ENST00000474873 CEBPAP49715 358 aaPredicted RBP12.16□□□□□ -0.46
HPS1-210ENST00000474873 CERKQ8TCT0 537 aa12.16□□□□□ -0.46
HPS1-210ENST00000474873 ANKRD50Q9ULJ7 1429 aa12.16□□□□□ -0.46
HPS1-210ENST00000474873 ZMYM3Q14202 1370 aa12.16□□□□□ -0.46
HPS1-210ENST00000474873 FAM135AQ9P2D6 1515 aa12.16□□□□□ -0.46
HPS1-210ENST00000474873 RNF17Q9BXT8 1623 aaKnown RBP12.15□□□□□ -0.47
HPS1-210ENST00000474873 PLPPR3Q6T4P5 718 aa12.14□□□□□ -0.47
HPS1-210ENST00000474873 MROH2AA6NES4 1674 aa12.13□□□□□ -0.47
HPS1-210ENST00000474873 KDM5DQ9BY66 1539 aa12.12□□□□□ -0.47
HPS1-210ENST00000474873 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.12□□□□□ -0.47
HPS1-210ENST00000474873 KANK1Q14678 1352 aa12.12□□□□□ -0.47
HPS1-210ENST00000474873 CLTCQ00610 1675 aaKnown RBP12.12□□□□□ -0.47
HPS1-210ENST00000474873 MROH1Q8NDA8 1641 aa12.11□□□□□ -0.47
HPS1-210ENST00000474873 NPATQ14207 1427 aa12.11□□□□□ -0.47
HPS1-210ENST00000474873 SETD1BQ9UPS6 1966 aaKnown RBP12.1□□□□□ -0.47
HPS1-210ENST00000474873 C3P01024 1663 aa12.1□□□□□ -0.47
HPS1-210ENST00000474873 DEPDC5O75140 1603 aa12.1□□□□□ -0.47
HPS1-210ENST00000474873 ABCC3O15438 1527 aa12.1□□□□□ -0.47
HPS1-210ENST00000474873 PRDM15P57071 1507 aaPredicted RBP12.1□□□□□ -0.47
HPS1-210ENST00000474873 NAIPQ13075 1403 aa12.09□□□□□ -0.47
HPS1-210ENST00000474873 ZC3H13Q5T200 1668 aaKnown RBP12.08□□□□□ -0.48
HPS1-210ENST00000474873 HFM1A2PYH4 1435 aa12.08□□□□□ -0.48
HPS1-210ENST00000474873 PZPP20742 1482 aa12.08□□□□□ -0.48
HPS1-210ENST00000474873 VWDEQ8N2E2 1590 aa12.06□□□□□ -0.48
HPS1-210ENST00000474873 ARHGAP31Q2M1Z3 1444 aa12.06□□□□□ -0.48
HPS1-210ENST00000474873 FBXO31Q5XUX0 539 aaPredicted RBP12.06□□□□□ -0.48
HPS1-210ENST00000474873 LMTK2Q8IWU2 1503 aa12.06□□□□□ -0.48
HPS1-210ENST00000474873 NUP155O75694 1391 aa12.05□□□□□ -0.48
HPS1-210ENST00000474873 UHRF1BP1Q6BDS2 1440 aa12.04□□□□□ -0.48
HPS1-210ENST00000474873 UNC13BO14795 1591 aa12.04□□□□□ -0.48
HPS1-210ENST00000474873 PREX1Q8TCU6 1659 aa12.03□□□□□ -0.48
HPS1-210ENST00000474873 CEP152O94986 1710 aa12.03□□□□□ -0.48
HPS1-210ENST00000474873 CAMSAP1Q5T5Y3 1602 aa12.03□□□□□ -0.48
HPS1-210ENST00000474873 GCC2Q8IWJ2 1684 aa12.03□□□□□ -0.48
HPS1-210ENST00000474873 TNRQ92752 1358 aa12.03□□□□□ -0.48
HPS1-210ENST00000474873 ACIN1Q9UKV3 1341 aaKnown RBP12.02□□□□□ -0.49
HPS1-210ENST00000474873 HSPA2P54652 639 aa12.01□□□□□ -0.49
HPS1-210ENST00000474873 ERVK-7P63135 1459 aa12.01□□□□□ -0.49
HPS1-210ENST00000474873 RPRD2Q5VT52 1461 aaKnown RBP12□□□□□ -0.49
HPS1-210ENST00000474873 EFCAB6Q5THR3 1501 aa12□□□□□ -0.49
HPS1-210ENST00000474873 IQGAP3Q86VI3 1631 aa12□□□□□ -0.49
HPS1-210ENST00000474873 TRIM52Q96A61 297 aa11.99□□□□□ -0.49
HPS1-210ENST00000474873 SETD5Q9C0A6 1442 aa11.99□□□□□ -0.49
HPS1-210ENST00000474873 NLRP1Q9C000 1473 aa11.99□□□□□ -0.49
HPS1-210ENST00000474873 TET3O43151 1660 aa11.99□□□□□ -0.49
HPS1-210ENST00000474873 A2ML1A8K2U0 1454 aa11.98□□□□□ -0.49
HPS1-210ENST00000474873 CFAP65Q6ZU64 1925 aaKnown RBP11.98□□□□□ -0.49
HPS1-210ENST00000474873 MYO3AQ8NEV4 1616 aa11.97□□□□□ -0.49
HPS1-210ENST00000474873 NOS1P29475 1434 aa11.97□□□□□ -0.49
HPS1-210ENST00000474873 SLC52A1Q9NWF4 448 aa11.97□□□□□ -0.49
HPS1-210ENST00000474873 CEP170BQ9Y4F5 1589 aaPredicted RBP11.96□□□□□ -0.49
HPS1-210ENST00000474873 HRCP23327 699 aa11.96□□□□□ -0.49
HPS1-210ENST00000474873 THEMISQ8N1K5 641 aaPredicted RBP11.96□□□□□ -0.49
HPS1-210ENST00000474873 ZNF142P52746 1687 aaPredicted RBP11.95□□□□□ -0.5
HPS1-210ENST00000474873 SLC4A1APQ9BWU0 796 aaKnown RBP11.95□□□□□ -0.5
HPS1-210ENST00000474873 RAB3GAP2Q9H2M9 1393 aa11.94□□□□□ -0.5
HPS1-210ENST00000474873 IDI1Q13907 227 aa11.94□□□□□ -0.5
HPS1-210ENST00000474873 E9PCH4 1651 aa11.94□□□□□ -0.5
HPS1-210ENST00000474873 PKD2Q13563 968 aa11.93□□□□□ -0.5
HPS1-210ENST00000474873 DMRT2Q9Y5R5 561 aa11.93□□□□□ -0.5
HPS1-210ENST00000474873 UGGT1Q9NYU2 1555 aa11.92□□□□□ -0.5
HPS1-210ENST00000474873 PLA2R1Q13018 1463 aa11.92□□□□□ -0.5
HPS1-210ENST00000474873 TRIM26Q12899 539 aaPredicted RBP11.92□□□□□ -0.5
HPS1-210ENST00000474873 MPHOSPH9Q99550 1183 aa11.92□□□□□ -0.5
HPS1-210ENST00000474873 PTPRTO14522 1441 aa11.92□□□□□ -0.5
HPS1-210ENST00000474873 SYNMO15061 1565 aa11.92□□□□□ -0.5
HPS1-210ENST00000474873 STAG3Q9UJ98 1225 aa11.91□□□□□ -0.5
HPS1-210ENST00000474873 ANKLE2Q86XL3 938 aa11.9□□□□□ -0.5
HPS1-210ENST00000474873 NCKAP5LQ9HCH0 1330 aa11.89□□□□□ -0.51
HPS1-210ENST00000474873 STRCQ7RTU9 1775 aa11.89□□□□□ -0.51
HPS1-210ENST00000474873 KDM5AP29375 1690 aaKnown RBP11.88□□□□□ -0.51
HPS1-210ENST00000474873 PIK3C2BO00750 1634 aa11.88□□□□□ -0.51
HPS1-210ENST00000474873 UBR1Q8IWV7 1749 aa11.88□□□□□ -0.51
HPS1-210ENST00000474873 TMEM2Q9UHN6 1383 aa11.87□□□□□ -0.51
HPS1-210ENST00000474873 EID1Q9Y6B2 187 aa11.86□□□□□ -0.51
HPS1-210ENST00000474873 SPHKAPQ2M3C7 1700 aa11.86□□□□□ -0.51
HPS1-210ENST00000474873 ADGRB3O60242 1522 aa11.86□□□□□ -0.51
HPS1-210ENST00000474873 SLIT1O75093 1534 aa11.86□□□□□ -0.51
HPS1-210ENST00000474873 ARHGAP23Q9P227 1491 aa11.85□□□□□ -0.51
HPS1-210ENST00000474873 CHGAP10645 457 aaKnown RBP11.85□□□□□ -0.51
HPS1-210ENST00000474873 HDGFP51858 240 aaKnown RBP11.85□□□□□ -0.51
HPS1-210ENST00000474873 FOXD1Q16676 465 aa11.85□□□□□ -0.51
HPS1-210ENST00000474873 TXNDC2Q86VQ3 553 aa11.85□□□□□ -0.51
HPS1-210ENST00000474873 TRPM2O94759 1503 aa11.85□□□□□ -0.51
HPS1-210ENST00000474873 LTKP29376 864 aa11.84□□□□□ -0.51
HPS1-210ENST00000474873 MED14O60244 1454 aa11.83□□□□□ -0.52
HPS1-210ENST00000474873 TMEM131LA2VDJ0 1609 aa11.83□□□□□ -0.52
HPS1-210ENST00000474873 SCAF11Q99590 1463 aaKnown RBP11.83□□□□□ -0.52
HPS1-210ENST00000474873 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.82□□□□□ -0.52
HPS1-210ENST00000474873 NPHP4O75161 1426 aaPredicted RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms