RNA–Protein interactions for RNA: ENST00000474642.1

RTN4R-206, Transcript of reticulon 4 receptor, humanhuman

TSL 4

Gene RTN4R, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-206ENST00000474642 ANKLE2Q86XL3 938 aa21.66■■□□□ 1.06
RTN4R-206ENST00000474642 FBXO31Q5XUX0 539 aaPredicted RBP21.65■■□□□ 1.06
RTN4R-206ENST00000474642 NEURL4Q96JN8 1562 aa21.64■■□□□ 1.05
RTN4R-206ENST00000474642 SENP3Q9H4L4 574 aaPredicted RBP21.62■■□□□ 1.05
RTN4R-206ENST00000474642 THEMISQ8N1K5 641 aaPredicted RBP21.61■■□□□ 1.05
RTN4R-206ENST00000474642 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.61■■□□□ 1.05
RTN4R-206ENST00000474642 KIF3BO15066 747 aa21.6■■□□□ 1.05
RTN4R-206ENST00000474642 ZNF644Q9H582 1327 aaPredicted RBP21.59■■□□□ 1.05
RTN4R-206ENST00000474642 DHX29Q7Z478 1369 aaKnown RBP21.59■■□□□ 1.05
RTN4R-206ENST00000474642 MTUS2Q5JR59 1369 aa21.58■■□□□ 1.04
RTN4R-206ENST00000474642 VWDEQ8N2E2 1590 aa21.57■■□□□ 1.04
RTN4R-206ENST00000474642 PZPP20742 1482 aa21.57■■□□□ 1.04
RTN4R-206ENST00000474642 WASHC2CQ9Y4E1 1318 aa21.56■■□□□ 1.04
RTN4R-206ENST00000474642 RTEL1-TNFRSF6BF6WH68 1400 aa21.56■■□□□ 1.04
RTN4R-206ENST00000474642 NPHP4O75161 1426 aaPredicted RBP21.56■■□□□ 1.04
RTN4R-206ENST00000474642 ALKQ9UM73 1620 aa21.54■■□□□ 1.04
RTN4R-206ENST00000474642 KDM5DQ9BY66 1539 aa21.54■■□□□ 1.04
RTN4R-206ENST00000474642 FAM135AQ9P2D6 1515 aa21.54■■□□□ 1.04
RTN4R-206ENST00000474642 MIA2Q96PC5 1412 aa21.54■■□□□ 1.04
RTN4R-206ENST00000474642 MBD5Q9P267 1494 aa21.53■■□□□ 1.04
RTN4R-206ENST00000474642 UGGT1Q9NYU2 1555 aa21.53■■□□□ 1.04
RTN4R-206ENST00000474642 MED14O60244 1454 aa21.52■■□□□ 1.04
RTN4R-206ENST00000474642 NLRP1Q9C000 1473 aa21.52■■□□□ 1.04
RTN4R-206ENST00000474642 CHIC1Q5VXU3 224 aa21.51■■□□□ 1.03
RTN4R-206ENST00000474642 DEPDC5O75140 1603 aa21.5■■□□□ 1.03
RTN4R-206ENST00000474642 IQGAP1P46940 1657 aa21.48■■□□□ 1.03
RTN4R-206ENST00000474642 TIAM1Q13009 1591 aa21.48■■□□□ 1.03
RTN4R-206ENST00000474642 LRRC7Q96NW7 1537 aa21.47■■□□□ 1.03
RTN4R-206ENST00000474642 RNF17Q9BXT8 1623 aaKnown RBP21.44■■□□□ 1.02
RTN4R-206ENST00000474642 RGS17Q9UGC6 210 aaPredicted RBP21.44■■□□□ 1.02
RTN4R-206ENST00000474642 STRCP1A6NGW2 1772 aa21.43■■□□□ 1.02
RTN4R-206ENST00000474642 RSPH4AQ5TD94 716 aa21.43■■□□□ 1.02
RTN4R-206ENST00000474642 CCDC141Q6ZP82 1450 aa21.43■■□□□ 1.02
RTN4R-206ENST00000474642 SYNMO15061 1565 aa21.41■■□□□ 1.02
RTN4R-206ENST00000474642 EHBP1L1Q8N3D4 1523 aa21.4■■□□□ 1.02
RTN4R-206ENST00000474642 CEP162Q5TB80 1403 aa21.39■■□□□ 1.02
RTN4R-206ENST00000474642 TSPY4P0CV99 314 aa21.37■■□□□ 1.01
RTN4R-206ENST00000474642 TSPY10P0CW01 314 aa21.37■■□□□ 1.01
RTN4R-206ENST00000474642 CAMSAP2Q08AD1 1489 aa21.36■■□□□ 1.01
RTN4R-206ENST00000474642 CFAP65Q6ZU64 1925 aaKnown RBP21.32■■□□□ 1
RTN4R-206ENST00000474642 ERVK-7P63135 1459 aa21.32■■□□□ 1
RTN4R-206ENST00000474642 SCAF11Q99590 1463 aaKnown RBP21.32■■□□□ 1
RTN4R-206ENST00000474642 ABCC3O15438 1527 aa21.31■■□□□ 1
RTN4R-206ENST00000474642 POTEAQ6S8J7 498 aa21.31■■□□□ 1
RTN4R-206ENST00000474642 TXNDC2Q86VQ3 553 aa21.31■■□□□ 1
RTN4R-206ENST00000474642 ZC3H13Q5T200 1668 aaKnown RBP21.31■■□□□ 1
RTN4R-206ENST00000474642 NCOA2Q15596 1464 aa21.29■■□□□ 1
RTN4R-206ENST00000474642 LTKP29376 864 aa21.29■■□□□ 1
RTN4R-206ENST00000474642 ARHGEF5Q12774 1597 aa21.27■■□□□ 1
RTN4R-206ENST00000474642 UBR1Q8IWV7 1749 aa21.27■■□□□ 1
RTN4R-206ENST00000474642 EID1Q9Y6B2 187 aa21.27■■□□□ 1
RTN4R-206ENST00000474642 FAM135BQ49AJ0 1406 aa21.27■■□□□ 1
RTN4R-206ENST00000474642 XIRP1Q702N8 1843 aaKnown RBP21.25■□□□□ 0.99
RTN4R-206ENST00000474642 ARHGAP23Q9P227 1491 aa21.22■□□□□ 0.99
RTN4R-206ENST00000474642 SLIT1O75093 1534 aa21.21■□□□□ 0.99
RTN4R-206ENST00000474642 CEP152O94986 1710 aa21.21■□□□□ 0.99
RTN4R-206ENST00000474642 TMEM94Q12767 1356 aa21.2■□□□□ 0.98
RTN4R-206ENST00000474642 EIF2AK4Q9P2K8 1649 aaKnown RBP21.19■□□□□ 0.98
RTN4R-206ENST00000474642 STAG3Q9UJ98 1225 aa21.19■□□□□ 0.98
RTN4R-206ENST00000474642 PROSER2Q86WR7 435 aaPredicted RBP21.17■□□□□ 0.98
RTN4R-206ENST00000474642 MAST1Q9Y2H9 1570 aa21.17■□□□□ 0.98
RTN4R-206ENST00000474642 MROH1Q8NDA8 1641 aa21.17■□□□□ 0.98
RTN4R-206ENST00000474642 KCNA6P17658 529 aa21.16■□□□□ 0.98
RTN4R-206ENST00000474642 ROBO1Q9Y6N7 1651 aa21.15■□□□□ 0.98
RTN4R-206ENST00000474642 TMEM2Q9UHN6 1383 aa21.14■□□□□ 0.98
RTN4R-206ENST00000474642 RBM33Q96EV2 1170 aaKnown RBP21.14■□□□□ 0.97
RTN4R-206ENST00000474642 ARHGAP31Q2M1Z3 1444 aa21.12■□□□□ 0.97
RTN4R-206ENST00000474642 SETD1AO15047 1707 aaKnown RBP21.12■□□□□ 0.97
RTN4R-206ENST00000474642 DUOX2Q9NRD8 1548 aa21.11■□□□□ 0.97
RTN4R-206ENST00000474642 SLC26A8Q96RN1 970 aa21.11■□□□□ 0.97
RTN4R-206ENST00000474642 LRRC9Q6ZRR7 1453 aa21.11■□□□□ 0.97
RTN4R-206ENST00000474642 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.1■□□□□ 0.97
RTN4R-206ENST00000474642 PIK3C2BO00750 1634 aa21.1■□□□□ 0.97
RTN4R-206ENST00000474642 MAP3K1Q13233 1512 aa21.09■□□□□ 0.97
RTN4R-206ENST00000474642 MSH6P52701 1360 aa21.08■□□□□ 0.96
RTN4R-206ENST00000474642 JCADQ9P266 1359 aa21.08■□□□□ 0.96
RTN4R-206ENST00000474642 BCANQ96GW7 911 aa21.07■□□□□ 0.96
RTN4R-206ENST00000474642 SLAIN2Q9P270 581 aa21.07■□□□□ 0.96
RTN4R-206ENST00000474642 EFCAB6Q5THR3 1501 aa21.06■□□□□ 0.96
RTN4R-206ENST00000474642 PRDM15P57071 1507 aaPredicted RBP21.05■□□□□ 0.96
RTN4R-206ENST00000474642 PHLPP1O60346 1717 aa21.05■□□□□ 0.96
RTN4R-206ENST00000474642 IDI1Q13907 227 aa21.05■□□□□ 0.96
RTN4R-206ENST00000474642 KIF15Q9NS87 1388 aa21.05■□□□□ 0.96
RTN4R-206ENST00000474642 RRP7BPQ9NSQ0 103 aa21.04■□□□□ 0.96
RTN4R-206ENST00000474642 KANK1Q14678 1352 aa21.04■□□□□ 0.96
RTN4R-206ENST00000474642 MYOM3Q5VTT5 1437 aa21.04■□□□□ 0.96
RTN4R-206ENST00000474642 NKTRP30414 1462 aaKnown RBP21.03■□□□□ 0.96
RTN4R-206ENST00000474642 TET3O43151 1660 aa21.02■□□□□ 0.96
RTN4R-206ENST00000474642 MEX3CQ5U5Q3 659 aaKnown RBP21.02■□□□□ 0.96
RTN4R-206ENST00000474642 UPF1Q92900 1129 aaKnown RBP eCLIP21.02■□□□□ 0.96
RTN4R-206ENST00000474642 ERBINQ96RT1 1412 aa21.02■□□□□ 0.96
RTN4R-206ENST00000474642 KDM5AP29375 1690 aaKnown RBP21.01■□□□□ 0.95
RTN4R-206ENST00000474642 ZNF772Q68DY9 489 aaPredicted RBP21■□□□□ 0.95
RTN4R-206ENST00000474642 TRIM52Q96A61 297 aa21■□□□□ 0.95
RTN4R-206ENST00000474642 NWD1Q149M9 1564 aa20.98■□□□□ 0.95
RTN4R-206ENST00000474642 SPATA31A6Q5VVP1 1343 aa20.97■□□□□ 0.95
RTN4R-206ENST00000474642 KANK4Q5T7N3 995 aaPredicted RBP20.96■□□□□ 0.95
RTN4R-206ENST00000474642 C14orf37Q86TY3 774 aa20.94■□□□□ 0.94
RTN4R-206ENST00000474642 COL16A1Q07092 1604 aaPredicted RBP20.93■□□□□ 0.94
RTN4R-206ENST00000474642 ABCC5O15440 1437 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms