RNA–Protein interactions for RNA: ENST00000474158.1

ABCC4-204, Transcript of ATP binding cassette subfamily C member 4, human

TSL 2

Gene ABCC4, Length 697 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCC4-204	ENST00000474158	DNMT1	P26358	1616 aa	Known RBP	13.75	□□□□□ -0.21
ABCC4-204	ENST00000474158	KIF14	Q15058	1648 aa		13.75	□□□□□ -0.21
ABCC4-204	ENST00000474158	RBM42	Q9BTD8	480 aa	Known RBP	13.75	□□□□□ -0.21
ABCC4-204	ENST00000474158	ARHGAP5	Q13017	1502 aa		13.73	□□□□□ -0.21
ABCC4-204	ENST00000474158	CHRDL2	Q6WN34	429 aa		13.72	□□□□□ -0.21
ABCC4-204	ENST00000474158	UPF1	Q92900	1129 aa	Known RBP eCLIP	13.72	□□□□□ -0.21
ABCC4-204	ENST00000474158	CDC42BPB	Q9Y5S2	1711 aa		13.72	□□□□□ -0.21
ABCC4-204	ENST00000474158	FOXD4L1	Q9NU39	408 aa		13.71	□□□□□ -0.21
ABCC4-204	ENST00000474158	A2ML1	A8K2U0	1454 aa		13.69	□□□□□ -0.22
ABCC4-204	ENST00000474158	LRRC7	Q96NW7	1537 aa		13.69	□□□□□ -0.22
ABCC4-204	ENST00000474158	ITSN2	Q9NZM3	1697 aa		13.67	□□□□□ -0.22
ABCC4-204	ENST00000474158	RNF17	Q9BXT8	1623 aa	Known RBP	13.66	□□□□□ -0.22
ABCC4-204	ENST00000474158	ABCC1	P33527	1531 aa		13.65	□□□□□ -0.22
ABCC4-204	ENST00000474158	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	13.63	□□□□□ -0.23
ABCC4-204	ENST00000474158	XIRP1	Q702N8	1843 aa	Known RBP	13.63	□□□□□ -0.23
ABCC4-204	ENST00000474158	GGT6	Q6P531	493 aa		13.62	□□□□□ -0.23
ABCC4-204	ENST00000474158	FBXO31	Q5XUX0	539 aa	Predicted RBP	13.61	□□□□□ -0.23
ABCC4-204	ENST00000474158	ANKLE2	Q86XL3	938 aa		13.61	□□□□□ -0.23
ABCC4-204	ENST00000474158	ATP1B4	Q9UN42	357 aa	Predicted RBP	13.61	□□□□□ -0.23
ABCC4-204	ENST00000474158	NPHP4	O75161	1426 aa	Predicted RBP	13.61	□□□□□ -0.23
ABCC4-204	ENST00000474158	SAMD9L	Q8IVG5	1584 aa		13.6	□□□□□ -0.23
ABCC4-204	ENST00000474158	MED14	O60244	1454 aa		13.6	□□□□□ -0.23
ABCC4-204	ENST00000474158	IQGAP1	P46940	1657 aa		13.59	□□□□□ -0.23
ABCC4-204	ENST00000474158	PLXNC1	O60486	1568 aa		13.58	□□□□□ -0.23
ABCC4-204	ENST00000474158	TRO	Q12816	1431 aa	Predicted RBP	13.58	□□□□□ -0.24
ABCC4-204	ENST00000474158	PREX2	Q70Z35	1606 aa		13.58	□□□□□ -0.24
ABCC4-204	ENST00000474158	TRIM52	Q96A61	297 aa		13.58	□□□□□ -0.24
ABCC4-204	ENST00000474158	SYNM	O15061	1565 aa		13.58	□□□□□ -0.24
ABCC4-204	ENST00000474158	DEPDC5	O75140	1603 aa		13.57	□□□□□ -0.24
ABCC4-204	ENST00000474158	LRRIQ1	Q96JM4	1722 aa		13.57	□□□□□ -0.24
ABCC4-204	ENST00000474158	TNR	Q92752	1358 aa		13.56	□□□□□ -0.24
ABCC4-204	ENST00000474158	FAM135B	Q49AJ0	1406 aa		13.55	□□□□□ -0.24
ABCC4-204	ENST00000474158	CSRNP3	Q8WYN3	585 aa		13.54	□□□□□ -0.24
ABCC4-204	ENST00000474158	A2M	P01023	1474 aa		13.54	□□□□□ -0.24
ABCC4-204	ENST00000474158	CDC42BPA	Q5VT25	1732 aa		13.53	□□□□□ -0.24
ABCC4-204	ENST00000474158	CDK11A	Q9UQ88	783 aa	Predicted RBP	13.53	□□□□□ -0.24
ABCC4-204	ENST00000474158	SPAG9	O60271	1321 aa	Known RBP	13.53	□□□□□ -0.24
ABCC4-204	ENST00000474158	ROBO1	Q9Y6N7	1651 aa		13.53	□□□□□ -0.24
ABCC4-204	ENST00000474158	HNRNPM	P52272	730 aa	Known RBP eCLIP	13.52	□□□□□ -0.25
ABCC4-204	ENST00000474158	POLA2	Q14181	598 aa		13.52	□□□□□ -0.25
ABCC4-204	ENST00000474158	THEMIS	Q8N1K5	641 aa	Predicted RBP	13.52	□□□□□ -0.25
ABCC4-204	ENST00000474158	SP7	Q8TDD2	431 aa	Predicted RBP	13.52	□□□□□ -0.25
ABCC4-204	ENST00000474158	ZC3H13	Q5T200	1668 aa	Known RBP	13.52	□□□□□ -0.25
ABCC4-204	ENST00000474158	ATP7A	Q04656	1500 aa		13.51	□□□□□ -0.25
ABCC4-204	ENST00000474158	UGGT1	Q9NYU2	1555 aa		13.5	□□□□□ -0.25
ABCC4-204	ENST00000474158	SYCP2	Q9BX26	1530 aa		13.5	□□□□□ -0.25
ABCC4-204	ENST00000474158	ZNF777	Q9ULD5	760 aa	Predicted RBP	13.5	□□□□□ -0.25
ABCC4-204	ENST00000474158	INO80	Q9ULG1	1556 aa	Predicted RBP	13.49	□□□□□ -0.25
ABCC4-204	ENST00000474158	CLIP1	P30622	1438 aa		13.49	□□□□□ -0.25
ABCC4-204	ENST00000474158	LRP6	O75581	1613 aa		13.47	□□□□□ -0.25
ABCC4-204	ENST00000474158	FAM135A	Q9P2D6	1515 aa		13.47	□□□□□ -0.25
ABCC4-204	ENST00000474158	PZP	P20742	1482 aa		13.46	□□□□□ -0.25
ABCC4-204	ENST00000474158	MIA2	Q96PC5	1412 aa		13.46	□□□□□ -0.26
ABCC4-204	ENST00000474158	RBM33	Q96EV2	1170 aa	Known RBP	13.45	□□□□□ -0.26
ABCC4-204	ENST00000474158	PHLPP1	O60346	1717 aa		13.44	□□□□□ -0.26
ABCC4-204	ENST00000474158	ADGB	Q8N7X0	1667 aa		13.44	□□□□□ -0.26
ABCC4-204	ENST00000474158	NLRP1	Q9C000	1473 aa		13.43	□□□□□ -0.26
ABCC4-204	ENST00000474158	SETBP1	Q9Y6X0	1596 aa		13.43	□□□□□ -0.26
ABCC4-204	ENST00000474158	FMN1	Q68DA7	1419 aa		13.42	□□□□□ -0.26
ABCC4-204	ENST00000474158	JCAD	Q9P266	1359 aa		13.42	□□□□□ -0.26
ABCC4-204	ENST00000474158	EP400	Q96L91	3159 aa		13.42	□□□□□ -0.26
ABCC4-204	ENST00000474158	RXRB	P28702	533 aa		13.41	□□□□□ -0.26
ABCC4-204	ENST00000474158	LTK	P29376	864 aa		13.41	□□□□□ -0.26
ABCC4-204	ENST00000474158	ZNF772	Q68DY9	489 aa	Predicted RBP	13.41	□□□□□ -0.26
ABCC4-204	ENST00000474158	TMEM94	Q12767	1356 aa		13.4	□□□□□ -0.26
ABCC4-204	ENST00000474158	MAP3K1	Q13233	1512 aa		13.39	□□□□□ -0.27
ABCC4-204	ENST00000474158	ZBTB22	O15209	634 aa		13.39	□□□□□ -0.27
ABCC4-204	ENST00000474158	COL16A1	Q07092	1604 aa	Predicted RBP	13.39	□□□□□ -0.27
ABCC4-204	ENST00000474158	GPATCH8	Q9UKJ3	1502 aa	Known RBP	13.39	□□□□□ -0.27
ABCC4-204	ENST00000474158	ARHGAP35	Q9NRY4	1499 aa		13.38	□□□□□ -0.27
ABCC4-204	ENST00000474158	CFAP65	Q6ZU64	1925 aa	Known RBP	13.38	□□□□□ -0.27
ABCC4-204	ENST00000474158	KDM5D	Q9BY66	1539 aa		13.38	□□□□□ -0.27
ABCC4-204	ENST00000474158	KIF3B	O15066	747 aa		13.37	□□□□□ -0.27
ABCC4-204	ENST00000474158	MEX3C	Q5U5Q3	659 aa	Known RBP	13.37	□□□□□ -0.27
ABCC4-204	ENST00000474158	CDK12	Q9NYV4	1490 aa	Predicted RBP	13.36	□□□□□ -0.27
ABCC4-204	ENST00000474158	UBR1	Q8IWV7	1749 aa		13.36	□□□□□ -0.27
ABCC4-204	ENST00000474158	KIAA1107	Q9UPP5	1409 aa		13.36	□□□□□ -0.27
ABCC4-204	ENST00000474158	WASHC2C	Q9Y4E1	1318 aa		13.36	□□□□□ -0.27
ABCC4-204	ENST00000474158	SCAF11	Q99590	1463 aa	Known RBP	13.36	□□□□□ -0.27
ABCC4-204	ENST00000474158	ATF5	Q9Y2D1	282 aa	Predicted RBP	13.35	□□□□□ -0.27
ABCC4-204	ENST00000474158	DHX29	Q7Z478	1369 aa	Known RBP	13.34	□□□□□ -0.27
ABCC4-204	ENST00000474158	RGS12	O14924	1447 aa		13.34	□□□□□ -0.27
ABCC4-204	ENST00000474158	TXNDC2	Q86VQ3	553 aa		13.33	□□□□□ -0.28
ABCC4-204	ENST00000474158	EHMT2	Q96KQ7	1210 aa		13.33	□□□□□ -0.28
ABCC4-204	ENST00000474158	SLAIN2	Q9P270	581 aa		13.33	□□□□□ -0.28
ABCC4-204	ENST00000474158	NCOA2	Q15596	1464 aa		13.33	□□□□□ -0.28
ABCC4-204	ENST00000474158	ZNF644	Q9H582	1327 aa	Predicted RBP	13.33	□□□□□ -0.28
ABCC4-204	ENST00000474158	ATXN8OS	P0DMR3	200 aa		13.32	□□□□□ -0.28
ABCC4-204	ENST00000474158	ZRANB1	Q9UGI0	708 aa		13.32	□□□□□ -0.28
ABCC4-204	ENST00000474158	SPATA31A6	Q5VVP1	1343 aa		13.32	□□□□□ -0.28
ABCC4-204	ENST00000474158	LRRC9	Q6ZRR7	1453 aa		13.31	□□□□□ -0.28
ABCC4-204	ENST00000474158	PROSER2	Q86WR7	435 aa	Predicted RBP	13.31	□□□□□ -0.28
ABCC4-204	ENST00000474158	ZBTB12	Q9Y330	459 aa	Predicted RBP	13.31	□□□□□ -0.28
ABCC4-204	ENST00000474158	ARHGAP23	Q9P227	1491 aa		13.3	□□□□□ -0.28
ABCC4-204	ENST00000474158	NUTM2B	A6NNL0	878 aa	Predicted RBP	13.3	□□□□□ -0.28
ABCC4-204	ENST00000474158	NUTM2E	B1AL46	878 aa	Predicted RBP	13.3	□□□□□ -0.28
ABCC4-204	ENST00000474158	NUTM2D	Q5VT03	806 aa	Predicted RBP	13.3	□□□□□ -0.28
ABCC4-204	ENST00000474158	NUTM2A	Q8IVF1	878 aa	Predicted RBP	13.3	□□□□□ -0.28
ABCC4-204	ENST00000474158	AKT1S1	Q96B36	256 aa		13.3	□□□□□ -0.28
ABCC4-204	ENST00000474158	CFDP1	Q9UEE9	299 aa	Predicted RBP	13.3	□□□□□ -0.28

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