RNA–Protein interactions for RNA: ENST00000474725.5

EDEM3-206, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 2

Gene EDEM3, Length 1,911 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-206ENST00000474725 ZMYM4Q5VZL5 1548 aa29.62■■■□□ 2.33
EDEM3-206ENST00000474725 FOXD1Q16676 465 aa29.62■■■□□ 2.33
EDEM3-206ENST00000474725 YEATS2Q9ULM3 1422 aa29.6■■■□□ 2.33
EDEM3-206ENST00000474725 DIP2CQ9Y2E4 1556 aa29.59■■■□□ 2.33
EDEM3-206ENST00000474725 KIF3BO15066 747 aa29.58■■■□□ 2.33
EDEM3-206ENST00000474725 MAGI2Q86UL8 1455 aa29.58■■■□□ 2.33
EDEM3-206ENST00000474725 EIF2AK4Q9P2K8 1649 aaKnown RBP29.58■■■□□ 2.33
EDEM3-206ENST00000474725 NEUROD1Q13562 356 aa29.57■■■□□ 2.32
EDEM3-206ENST00000474725 FAM135AQ9P2D6 1515 aa29.57■■■□□ 2.32
EDEM3-206ENST00000474725 PKD2Q13563 968 aa29.57■■■□□ 2.32
EDEM3-206ENST00000474725 IQGAP3Q86VI3 1631 aa29.53■■■□□ 2.32
EDEM3-206ENST00000474725 DEPDC5O75140 1603 aa29.53■■■□□ 2.32
EDEM3-206ENST00000474725 ANKRD30BQ9BXX2 1392 aa29.51■■■□□ 2.31
EDEM3-206ENST00000474725 MROH1Q8NDA8 1641 aa29.46■■■□□ 2.31
EDEM3-206ENST00000474725 ATP10AO60312 1499 aa29.46■■■□□ 2.31
EDEM3-206ENST00000474725 PRDM15P57071 1507 aaPredicted RBP29.44■■■□□ 2.3
EDEM3-206ENST00000474725 KANK1Q14678 1352 aa29.44■■■□□ 2.3
EDEM3-206ENST00000474725 BCORL1Q5H9F3 1711 aa29.44■■■□□ 2.3
EDEM3-206ENST00000474725 RNF17Q9BXT8 1623 aaKnown RBP29.43■■■□□ 2.3
EDEM3-206ENST00000474725 VWDEQ8N2E2 1590 aa29.43■■■□□ 2.3
EDEM3-206ENST00000474725 GGT6Q6P531 493 aa29.4■■■□□ 2.3
EDEM3-206ENST00000474725 TIMELESSQ9UNS1 1208 aa29.38■■■□□ 2.29
EDEM3-206ENST00000474725 ARHGEF40Q8TER5 1519 aa29.38■■■□□ 2.29
EDEM3-206ENST00000474725 REREQ9P2R6 1566 aa29.37■■■□□ 2.29
EDEM3-206ENST00000474725 TONSLQ96HA7 1378 aa29.34■■■□□ 2.29
EDEM3-206ENST00000474725 RPRD2Q5VT52 1461 aaKnown RBP29.34■■■□□ 2.29
EDEM3-206ENST00000474725 TET3O43151 1660 aa29.33■■■□□ 2.29
EDEM3-206ENST00000474725 E9PCH4 1651 aa29.31■■■□□ 2.28
EDEM3-206ENST00000474725 AGLP35573 1532 aa29.3■■■□□ 2.28
EDEM3-206ENST00000474725 LMTK2Q8IWU2 1503 aa29.3■■■□□ 2.28
EDEM3-206ENST00000474725 CEP152O94986 1710 aa29.29■■■□□ 2.28
EDEM3-206ENST00000474725 PLA2R1Q13018 1463 aa29.29■■■□□ 2.28
EDEM3-206ENST00000474725 SIGLEC1Q9BZZ2 1709 aa29.29■■■□□ 2.28
EDEM3-206ENST00000474725 WASHC2CQ9Y4E1 1318 aa29.27■■■□□ 2.28
EDEM3-206ENST00000474725 ABCC3O15438 1527 aa29.25■■■□□ 2.27
EDEM3-206ENST00000474725 EFCAB6Q5THR3 1501 aa29.24■■■□□ 2.27
EDEM3-206ENST00000474725 PPP1R15AO75807 674 aaPredicted RBP29.24■■■□□ 2.27
EDEM3-206ENST00000474725 L3MBTL2Q969R5 705 aa29.21■■■□□ 2.27
EDEM3-206ENST00000474725 CCDC144AA2RUR9 1427 aa29.2■■■□□ 2.27
EDEM3-206ENST00000474725 PTPRTO14522 1441 aa29.19■■■□□ 2.26
EDEM3-206ENST00000474725 SPHKAPQ2M3C7 1700 aa29.17■■■□□ 2.26
EDEM3-206ENST00000474725 ZC3H13Q5T200 1668 aaKnown RBP29.17■■■□□ 2.26
EDEM3-206ENST00000474725 CAMSAP1Q5T5Y3 1602 aa29.16■■■□□ 2.26
EDEM3-206ENST00000474725 MLECQ14165 292 aa29.16■■■□□ 2.26
EDEM3-206ENST00000474725 NPATQ14207 1427 aa29.15■■■□□ 2.26
EDEM3-206ENST00000474725 TRPM2O94759 1503 aa29.14■■■□□ 2.26
EDEM3-206ENST00000474725 PPP6R1Q9UPN7 881 aa29.14■■■□□ 2.25
EDEM3-206ENST00000474725 ARID4BQ4LE39 1312 aaPredicted RBP29.13■■■□□ 2.25
EDEM3-206ENST00000474725 ARHGAP31Q2M1Z3 1444 aa29.09■■■□□ 2.25
EDEM3-206ENST00000474725 CLTCL1P53675 1640 aa29.07■■■□□ 2.24
EDEM3-206ENST00000474725 CFAP65Q6ZU64 1925 aaKnown RBP29.05■■■□□ 2.24
EDEM3-206ENST00000474725 CLTCQ00610 1675 aaKnown RBP29.05■■■□□ 2.24
EDEM3-206ENST00000474725 RGL3Q3MIN7 710 aa29.03■■■□□ 2.24
EDEM3-206ENST00000474725 UGGT1Q9NYU2 1555 aa29.02■■■□□ 2.24
EDEM3-206ENST00000474725 CNTLNQ9NXG0 1405 aa29.01■■■□□ 2.24
EDEM3-206ENST00000474725 NOS1P29475 1434 aa29.01■■■□□ 2.23
EDEM3-206ENST00000474725 SPATA31E1Q6ZUB1 1445 aa28.99■■■□□ 2.23
EDEM3-206ENST00000474725 NBPF8Q3BBV2 869 aa28.98■■■□□ 2.23
EDEM3-206ENST00000474725 ESF1Q9H501 851 aaKnown RBP28.98■■■□□ 2.23
EDEM3-206ENST00000474725 DCAF11Q8TEB1 546 aa28.98■■■□□ 2.23
EDEM3-206ENST00000474725 KDM2AQ9Y2K7 1162 aa28.96■■■□□ 2.23
EDEM3-206ENST00000474725 SYNMO15061 1565 aa28.95■■■□□ 2.22
EDEM3-206ENST00000474725 PREX1Q8TCU6 1659 aa28.94■■■□□ 2.22
EDEM3-206ENST00000474725 FBXO31Q5XUX0 539 aaPredicted RBP28.94■■■□□ 2.22
EDEM3-206ENST00000474725 ZNF316A6NFI3 1004 aaPredicted RBP28.94■■■□□ 2.22
EDEM3-206ENST00000474725 ZMYM3Q14202 1370 aa28.92■■■□□ 2.22
EDEM3-206ENST00000474725 ZNF326Q5BKZ1 582 aaKnown RBP28.91■■■□□ 2.22
EDEM3-206ENST00000474725 KIF1BO60333 1816 aa28.91■■■□□ 2.22
EDEM3-206ENST00000474725 UHRF1BP1Q6BDS2 1440 aa28.9■■■□□ 2.22
EDEM3-206ENST00000474725 ERVK-7P63135 1459 aa28.9■■■□□ 2.22
EDEM3-206ENST00000474725 NEURL4Q96JN8 1562 aa28.88■■■□□ 2.21
EDEM3-206ENST00000474725 PIK3C2BO00750 1634 aa28.88■■■□□ 2.21
EDEM3-206ENST00000474725 CHGAP10645 457 aaKnown RBP28.86■■■□□ 2.21
EDEM3-206ENST00000474725 IDI1Q13907 227 aa28.85■■■□□ 2.21
EDEM3-206ENST00000474725 SLC52A1Q9NWF4 448 aa28.85■■■□□ 2.21
EDEM3-206ENST00000474725 MROH2AA6NES4 1674 aa28.85■■■□□ 2.21
EDEM3-206ENST00000474725 ADGRB3O60242 1522 aa28.84■■■□□ 2.21
EDEM3-206ENST00000474725 SPATA31D1Q6ZQQ2 1576 aa28.84■■■□□ 2.21
EDEM3-206ENST00000474725 PRAG1Q86YV5 1406 aa28.81■■■□□ 2.2
EDEM3-206ENST00000474725 FER1L4A9Z1Z3 1794 aa28.79■■■□□ 2.2
EDEM3-206ENST00000474725 STAC3Q96MF2 364 aa28.77■■■□□ 2.2
EDEM3-206ENST00000474725 RALGAPBQ86X10 1494 aa28.76■■■□□ 2.19
EDEM3-206ENST00000474725 CEBPAP49715 358 aaPredicted RBP28.74■■■□□ 2.19
EDEM3-206ENST00000474725 HIRIP3Q9BW71 556 aaPredicted RBP28.74■■■□□ 2.19
EDEM3-206ENST00000474725 IFT172Q9UG01 1749 aa28.73■■■□□ 2.19
EDEM3-206ENST00000474725 TMEM131LA2VDJ0 1609 aa28.71■■■□□ 2.19
EDEM3-206ENST00000474725 C3P01024 1663 aa28.71■■■□□ 2.19
EDEM3-206ENST00000474725 TRPM1Q7Z4N2 1603 aa28.71■■■□□ 2.19
EDEM3-206ENST00000474725 MADDQ8WXG6 1647 aa28.71■■■□□ 2.19
EDEM3-206ENST00000474725 RPGRIP1LQ68CZ1 1315 aa28.71■■■□□ 2.19
EDEM3-206ENST00000474725 TNRQ92752 1358 aa28.7■■■□□ 2.18
EDEM3-206ENST00000474725 MYOM2P54296 1465 aa28.7■■■□□ 2.18
EDEM3-206ENST00000474725 HSPA5P11021 654 aaKnown RBP28.69■■■□□ 2.18
EDEM3-206ENST00000474725 EIF4G2P78344 907 aaKnown RBP eCLIP28.69■■■□□ 2.18
EDEM3-206ENST00000474725 PPLO60437 1756 aa28.67■■■□□ 2.18
EDEM3-206ENST00000474725 ADGRF5Q8IZF2 1346 aa28.67■■■□□ 2.18
EDEM3-206ENST00000474725 MYO5BQ9ULV0 1848 aa28.67■■■□□ 2.18
EDEM3-206ENST00000474725 ADAMTSL3P82987 1691 aa28.67■■■□□ 2.18
EDEM3-206ENST00000474725 PLPPR3Q6T4P5 718 aa28.67■■■□□ 2.18
EDEM3-206ENST00000474725 STAG3Q9UJ98 1225 aa28.67■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms