RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 NUP155O75694 1391 aa15.01□□□□□ -0.01
PRPF38A-202ENST00000474048 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.01□□□□□ -0.015e-7■■■□□ 14.9
PRPF38A-202ENST00000474048 SLC4A1APQ9BWU0 796 aaKnown RBP15.01□□□□□ -0.01
PRPF38A-202ENST00000474048 ARHGEF40Q8TER5 1519 aa15.01□□□□□ -0.01
PRPF38A-202ENST00000474048 KIF3BO15066 747 aa15□□□□□ -0.01
PRPF38A-202ENST00000474048 ATP10AO60312 1499 aa14.99□□□□□ -0.01
PRPF38A-202ENST00000474048 KDM5DQ9BY66 1539 aa14.98□□□□□ -0.01
PRPF38A-202ENST00000474048 YEATS2Q9ULM3 1422 aa14.98□□□□□ -0.01
PRPF38A-202ENST00000474048 DEPDC5O75140 1603 aa14.97□□□□□ -0.01
PRPF38A-202ENST00000474048 IQGAP3Q86VI3 1631 aa14.97□□□□□ -0.01
PRPF38A-202ENST00000474048 MPHOSPH9Q99550 1183 aa14.97□□□□□ -0.01
PRPF38A-202ENST00000474048 BCORL1Q5H9F3 1711 aa14.96□□□□□ -0.01
PRPF38A-202ENST00000474048 FAM135AQ9P2D6 1515 aa14.96□□□□□ -0.02
PRPF38A-202ENST00000474048 RNF17Q9BXT8 1623 aaKnown RBP14.95□□□□□ -0.02
PRPF38A-202ENST00000474048 REREQ9P2R6 1566 aa14.95□□□□□ -0.02
PRPF38A-202ENST00000474048 PRDM15P57071 1507 aaPredicted RBP14.94□□□□□ -0.02
PRPF38A-202ENST00000474048 COL17A1Q9UMD9 1497 aaPredicted RBP14.94□□□□□ -0.02
PRPF38A-202ENST00000474048 GGT6Q6P531 493 aa14.93□□□□□ -0.02
PRPF38A-202ENST00000474048 PZPP20742 1482 aa14.93□□□□□ -0.02
PRPF38A-202ENST00000474048 ARID4BQ4LE39 1312 aaPredicted RBP14.92□□□□□ -0.02
PRPF38A-202ENST00000474048 TET3O43151 1660 aa14.91□□□□□ -0.02
PRPF38A-202ENST00000474048 ZC3H13Q5T200 1668 aaKnown RBP14.91□□□□□ -0.02
PRPF38A-202ENST00000474048 PKD2Q13563 968 aa14.91□□□□□ -0.02
PRPF38A-202ENST00000474048 ESF1Q9H501 851 aaKnown RBP14.91□□□□□ -0.02
PRPF38A-202ENST00000474048 AGLP35573 1532 aa14.9□□□□□ -0.02
PRPF38A-202ENST00000474048 CEP152O94986 1710 aa14.89□□□□□ -0.03
PRPF38A-202ENST00000474048 WASHC2CQ9Y4E1 1318 aa14.89□□□□□ -0.03
PRPF38A-202ENST00000474048 NEUROD1Q13562 356 aa14.88□□□□□ -0.03
PRPF38A-202ENST00000474048 MROH1Q8NDA8 1641 aa14.87□□□□□ -0.03
PRPF38A-202ENST00000474048 TONSLQ96HA7 1378 aa14.86□□□□□ -0.03
PRPF38A-202ENST00000474048 FOXD1Q16676 465 aa14.85□□□□□ -0.03
PRPF38A-202ENST00000474048 VWDEQ8N2E2 1590 aa14.85□□□□□ -0.03
PRPF38A-202ENST00000474048 CAMSAP1Q5T5Y3 1602 aa14.84□□□□□ -0.03
PRPF38A-202ENST00000474048 EFCAB6Q5THR3 1501 aa14.84□□□□□ -0.03
PRPF38A-202ENST00000474048 LMTK2Q8IWU2 1503 aa14.84□□□□□ -0.03
PRPF38A-202ENST00000474048 MLECQ14165 292 aa14.84□□□□□ -0.03
PRPF38A-202ENST00000474048 E9PCH4 1651 aa14.84□□□□□ -0.03
PRPF38A-202ENST00000474048 PPP6R1Q9UPN7 881 aa14.83□□□□□ -0.04
PRPF38A-202ENST00000474048 SPHKAPQ2M3C7 1700 aa14.83□□□□□ -0.04
PRPF38A-202ENST00000474048 CCDC144AA2RUR9 1427 aa14.83□□□□□ -0.04
PRPF38A-202ENST00000474048 ABCC3O15438 1527 aa14.82□□□□□ -0.04
PRPF38A-202ENST00000474048 RPRD2Q5VT52 1461 aaKnown RBP14.82□□□□□ -0.04
PRPF38A-202ENST00000474048 ANKRD30BQ9BXX2 1392 aa14.81□□□□□ -0.04
PRPF38A-202ENST00000474048 CLTCQ00610 1675 aaKnown RBP14.81□□□□□ -0.04
PRPF38A-202ENST00000474048 SIN3AQ96ST3 1273 aa14.8□□□□□ -0.04
PRPF38A-202ENST00000474048 TIMELESSQ9UNS1 1208 aa14.8□□□□□ -0.04
PRPF38A-202ENST00000474048 PLPPR3Q6T4P5 718 aa14.78□□□□□ -0.04
PRPF38A-202ENST00000474048 SIGLEC1Q9BZZ2 1709 aa14.78□□□□□ -0.04
PRPF38A-202ENST00000474048 TRPM2O94759 1503 aa14.77□□□□□ -0.04
PRPF38A-202ENST00000474048 CNTLNQ9NXG0 1405 aa14.77□□□□□ -0.04
PRPF38A-202ENST00000474048 FER1L4A9Z1Z3 1794 aa14.76□□□□□ -0.05
PRPF38A-202ENST00000474048 ARHGAP31Q2M1Z3 1444 aa14.75□□□□□ -0.05
PRPF38A-202ENST00000474048 CFAP65Q6ZU64 1925 aaKnown RBP14.74□□□□□ -0.05
PRPF38A-202ENST00000474048 MROH2AA6NES4 1674 aa14.74□□□□□ -0.05
PRPF38A-202ENST00000474048 NPATQ14207 1427 aa14.74□□□□□ -0.05
PRPF38A-202ENST00000474048 KIF1BO60333 1816 aa14.73□□□□□ -0.05
PRPF38A-202ENST00000474048 PREX1Q8TCU6 1659 aa14.72□□□□□ -0.05
PRPF38A-202ENST00000474048 PTPRTO14522 1441 aa14.71□□□□□ -0.05
PRPF38A-202ENST00000474048 CLTCL1P53675 1640 aa14.7□□□□□ -0.06
PRPF38A-202ENST00000474048 CHGAP10645 457 aaKnown RBP14.69□□□□□ -0.06
PRPF38A-202ENST00000474048 STAG3Q9UJ98 1225 aa14.67□□□□□ -0.06
PRPF38A-202ENST00000474048 ERVK-7P63135 1459 aa14.67□□□□□ -0.06
PRPF38A-202ENST00000474048 PLA2R1Q13018 1463 aa14.67□□□□□ -0.06
PRPF38A-202ENST00000474048 RIMS1Q86UR5 1692 aaKnown RBP14.66□□□□□ -0.06
PRPF38A-202ENST00000474048 ZMYM3Q14202 1370 aa14.66□□□□□ -0.06
PRPF38A-202ENST00000474048 RGL3Q3MIN7 710 aa14.66□□□□□ -0.06
PRPF38A-202ENST00000474048 ZNF326Q5BKZ1 582 aaKnown RBP14.66□□□□□ -0.06
PRPF38A-202ENST00000474048 SLC52A1Q9NWF4 448 aa14.65□□□□□ -0.06
PRPF38A-202ENST00000474048 MADDQ8WXG6 1647 aa14.65□□□□□ -0.06
PRPF38A-202ENST00000474048 NOS1P29475 1434 aa14.65□□□□□ -0.06
PRPF38A-202ENST00000474048 SYNMO15061 1565 aa14.64□□□□□ -0.07
PRPF38A-202ENST00000474048 L3MBTL2Q969R5 705 aa14.64□□□□□ -0.07
PRPF38A-202ENST00000474048 SPATA31D1Q6ZQQ2 1576 aa14.64□□□□□ -0.07
PRPF38A-202ENST00000474048 UGGT1Q9NYU2 1555 aa14.64□□□□□ -0.07
PRPF38A-202ENST00000474048 C3P01024 1663 aa14.63□□□□□ -0.07
PRPF38A-202ENST00000474048 NEURL4Q96JN8 1562 aa14.63□□□□□ -0.07
PRPF38A-202ENST00000474048 PIK3C2BO00750 1634 aa14.63□□□□□ -0.07
PRPF38A-202ENST00000474048 PPP1R15AO75807 674 aaPredicted RBP14.62□□□□□ -0.07
PRPF38A-202ENST00000474048 DCAF11Q8TEB1 546 aa14.62□□□□□ -0.07
PRPF38A-202ENST00000474048 TNRQ92752 1358 aa14.61□□□□□ -0.07
PRPF38A-202ENST00000474048 KDM2AQ9Y2K7 1162 aa14.61□□□□□ -0.07
PRPF38A-202ENST00000474048 ADAMTSL3P82987 1691 aa14.61□□□□□ -0.07
PRPF38A-202ENST00000474048 ADGRB3O60242 1522 aa14.61□□□□□ -0.07
PRPF38A-202ENST00000474048 FBXO31Q5XUX0 539 aaPredicted RBP14.6□□□□□ -0.07
PRPF38A-202ENST00000474048 STAC3Q96MF2 364 aa14.6□□□□□ -0.07
PRPF38A-202ENST00000474048 SPATA31E1Q6ZUB1 1445 aa14.58□□□□□ -0.07
PRPF38A-202ENST00000474048 RPGRIP1LQ68CZ1 1315 aa14.57□□□□□ -0.08
PRPF38A-202ENST00000474048 NLRP1Q9C000 1473 aa14.57□□□□□ -0.08
PRPF38A-202ENST00000474048 IDI1Q13907 227 aa14.56□□□□□ -0.08
PRPF38A-202ENST00000474048 IFT172Q9UG01 1749 aa14.55□□□□□ -0.08
PRPF38A-202ENST00000474048 PPLO60437 1756 aa14.55□□□□□ -0.08
PRPF38A-202ENST00000474048 MYO5BQ9ULV0 1848 aa14.55□□□□□ -0.08
PRPF38A-202ENST00000474048 CEBPAP49715 358 aaPredicted RBP14.54□□□□□ -0.08
PRPF38A-202ENST00000474048 HDGFP51858 240 aaKnown RBP14.54□□□□□ -0.08
PRPF38A-202ENST00000474048 MYOM2P54296 1465 aa14.54□□□□□ -0.08
PRPF38A-202ENST00000474048 TMEM131LA2VDJ0 1609 aa14.54□□□□□ -0.08
PRPF38A-202ENST00000474048 KDM5AP29375 1690 aaKnown RBP14.54□□□□□ -0.08
PRPF38A-202ENST00000474048 MYO3AQ8NEV4 1616 aa14.53□□□□□ -0.08
PRPF38A-202ENST00000474048 UHRF1BP1Q6BDS2 1440 aa14.53□□□□□ -0.08
PRPF38A-202ENST00000474048 PRAG1Q86YV5 1406 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms