RNA–Protein interactions for RNA: ENST00000473680.1

PNCK-225, Transcript of pregnancy up-regulated nonubiquitous CaM kinase, human

TSL 2

Gene PNCK, Length 1,232 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PNCK-225	ENST00000473680	NCKAP5L	Q9HCH0	1330 aa		34.04	■■■■□ 3.04
PNCK-225	ENST00000473680	KDM5D	Q9BY66	1539 aa		34.04	■■■■□ 3.04
PNCK-225	ENST00000473680	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	34.03	■■■■□ 3.04
PNCK-225	ENST00000473680	FAM135A	Q9P2D6	1515 aa		34	■■■■□ 3.03
PNCK-225	ENST00000473680	ZNF142	P52746	1687 aa	Predicted RBP	34	■■■■□ 3.03
PNCK-225	ENST00000473680	FBXO31	Q5XUX0	539 aa	Predicted RBP	34	■■■■□ 3.03
PNCK-225	ENST00000473680	MAST1	Q9Y2H9	1570 aa		34	■■■■□ 3.03
PNCK-225	ENST00000473680	PKD2	Q13563	968 aa		33.98	■■■■□ 3.03
PNCK-225	ENST00000473680	TNR	Q92752	1358 aa		33.97	■■■■□ 3.03
PNCK-225	ENST00000473680	PZP	P20742	1482 aa		33.96	■■■■□ 3.03
PNCK-225	ENST00000473680	PLA2R1	Q13018	1463 aa		33.96	■■■■□ 3.03
PNCK-225	ENST00000473680	A2ML1	A8K2U0	1454 aa		33.95	■■■■□ 3.02
PNCK-225	ENST00000473680	TCOF1	Q13428	1488 aa	Known RBP	33.88	■■■■□ 3.01
PNCK-225	ENST00000473680	DNMT1	P26358	1616 aa	Known RBP	33.87	■■■■□ 3.01
PNCK-225	ENST00000473680	LTBP4	Q8N2S1	1624 aa		33.87	■■■■□ 3.01
PNCK-225	ENST00000473680	RNF17	Q9BXT8	1623 aa	Known RBP	33.86	■■■■□ 3.01
PNCK-225	ENST00000473680	PTPN23	Q9H3S7	1636 aa		33.86	■■■■□ 3.01
PNCK-225	ENST00000473680	EIF2AK4	Q9P2K8	1649 aa	Known RBP	33.85	■■■■□ 3.01
PNCK-225	ENST00000473680	DUOX2	Q9NRD8	1548 aa		33.84	■■■■□ 3.01
PNCK-225	ENST00000473680	ABCC5	O15440	1437 aa		33.84	■■■■□ 3.01
PNCK-225	ENST00000473680	RRP7BP	Q9NSQ0	103 aa		33.83	■■■■□ 3.01
PNCK-225	ENST00000473680	KIF15	Q9NS87	1388 aa		33.83	■■■■□ 3.01
PNCK-225	ENST00000473680	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	33.82	■■■■□ 3.01
PNCK-225	ENST00000473680	FGD6	Q6ZV73	1430 aa		33.82	■■■■□ 3
PNCK-225	ENST00000473680	ABCC3	O15438	1527 aa		33.82	■■■■□ 3
PNCK-225	ENST00000473680	SHANK2	Q9UPX8	1470 aa		33.81	■■■■□ 3
PNCK-225	ENST00000473680	THEMIS	Q8N1K5	641 aa	Predicted RBP	33.8	■■■■□ 3
PNCK-225	ENST00000473680	NLRP1	Q9C000	1473 aa		33.79	■■■■□ 3
PNCK-225	ENST00000473680	ZC3H13	Q5T200	1668 aa	Known RBP	33.78	■■■■□ 3
PNCK-225	ENST00000473680	DAPK1	P53355	1430 aa		33.78	■■■■□ 3
PNCK-225	ENST00000473680	IQSEC2	Q5JU85	1478 aa		33.76	■■■□□ 2.99
PNCK-225	ENST00000473680	CROCC2	H7BZ55	1655 aa		33.75	■■■□□ 2.99
PNCK-225	ENST00000473680	ANKLE2	Q86XL3	938 aa		33.75	■■■□□ 2.99
PNCK-225	ENST00000473680	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	33.74	■■■□□ 2.99
PNCK-225	ENST00000473680	ERBIN	Q96RT1	1412 aa		33.73	■■■□□ 2.99
PNCK-225	ENST00000473680	MROH1	Q8NDA8	1641 aa		33.73	■■■□□ 2.99
PNCK-225	ENST00000473680	CHIC2	Q9UKJ5	165 aa		33.73	■■■□□ 2.99
PNCK-225	ENST00000473680	UGGT1	Q9NYU2	1555 aa		33.72	■■■□□ 2.99
PNCK-225	ENST00000473680	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	33.71	■■■□□ 2.99	7e-8	■■■■□ 19.8
PNCK-225	ENST00000473680	ANKRD30A	Q9BXX3	1397 aa		33.69	■■■□□ 2.98
PNCK-225	ENST00000473680	ERVK-7	P63135	1459 aa		33.69	■■■□□ 2.98
PNCK-225	ENST00000473680	SPATA31D1	Q6ZQQ2	1576 aa		33.68	■■■□□ 2.98
PNCK-225	ENST00000473680	CEP152	O94986	1710 aa		33.67	■■■□□ 2.98
PNCK-225	ENST00000473680	POLR1A	O95602	1720 aa	Predicted RBP	33.67	■■■□□ 2.98
PNCK-225	ENST00000473680	FAM50A	Q14320	339 aa	Known RBP	33.66	■■■□□ 2.98
PNCK-225	ENST00000473680	KANK1	Q14678	1352 aa		33.64	■■■□□ 2.98
PNCK-225	ENST00000473680	NEURL4	Q96JN8	1562 aa		33.64	■■■□□ 2.98
PNCK-225	ENST00000473680	PRDM15	P57071	1507 aa	Predicted RBP	33.63	■■■□□ 2.97
PNCK-225	ENST00000473680	UBAP1L	F5GYI3	381 aa		33.62	■■■□□ 2.97
PNCK-225	ENST00000473680	NPHP4	O75161	1426 aa	Predicted RBP	33.58	■■■□□ 2.97
PNCK-225	ENST00000473680	ARHGAP31	Q2M1Z3	1444 aa		33.58	■■■□□ 2.97
PNCK-225	ENST00000473680	CFAP65	Q6ZU64	1925 aa	Known RBP	33.56	■■■□□ 2.96
PNCK-225	ENST00000473680	DEPDC5	O75140	1603 aa		33.54	■■■□□ 2.96
PNCK-225	ENST00000473680	MED14	O60244	1454 aa		33.54	■■■□□ 2.96
PNCK-225	ENST00000473680	CPS1	P31327	1500 aa		33.51	■■■□□ 2.95
PNCK-225	ENST00000473680	ADGRL2	O95490	1459 aa		33.5	■■■□□ 2.95
PNCK-225	ENST00000473680	STAG3	Q9UJ98	1225 aa		33.47	■■■□□ 2.95
PNCK-225	ENST00000473680	IQGAP1	P46940	1657 aa		33.46	■■■□□ 2.95
PNCK-225	ENST00000473680	UBR1	Q8IWV7	1749 aa		33.46	■■■□□ 2.95
PNCK-225	ENST00000473680	LMTK2	Q8IWU2	1503 aa		33.44	■■■□□ 2.94
PNCK-225	ENST00000473680	VWDE	Q8N2E2	1590 aa		33.44	■■■□□ 2.94
PNCK-225	ENST00000473680	TXNDC2	Q86VQ3	553 aa		33.43	■■■□□ 2.94
PNCK-225	ENST00000473680	DISP3	Q9P2K9	1392 aa		33.43	■■■□□ 2.94
PNCK-225	ENST00000473680	EID1	Q9Y6B2	187 aa		33.42	■■■□□ 2.94
PNCK-225	ENST00000473680	SCAF1	Q9H7N4	1312 aa	Known RBP	33.42	■■■□□ 2.94
PNCK-225	ENST00000473680	ANKRD50	Q9ULJ7	1429 aa		33.42	■■■□□ 2.94
PNCK-225	ENST00000473680	SCAF11	Q99590	1463 aa	Known RBP	33.41	■■■□□ 2.94
PNCK-225	ENST00000473680	TOM1	O60784	492 aa		33.4	■■■□□ 2.94
PNCK-225	ENST00000473680	LTK	P29376	864 aa		33.38	■■■□□ 2.93
PNCK-225	ENST00000473680	PIP4K2B	P78356	416 aa		33.38	■■■□□ 2.93
PNCK-225	ENST00000473680	IDI1	Q13907	227 aa		33.36	■■■□□ 2.93
PNCK-225	ENST00000473680	SLIT1	O75093	1534 aa		33.36	■■■□□ 2.93
PNCK-225	ENST00000473680	ARHGAP23	Q9P227	1491 aa		33.36	■■■□□ 2.93
PNCK-225	ENST00000473680	PIK3C2B	O00750	1634 aa		33.35	■■■□□ 2.93
PNCK-225	ENST00000473680	EFCAB6	Q5THR3	1501 aa		33.34	■■■□□ 2.93
PNCK-225	ENST00000473680	PPARGC1B	Q86YN6	1023 aa	Known RBP	33.34	■■■□□ 2.93
PNCK-225	ENST00000473680	TMEM2	Q9UHN6	1383 aa		33.33	■■■□□ 2.93
PNCK-225	ENST00000473680	ITGAE	P38570	1179 aa		33.29	■■■□□ 2.92
PNCK-225	ENST00000473680	NOS1	P29475	1434 aa		33.28	■■■□□ 2.92
PNCK-225	ENST00000473680	SLC52A1	Q9NWF4	448 aa		33.28	■■■□□ 2.92
PNCK-225	ENST00000473680	SYNM	O15061	1565 aa		33.27	■■■□□ 2.92
PNCK-225	ENST00000473680	ROCK1	Q13464	1354 aa		33.25	■■■□□ 2.91
PNCK-225	ENST00000473680	LRRC7	Q96NW7	1537 aa		33.24	■■■□□ 2.91
PNCK-225	ENST00000473680	RPRD2	Q5VT52	1461 aa	Known RBP	33.24	■■■□□ 2.91
PNCK-225	ENST00000473680	KDM5A	P29375	1690 aa	Known RBP	33.23	■■■□□ 2.91
PNCK-225	ENST00000473680	STRCP1	A6NGW2	1772 aa		33.21	■■■□□ 2.91
PNCK-225	ENST00000473680	HSPA1L	P34931	641 aa		33.21	■■■□□ 2.91
PNCK-225	ENST00000473680	ADGRB3	O60242	1522 aa		33.18	■■■□□ 2.9
PNCK-225	ENST00000473680	TET3	O43151	1660 aa		33.18	■■■□□ 2.9
PNCK-225	ENST00000473680	BCAN	Q96GW7	911 aa		33.17	■■■□□ 2.9
PNCK-225	ENST00000473680	UNC13B	O14795	1591 aa		33.16	■■■□□ 2.9
PNCK-225	ENST00000473680	ILDR2	Q71H61	639 aa		33.15	■■■□□ 2.9
PNCK-225	ENST00000473680	SLC26A8	Q96RN1	970 aa		33.14	■■■□□ 2.9
PNCK-225	ENST00000473680	GCC2	Q8IWJ2	1684 aa		33.1	■■■□□ 2.89
PNCK-225	ENST00000473680	NUP155	O75694	1391 aa		33.1	■■■□□ 2.89
PNCK-225	ENST00000473680	CHGA	P10645	457 aa	Known RBP	33.1	■■■□□ 2.89
PNCK-225	ENST00000473680	HDGF	P51858	240 aa	Known RBP	33.09	■■■□□ 2.89
PNCK-225	ENST00000473680	PPP1R15A	O75807	674 aa	Predicted RBP	33.08	■■■□□ 2.89
PNCK-225	ENST00000473680	ALK	Q9UM73	1620 aa		33.08	■■■□□ 2.89
PNCK-225	ENST00000473680	SENP3	Q9H4L4	574 aa	Predicted RBP	33.07	■■■□□ 2.88

Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms