RNA–Protein interactions for RNA: ENST00000472991.5

SMC4-214, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-214ENST00000472991 CAMSAP2Q08AD1 1489 aa14.13□□□□□ -0.15
SMC4-214ENST00000472991 CFDP1Q9UEE9 299 aaPredicted RBP14.13□□□□□ -0.15
SMC4-214ENST00000472991 ZNF777Q9ULD5 760 aaPredicted RBP14.13□□□□□ -0.15
SMC4-214ENST00000472991 PTPN23Q9H3S7 1636 aa14.12□□□□□ -0.15
SMC4-214ENST00000472991 ARHGEF12Q9NZN5 1544 aa14.12□□□□□ -0.15
SMC4-214ENST00000472991 POGZQ7Z3K3 1410 aa14.12□□□□□ -0.15
SMC4-214ENST00000472991 ZMYM4Q5VZL5 1548 aa14.11□□□□□ -0.15
SMC4-214ENST00000472991 KDM5CP41229 1560 aa14.11□□□□□ -0.15
SMC4-214ENST00000472991 PPARGC1BQ86YN6 1023 aaKnown RBP14.11□□□□□ -0.15
SMC4-214ENST00000472991 PLEKHH2Q8IVE3 1493 aa14.11□□□□□ -0.15
SMC4-214ENST00000472991 TSPYL2Q9H2G4 693 aaPredicted RBP14.1□□□□□ -0.15
SMC4-214ENST00000472991 ZNF518AQ6AHZ1 1483 aa14.1□□□□□ -0.15
SMC4-214ENST00000472991 HECW2Q9P2P5 1572 aa14.09□□□□□ -0.15
SMC4-214ENST00000472991 MIA2Q96PC5 1412 aa14.09□□□□□ -0.15
SMC4-214ENST00000472991 RAPGEF3O95398 923 aa14.09□□□□□ -0.15
SMC4-214ENST00000472991 DCBLD2Q96PD2 775 aa14.09□□□□□ -0.15
SMC4-214ENST00000472991 FGD6Q6ZV73 1430 aa14.08□□□□□ -0.15
SMC4-214ENST00000472991 CROCC2H7BZ55 1655 aa14.08□□□□□ -0.16
SMC4-214ENST00000472991 ARHGEF40Q8TER5 1519 aa14.08□□□□□ -0.16
SMC4-214ENST00000472991 ZNF644Q9H582 1327 aaPredicted RBP14.08□□□□□ -0.16
SMC4-214ENST00000472991 KIAA1107Q9UPP5 1409 aa14.07□□□□□ -0.16
SMC4-214ENST00000472991 TRAPPC8Q9Y2L5 1435 aa14.07□□□□□ -0.16
SMC4-214ENST00000472991 KIDINS220Q9ULH0 1771 aa14.07□□□□□ -0.16
SMC4-214ENST00000472991 CCDC61Q9Y6R9 512 aa14.07□□□□□ -0.16
SMC4-214ENST00000472991 ARHGEF5Q12774 1597 aa14.07□□□□□ -0.16
SMC4-214ENST00000472991 ZFYVE16Q7Z3T8 1539 aa14.06□□□□□ -0.16
SMC4-214ENST00000472991 INO80Q9ULG1 1556 aaPredicted RBP14.06□□□□□ -0.16
SMC4-214ENST00000472991 RASEFQ8IZ41 740 aa14.06□□□□□ -0.16
SMC4-214ENST00000472991 ABCA6Q8N139 1617 aa14.05□□□□□ -0.16
SMC4-214ENST00000472991 FBXO3Q9UK99 471 aa14.05□□□□□ -0.16
SMC4-214ENST00000472991 TCOF1Q13428 1488 aaKnown RBP14.05□□□□□ -0.16
SMC4-214ENST00000472991 MBD5Q9P267 1494 aa14.05□□□□□ -0.16
SMC4-214ENST00000472991 DNMT1P26358 1616 aaKnown RBP14.04□□□□□ -0.16
SMC4-214ENST00000472991 HNRNPMP52272 730 aaKnown RBP eCLIP14.04□□□□□ -0.162e-9■□□□□ 8.7
SMC4-214ENST00000472991 ZBTB47Q9UFB7 747 aaPredicted RBP14.04□□□□□ -0.16
SMC4-214ENST00000472991 CCDC141Q6ZP82 1450 aa14.03□□□□□ -0.16
SMC4-214ENST00000472991 ATP7AQ04656 1500 aa14.03□□□□□ -0.16
SMC4-214ENST00000472991 DIP2CQ9Y2E4 1556 aa14.03□□□□□ -0.16
SMC4-214ENST00000472991 SIGLEC1Q9BZZ2 1709 aa14.02□□□□□ -0.16
SMC4-214ENST00000472991 ADGBQ8N7X0 1667 aa14.02□□□□□ -0.16
SMC4-214ENST00000472991 MAGI2Q86UL8 1455 aa14.02□□□□□ -0.16
SMC4-214ENST00000472991 YEATS2Q9ULM3 1422 aa14.02□□□□□ -0.16
SMC4-214ENST00000472991 AFAP1Q8N556 730 aa14.02□□□□□ -0.17
SMC4-214ENST00000472991 MLH3Q9UHC1 1453 aa14.01□□□□□ -0.17
SMC4-214ENST00000472991 MS4A3Q96HJ5 214 aa14□□□□□ -0.17
SMC4-214ENST00000472991 MAST1Q9Y2H9 1570 aa14□□□□□ -0.17
SMC4-214ENST00000472991 NUBP1P53384 320 aa13.99□□□□□ -0.17
SMC4-214ENST00000472991 LHX8Q68G74 356 aa13.99□□□□□ -0.17
SMC4-214ENST00000472991 SPAG9O60271 1321 aaKnown RBP13.97□□□□□ -0.17
SMC4-214ENST00000472991 MYT1LQ9UL68 1186 aa13.97□□□□□ -0.17
SMC4-214ENST00000472991 PLXNC1O60486 1568 aa13.96□□□□□ -0.17
SMC4-214ENST00000472991 KIF12Q96FN5 646 aa13.96□□□□□ -0.17
SMC4-214ENST00000472991 DAPK1P53355 1430 aa13.96□□□□□ -0.18
SMC4-214ENST00000472991 REREQ9P2R6 1566 aa13.96□□□□□ -0.18
SMC4-214ENST00000472991 ATP10AO60312 1499 aa13.95□□□□□ -0.18
SMC4-214ENST00000472991 SHANK2Q9UPX8 1470 aa13.95□□□□□ -0.18
SMC4-214ENST00000472991 FAM50AQ14320 339 aaKnown RBP13.95□□□□□ -0.18
SMC4-214ENST00000472991 ABCC5O15440 1437 aa13.95□□□□□ -0.18
SMC4-214ENST00000472991 C9orf84Q5VXU9 1444 aa13.95□□□□□ -0.18
SMC4-214ENST00000472991 RRBP1Q9P2E9 1410 aaKnown RBP13.95□□□□□ -0.18
SMC4-214ENST00000472991 RTEL1-TNFRSF6BF6WH68 1400 aa13.94□□□□□ -0.18
SMC4-214ENST00000472991 BCORL1Q5H9F3 1711 aa13.94□□□□□ -0.18
SMC4-214ENST00000472991 RSPH4AQ5TD94 716 aa13.93□□□□□ -0.18
SMC4-214ENST00000472991 VASPP50552 380 aaPredicted RBP13.91□□□□□ -0.18
SMC4-214ENST00000472991 FER1L4A9Z1Z3 1794 aa13.91□□□□□ -0.18
SMC4-214ENST00000472991 TSPY4P0CV99 314 aa13.9□□□□□ -0.18
SMC4-214ENST00000472991 TSPY10P0CW01 314 aa13.9□□□□□ -0.18
SMC4-214ENST00000472991 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.9□□□□□ -0.183e-9■■■■■ 72.1
SMC4-214ENST00000472991 A2MP01023 1474 aa13.9□□□□□ -0.18
SMC4-214ENST00000472991 ADAMTSL3P82987 1691 aa13.89□□□□□ -0.19
SMC4-214ENST00000472991 AGLP35573 1532 aa13.89□□□□□ -0.19
SMC4-214ENST00000472991 ADGRL2O95490 1459 aa13.88□□□□□ -0.19
SMC4-214ENST00000472991 MAP3K13O43283 966 aa13.88□□□□□ -0.19
SMC4-214ENST00000472991 ASTLQ6HA08 431 aaPredicted RBP13.88□□□□□ -0.19
SMC4-214ENST00000472991 MADDQ8WXG6 1647 aa13.88□□□□□ -0.19
SMC4-214ENST00000472991 EIF2AK4Q9P2K8 1649 aaKnown RBP13.87□□□□□ -0.19
SMC4-214ENST00000472991 PELP1Q8IZL8 1130 aaKnown RBP13.87□□□□□ -0.19
SMC4-214ENST00000472991 RIMS1Q86UR5 1692 aaKnown RBP13.87□□□□□ -0.19
SMC4-214ENST00000472991 PTPRKQ15262 1439 aa13.87□□□□□ -0.19
SMC4-214ENST00000472991 ARID4BQ4LE39 1312 aaPredicted RBP13.87□□□□□ -0.19
SMC4-214ENST00000472991 DUOX2Q9NRD8 1548 aa13.86□□□□□ -0.19
SMC4-214ENST00000472991 CHIC2Q9UKJ5 165 aa13.86□□□□□ -0.19
SMC4-214ENST00000472991 ATMINO43313 823 aaPredicted RBP13.85□□□□□ -0.19
SMC4-214ENST00000472991 ITGAEP38570 1179 aa13.85□□□□□ -0.19
SMC4-214ENST00000472991 FAM212AQ96EL1 285 aa13.85□□□□□ -0.19
SMC4-214ENST00000472991 GCC2Q8IWJ2 1684 aa13.85□□□□□ -0.19
SMC4-214ENST00000472991 KIF15Q9NS87 1388 aa13.84□□□□□ -0.19
SMC4-214ENST00000472991 RNF17Q9BXT8 1623 aaKnown RBP13.84□□□□□ -0.19
SMC4-214ENST00000472991 ANKRD30AQ9BXX3 1397 aa13.83□□□□□ -0.19
SMC4-214ENST00000472991 DHX29Q7Z478 1369 aaKnown RBP13.83□□□□□ -0.2
SMC4-214ENST00000472991 NCOA1Q15788 1441 aa13.82□□□□□ -0.2
SMC4-214ENST00000472991 TRPC6Q9Y210 931 aa13.82□□□□□ -0.2
SMC4-214ENST00000472991 CLTCQ00610 1675 aaKnown RBP13.82□□□□□ -0.2
SMC4-214ENST00000472991 MLECQ14165 292 aa13.81□□□□□ -0.2
SMC4-214ENST00000472991 DEPDC5O75140 1603 aa13.81□□□□□ -0.2
SMC4-214ENST00000472991 CEP152O94986 1710 aa13.81□□□□□ -0.2
SMC4-214ENST00000472991 MROH1Q8NDA8 1641 aa13.8□□□□□ -0.2
SMC4-214ENST00000472991 RRP7BPQ9NSQ0 103 aa13.8□□□□□ -0.2
SMC4-214ENST00000472991 ERBINQ96RT1 1412 aa13.8□□□□□ -0.2
SMC4-214ENST00000472991 MROH2AA6NES4 1674 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms