RNA–Protein interactions for RNA: ENST00000473257.1

ACTB-209, Transcript of actin beta, humanhuman

TSL 3

Gene ACTB, Length 556 nt, Biotype processed transcript, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-209ENST00000473257 TNRQ92752 1358 aa17.9■□□□□ 0.46
ACTB-209ENST00000473257 A2ML1A8K2U0 1454 aa17.89■□□□□ 0.45
ACTB-209ENST00000473257 KANK4Q5T7N3 995 aaPredicted RBP17.89■□□□□ 0.45
ACTB-209ENST00000473257 PPP6R1Q9UPN7 881 aa17.89■□□□□ 0.45
ACTB-209ENST00000473257 WASHC2CQ9Y4E1 1318 aa17.88■□□□□ 0.45
ACTB-209ENST00000473257 IQSEC2Q5JU85 1478 aa17.86■□□□□ 0.45
ACTB-209ENST00000473257 KDM5DQ9BY66 1539 aa17.86■□□□□ 0.45
ACTB-209ENST00000473257 SPATA31D1Q6ZQQ2 1576 aa17.86■□□□□ 0.45
ACTB-209ENST00000473257 PZPP20742 1482 aa17.85■□□□□ 0.45
ACTB-209ENST00000473257 LRRC9Q6ZRR7 1453 aa17.85■□□□□ 0.45
ACTB-209ENST00000473257 VPS8Q8N3P4 1428 aa17.84■□□□□ 0.45
ACTB-209ENST00000473257 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.84■□□□□ 0.454e-28■■□□□ 12.2
ACTB-209ENST00000473257 NEURL4Q96JN8 1562 aa17.83■□□□□ 0.45
ACTB-209ENST00000473257 TSPY4P0CV99 314 aa17.83■□□□□ 0.44
ACTB-209ENST00000473257 TSPY10P0CW01 314 aa17.83■□□□□ 0.44
ACTB-209ENST00000473257 ARHGEF5Q12774 1597 aa17.83■□□□□ 0.44
ACTB-209ENST00000473257 MIA2Q96PC5 1412 aa17.81■□□□□ 0.44
ACTB-209ENST00000473257 SCAF1Q9H7N4 1312 aaKnown RBP17.8■□□□□ 0.44
ACTB-209ENST00000473257 PIP4K2BP78356 416 aa17.8■□□□□ 0.44
ACTB-209ENST00000473257 RSPH4AQ5TD94 716 aa17.8■□□□□ 0.44
ACTB-209ENST00000473257 POLR1AO95602 1720 aaPredicted RBP17.79■□□□□ 0.44
ACTB-209ENST00000473257 ABCC3O15438 1527 aa17.77■□□□□ 0.44
ACTB-209ENST00000473257 SOCS7O14512 581 aa17.77■□□□□ 0.44
ACTB-209ENST00000473257 ANKLE2Q86XL3 938 aa17.76■□□□□ 0.43
ACTB-209ENST00000473257 SHANK2Q9UPX8 1470 aa17.75■□□□□ 0.43
ACTB-209ENST00000473257 UGGT1Q9NYU2 1555 aa17.75■□□□□ 0.43
ACTB-209ENST00000473257 MROH1Q8NDA8 1641 aa17.75■□□□□ 0.43
ACTB-209ENST00000473257 RNF17Q9BXT8 1623 aaKnown RBP17.75■□□□□ 0.43
ACTB-209ENST00000473257 CFAP65Q6ZU64 1925 aaKnown RBP17.74■□□□□ 0.43
ACTB-209ENST00000473257 MYOM3Q5VTT5 1437 aa17.74■□□□□ 0.43
ACTB-209ENST00000473257 HSPA1LP34931 641 aa17.74■□□□□ 0.43
ACTB-209ENST00000473257 THEMISQ8N1K5 641 aaPredicted RBP17.74■□□□□ 0.43
ACTB-209ENST00000473257 SENP3Q9H4L4 574 aaPredicted RBP17.74■□□□□ 0.43
ACTB-209ENST00000473257 VWDEQ8N2E2 1590 aa17.74■□□□□ 0.43
ACTB-209ENST00000473257 MAST1Q9Y2H9 1570 aa17.74■□□□□ 0.43
ACTB-209ENST00000473257 NPHP4O75161 1426 aaPredicted RBP17.73■□□□□ 0.43
ACTB-209ENST00000473257 FAM135AQ9P2D6 1515 aa17.73■□□□□ 0.43
ACTB-209ENST00000473257 NLRP1Q9C000 1473 aa17.73■□□□□ 0.43
ACTB-209ENST00000473257 CEP152O94986 1710 aa17.72■□□□□ 0.43
ACTB-209ENST00000473257 ERVK-7P63135 1459 aa17.72■□□□□ 0.43
ACTB-209ENST00000473257 RRP7BPQ9NSQ0 103 aa17.71■□□□□ 0.43
ACTB-209ENST00000473257 CPS1P31327 1500 aa17.69■□□□□ 0.42
ACTB-209ENST00000473257 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.69■□□□□ 0.422e-37■□□□□ 8.4
ACTB-209ENST00000473257 ABCC5O15440 1437 aa17.68■□□□□ 0.42
ACTB-209ENST00000473257 STRCP1A6NGW2 1772 aa17.68■□□□□ 0.42
ACTB-209ENST00000473257 MED14O60244 1454 aa17.68■□□□□ 0.42
ACTB-209ENST00000473257 MAP3K1Q13233 1512 aa17.67■□□□□ 0.42
ACTB-209ENST00000473257 KIF15Q9NS87 1388 aa17.67■□□□□ 0.42
ACTB-209ENST00000473257 DEPDC5O75140 1603 aa17.67■□□□□ 0.42
ACTB-209ENST00000473257 EIF2AK4Q9P2K8 1649 aaKnown RBP17.67■□□□□ 0.42
ACTB-209ENST00000473257 ALKQ9UM73 1620 aa17.67■□□□□ 0.42
ACTB-209ENST00000473257 IQGAP1P46940 1657 aa17.67■□□□□ 0.42
ACTB-209ENST00000473257 TOM1O60784 492 aa17.66■□□□□ 0.42
ACTB-209ENST00000473257 CHIC2Q9UKJ5 165 aa17.66■□□□□ 0.42
ACTB-209ENST00000473257 ZC3H13Q5T200 1668 aaKnown RBP17.66■□□□□ 0.42
ACTB-209ENST00000473257 DUOX2Q9NRD8 1548 aa17.66■□□□□ 0.42
ACTB-209ENST00000473257 LTKP29376 864 aa17.64■□□□□ 0.41
ACTB-209ENST00000473257 PTPN23Q9H3S7 1636 aa17.64■□□□□ 0.41
ACTB-209ENST00000473257 UBR1Q8IWV7 1749 aa17.63■□□□□ 0.41
ACTB-209ENST00000473257 CROCC2H7BZ55 1655 aa17.62■□□□□ 0.41
ACTB-209ENST00000473257 LRRC7Q96NW7 1537 aa17.62■□□□□ 0.41
ACTB-209ENST00000473257 DAPK1P53355 1430 aa17.61■□□□□ 0.41
ACTB-209ENST00000473257 MED1Q15648 1581 aaPredicted RBP17.61■□□□□ 0.41
ACTB-209ENST00000473257 TXNDC2Q86VQ3 553 aa17.6■□□□□ 0.41
ACTB-209ENST00000473257 PRDM15P57071 1507 aaPredicted RBP17.6■□□□□ 0.41
ACTB-209ENST00000473257 SCAF11Q99590 1463 aaKnown RBP17.59■□□□□ 0.41
ACTB-209ENST00000473257 FGD6Q6ZV73 1430 aa17.59■□□□□ 0.41
ACTB-209ENST00000473257 APLP2Q06481 763 aa17.59■□□□□ 0.41
ACTB-209ENST00000473257 ERBINQ96RT1 1412 aa17.57■□□□□ 0.4
ACTB-209ENST00000473257 PIK3C2BO00750 1634 aa17.57■□□□□ 0.4
ACTB-209ENST00000473257 ARHGAP23Q9P227 1491 aa17.56■□□□□ 0.4
ACTB-209ENST00000473257 ARHGAP31Q2M1Z3 1444 aa17.55■□□□□ 0.4
ACTB-209ENST00000473257 SLIT1O75093 1534 aa17.54■□□□□ 0.4
ACTB-209ENST00000473257 RBM33Q96EV2 1170 aaKnown RBP17.54■□□□□ 0.4
ACTB-209ENST00000473257 IDI1Q13907 227 aa17.53■□□□□ 0.4
ACTB-209ENST00000473257 STAG3Q9UJ98 1225 aa17.53■□□□□ 0.4
ACTB-209ENST00000473257 FAM50AQ14320 339 aaKnown RBP17.52■□□□□ 0.4
ACTB-209ENST00000473257 KANK1Q14678 1352 aa17.52■□□□□ 0.39
ACTB-209ENST00000473257 ANKRD30AQ9BXX3 1397 aa17.52■□□□□ 0.39
ACTB-209ENST00000473257 TMEM2Q9UHN6 1383 aa17.52■□□□□ 0.39
ACTB-209ENST00000473257 SYNMO15061 1565 aa17.51■□□□□ 0.39
ACTB-209ENST00000473257 SLC26A8Q96RN1 970 aa17.51■□□□□ 0.39
ACTB-209ENST00000473257 EID1Q9Y6B2 187 aa17.51■□□□□ 0.39
ACTB-209ENST00000473257 XIRP1Q702N8 1843 aaKnown RBP17.5■□□□□ 0.39
ACTB-209ENST00000473257 PHF23Q9BUL5 403 aaPredicted RBP17.49■□□□□ 0.39
ACTB-209ENST00000473257 EFCAB6Q5THR3 1501 aa17.47■□□□□ 0.39
ACTB-209ENST00000473257 LMTK2Q8IWU2 1503 aa17.47■□□□□ 0.39
ACTB-209ENST00000473257 TMEM94Q12767 1356 aa17.45■□□□□ 0.38
ACTB-209ENST00000473257 NOS1P29475 1434 aa17.45■□□□□ 0.38
ACTB-209ENST00000473257 BCANQ96GW7 911 aa17.43■□□□□ 0.38
ACTB-209ENST00000473257 ADGRL2O95490 1459 aa17.43■□□□□ 0.38
ACTB-209ENST00000473257 PROSER2Q86WR7 435 aaPredicted RBP17.42■□□□□ 0.38
ACTB-209ENST00000473257 TET3O43151 1660 aa17.42■□□□□ 0.38
ACTB-209ENST00000473257 ADGRB3O60242 1522 aa17.42■□□□□ 0.38
ACTB-209ENST00000473257 ANKRD50Q9ULJ7 1429 aa17.41■□□□□ 0.38
ACTB-209ENST00000473257 KCNA6P17658 529 aa17.41■□□□□ 0.38
ACTB-209ENST00000473257 NUTM2DQ5VT03 806 aaPredicted RBP17.4■□□□□ 0.38
ACTB-209ENST00000473257 PPARGC1BQ86YN6 1023 aaKnown RBP17.4■□□□□ 0.38
ACTB-209ENST00000473257 RGS17Q9UGC6 210 aaPredicted RBP17.4■□□□□ 0.38
ACTB-209ENST00000473257 MYO5BQ9ULV0 1848 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms