RNA–Protein interactions for RNA: ENST00000474637.5

GAPVD1-216, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 2,545 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-216ENST00000474637 MADDQ8WXG6 1647 aa6.26□□□□□ -1.41
GAPVD1-216ENST00000474637 CNTLNQ9NXG0 1405 aa6.26□□□□□ -1.41
GAPVD1-216ENST00000474637 RIMS1Q86UR5 1692 aaKnown RBP6.26□□□□□ -1.41
GAPVD1-216ENST00000474637 ERBINQ96RT1 1412 aa6.26□□□□□ -1.41
GAPVD1-216ENST00000474637 ESF1Q9H501 851 aaKnown RBP6.26□□□□□ -1.41
GAPVD1-216ENST00000474637 ROCK1Q13464 1354 aa6.26□□□□□ -1.41
GAPVD1-216ENST00000474637 MLECQ14165 292 aa6.25□□□□□ -1.41
GAPVD1-216ENST00000474637 KIF15Q9NS87 1388 aa6.25□□□□□ -1.41
GAPVD1-216ENST00000474637 RNF17Q9BXT8 1623 aaKnown RBP6.25□□□□□ -1.41
GAPVD1-216ENST00000474637 KCNA4P22459 653 aa6.25□□□□□ -1.41
GAPVD1-216ENST00000474637 PTPRMP28827 1452 aa6.25□□□□□ -1.41
GAPVD1-216ENST00000474637 MROH2AA6NES4 1674 aa6.25□□□□□ -1.41
GAPVD1-216ENST00000474637 NCOA1Q15788 1441 aa6.24□□□□□ -1.41
GAPVD1-216ENST00000474637 CHIC2Q9UKJ5 165 aa6.24□□□□□ -1.41
GAPVD1-216ENST00000474637 KIF3BO15066 747 aa6.23□□□□□ -1.41
GAPVD1-216ENST00000474637 CCER1Q8TC90 406 aaPredicted RBP6.23□□□□□ -1.41
GAPVD1-216ENST00000474637 RRP7BPQ9NSQ0 103 aa6.23□□□□□ -1.41
GAPVD1-216ENST00000474637 ZC3H13Q5T200 1668 aaKnown RBP6.23□□□□□ -1.41
GAPVD1-216ENST00000474637 KDM5DQ9BY66 1539 aa6.23□□□□□ -1.41
GAPVD1-216ENST00000474637 PTPRKQ15262 1439 aa6.22□□□□□ -1.41
GAPVD1-216ENST00000474637 GGT6Q6P531 493 aa6.22□□□□□ -1.41
GAPVD1-216ENST00000474637 CLTCQ00610 1675 aaKnown RBP6.22□□□□□ -1.41
GAPVD1-216ENST00000474637 DEPDC5O75140 1603 aa6.22□□□□□ -1.41
GAPVD1-216ENST00000474637 MSH5O43196 834 aa6.22□□□□□ -1.41
GAPVD1-216ENST00000474637 KANK1Q14678 1352 aa6.21□□□□□ -1.41
GAPVD1-216ENST00000474637 ANKRD50Q9ULJ7 1429 aa6.21□□□□□ -1.41
GAPVD1-216ENST00000474637 PRDM15P57071 1507 aaPredicted RBP6.21□□□□□ -1.42
GAPVD1-216ENST00000474637 C3P01024 1663 aa6.21□□□□□ -1.42
GAPVD1-216ENST00000474637 ITGAEP38570 1179 aa6.21□□□□□ -1.42
GAPVD1-216ENST00000474637 PPP4R3CPQ6ZMV5 832 aa6.21□□□□□ -1.42
GAPVD1-216ENST00000474637 WASHC2CQ9Y4E1 1318 aa6.2□□□□□ -1.42
GAPVD1-216ENST00000474637 NPATQ14207 1427 aa6.2□□□□□ -1.42
GAPVD1-216ENST00000474637 MROH1Q8NDA8 1641 aa6.2□□□□□ -1.42
GAPVD1-216ENST00000474637 GCC2Q8IWJ2 1684 aa6.2□□□□□ -1.42
GAPVD1-216ENST00000474637 ZMYM3Q14202 1370 aa6.2□□□□□ -1.42
GAPVD1-216ENST00000474637 ACIN1Q9UKV3 1341 aaKnown RBP6.2□□□□□ -1.42
GAPVD1-216ENST00000474637 ABCC3O15438 1527 aa6.19□□□□□ -1.42
GAPVD1-216ENST00000474637 LMTK2Q8IWU2 1503 aa6.19□□□□□ -1.42
GAPVD1-216ENST00000474637 UNC13BO14795 1591 aa6.19□□□□□ -1.42
GAPVD1-216ENST00000474637 VWDEQ8N2E2 1590 aa6.19□□□□□ -1.42
GAPVD1-216ENST00000474637 PREX1Q8TCU6 1659 aa6.19□□□□□ -1.42
GAPVD1-216ENST00000474637 HFM1A2PYH4 1435 aa6.19□□□□□ -1.42
GAPVD1-216ENST00000474637 PZPP20742 1482 aa6.18□□□□□ -1.42
GAPVD1-216ENST00000474637 CEP152O94986 1710 aa6.18□□□□□ -1.42
GAPVD1-216ENST00000474637 SETD1BQ9UPS6 1966 aaKnown RBP6.18□□□□□ -1.42
GAPVD1-216ENST00000474637 ARHGAP31Q2M1Z3 1444 aa6.18□□□□□ -1.42
GAPVD1-216ENST00000474637 CAMSAP1Q5T5Y3 1602 aa6.18□□□□□ -1.42
GAPVD1-216ENST00000474637 NAIPQ13075 1403 aa6.17□□□□□ -1.42
GAPVD1-216ENST00000474637 CEBPAP49715 358 aaPredicted RBP6.17□□□□□ -1.42
GAPVD1-216ENST00000474637 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.17□□□□□ -1.42
GAPVD1-216ENST00000474637 UHRF1BP1Q6BDS2 1440 aa6.17□□□□□ -1.42
GAPVD1-216ENST00000474637 IQGAP3Q86VI3 1631 aa6.16□□□□□ -1.42
GAPVD1-216ENST00000474637 TET3O43151 1660 aa6.16□□□□□ -1.42
GAPVD1-216ENST00000474637 SPATA31D1Q6ZQQ2 1576 aa6.16□□□□□ -1.42
GAPVD1-216ENST00000474637 MYT1Q01538 1121 aa6.16□□□□□ -1.42
GAPVD1-216ENST00000474637 EFCAB6Q5THR3 1501 aa6.16□□□□□ -1.42
GAPVD1-216ENST00000474637 RPRD2Q5VT52 1461 aaKnown RBP6.15□□□□□ -1.42
GAPVD1-216ENST00000474637 ZNF142P52746 1687 aaPredicted RBP6.15□□□□□ -1.42
GAPVD1-216ENST00000474637 TNRQ92752 1358 aa6.15□□□□□ -1.42
GAPVD1-216ENST00000474637 LMTK3Q96Q04 1460 aa6.15□□□□□ -1.42
GAPVD1-216ENST00000474637 MYO3AQ8NEV4 1616 aa6.15□□□□□ -1.43
GAPVD1-216ENST00000474637 ERVK-7P63135 1459 aa6.15□□□□□ -1.43
GAPVD1-216ENST00000474637 NLRP1Q9C000 1473 aa6.15□□□□□ -1.43
GAPVD1-216ENST00000474637 NUP155O75694 1391 aa6.14□□□□□ -1.43
GAPVD1-216ENST00000474637 A2ML1A8K2U0 1454 aa6.14□□□□□ -1.43
GAPVD1-216ENST00000474637 SETD5Q9C0A6 1442 aa6.14□□□□□ -1.43
GAPVD1-216ENST00000474637 CEP170BQ9Y4F5 1589 aaPredicted RBP6.13□□□□□ -1.43
GAPVD1-216ENST00000474637 FBXO31Q5XUX0 539 aaPredicted RBP6.13□□□□□ -1.43
GAPVD1-216ENST00000474637 TRIM52Q96A61 297 aa6.12□□□□□ -1.43
GAPVD1-216ENST00000474637 E9PCH4 1651 aa6.12□□□□□ -1.43
GAPVD1-216ENST00000474637 KDM5AP29375 1690 aaKnown RBP6.12□□□□□ -1.43
GAPVD1-216ENST00000474637 NOS1P29475 1434 aa6.12□□□□□ -1.43
GAPVD1-216ENST00000474637 PLA2R1Q13018 1463 aa6.11□□□□□ -1.43
GAPVD1-216ENST00000474637 CFAP65Q6ZU64 1925 aaKnown RBP6.11□□□□□ -1.43
GAPVD1-216ENST00000474637 SLC52A1Q9NWF4 448 aa6.11□□□□□ -1.43
GAPVD1-216ENST00000474637 UGGT1Q9NYU2 1555 aa6.11□□□□□ -1.43
GAPVD1-216ENST00000474637 THEMISQ8N1K5 641 aaPredicted RBP6.1□□□□□ -1.43
GAPVD1-216ENST00000474637 SYNMO15061 1565 aa6.1□□□□□ -1.43
GAPVD1-216ENST00000474637 DIEXFQ68CQ4 756 aaKnown RBP6.1□□□□□ -1.43
GAPVD1-216ENST00000474637 DMRT2Q9Y5R5 561 aa6.1□□□□□ -1.43
GAPVD1-216ENST00000474637 SPHKAPQ2M3C7 1700 aa6.1□□□□□ -1.43
GAPVD1-216ENST00000474637 RAB3GAP2Q9H2M9 1393 aa6.1□□□□□ -1.43
GAPVD1-216ENST00000474637 PTPRTO14522 1441 aa6.09□□□□□ -1.43
GAPVD1-216ENST00000474637 PKD2Q13563 968 aa6.09□□□□□ -1.43
GAPVD1-216ENST00000474637 UBR1Q8IWV7 1749 aa6.09□□□□□ -1.43
GAPVD1-216ENST00000474637 PIK3C2BO00750 1634 aa6.09□□□□□ -1.43
GAPVD1-216ENST00000474637 SLC4A1APQ9BWU0 796 aaKnown RBP6.09□□□□□ -1.43
GAPVD1-216ENST00000474637 ADGRB3O60242 1522 aa6.09□□□□□ -1.43
GAPVD1-216ENST00000474637 HSPA2P54652 639 aa6.08□□□□□ -1.44
GAPVD1-216ENST00000474637 STAG3Q9UJ98 1225 aa6.08□□□□□ -1.44
GAPVD1-216ENST00000474637 TRPM2O94759 1503 aa6.08□□□□□ -1.44
GAPVD1-216ENST00000474637 STRCQ7RTU9 1775 aa6.08□□□□□ -1.44
GAPVD1-216ENST00000474637 POLR1AO95602 1720 aaPredicted RBP6.08□□□□□ -1.44
GAPVD1-216ENST00000474637 NEUROD1Q13562 356 aa6.08□□□□□ -1.44
GAPVD1-216ENST00000474637 SLIT1O75093 1534 aa6.08□□□□□ -1.44
GAPVD1-216ENST00000474637 IDI1Q13907 227 aa6.07□□□□□ -1.44
GAPVD1-216ENST00000474637 ANKLE2Q86XL3 938 aa6.07□□□□□ -1.44
GAPVD1-216ENST00000474637 MPHOSPH9Q99550 1183 aa6.07□□□□□ -1.44
GAPVD1-216ENST00000474637 HDGFP51858 240 aaKnown RBP6.07□□□□□ -1.44
GAPVD1-216ENST00000474637 GTF3C3Q9Y5Q9 886 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms