RNA–Protein interactions for RNA: ENST00000472638.1

UBQLN4-203, Transcript of ubiquilin 4, humanhuman

TSL 5

Gene UBQLN4, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-203ENST00000472638 CHIC2Q9UKJ5 165 aa30.73■■■□□ 2.51
UBQLN4-203ENST00000472638 SHANK2Q9UPX8 1470 aa30.73■■■□□ 2.51
UBQLN4-203ENST00000472638 DNMT1P26358 1616 aaKnown RBP30.73■■■□□ 2.51
UBQLN4-203ENST00000472638 CROCC2H7BZ55 1655 aa30.72■■■□□ 2.51
UBQLN4-203ENST00000472638 KDM5DQ9BY66 1539 aa30.72■■■□□ 2.51
UBQLN4-203ENST00000472638 KIF15Q9NS87 1388 aa30.71■■■□□ 2.51
UBQLN4-203ENST00000472638 DUOX2Q9NRD8 1548 aa30.69■■■□□ 2.5
UBQLN4-203ENST00000472638 FBXO31Q5XUX0 539 aaPredicted RBP30.68■■■□□ 2.5
UBQLN4-203ENST00000472638 ILDR1Q86SU0 546 aaPredicted RBP30.66■■■□□ 2.5
UBQLN4-203ENST00000472638 FAM135AQ9P2D6 1515 aa30.65■■■□□ 2.5
UBQLN4-203ENST00000472638 RNF17Q9BXT8 1623 aaKnown RBP30.65■■■□□ 2.5
UBQLN4-203ENST00000472638 EIF2AK4Q9P2K8 1649 aaKnown RBP30.65■■■□□ 2.5
UBQLN4-203ENST00000472638 MYO3AQ8NEV4 1616 aa30.63■■■□□ 2.49
UBQLN4-203ENST00000472638 STRCQ7RTU9 1775 aa30.62■■■□□ 2.49
UBQLN4-203ENST00000472638 ANKRD30AQ9BXX3 1397 aa30.62■■■□□ 2.49
UBQLN4-203ENST00000472638 PZPP20742 1482 aa30.61■■■□□ 2.49
UBQLN4-203ENST00000472638 MROH1Q8NDA8 1641 aa30.59■■■□□ 2.49
UBQLN4-203ENST00000472638 ABCC3O15438 1527 aa30.59■■■□□ 2.49
UBQLN4-203ENST00000472638 ERBINQ96RT1 1412 aa30.59■■■□□ 2.49
UBQLN4-203ENST00000472638 TNRQ92752 1358 aa30.59■■■□□ 2.49
UBQLN4-203ENST00000472638 DMRT2Q9Y5R5 561 aa30.59■■■□□ 2.49
UBQLN4-203ENST00000472638 CAMSAP1Q5T5Y3 1602 aa30.58■■■□□ 2.49
UBQLN4-203ENST00000472638 NCOA1Q15788 1441 aa30.57■■■□□ 2.48
UBQLN4-203ENST00000472638 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.57■■■□□ 2.48
UBQLN4-203ENST00000472638 CEP170BQ9Y4F5 1589 aaPredicted RBP30.57■■■□□ 2.48
UBQLN4-203ENST00000472638 ZNF142P52746 1687 aaPredicted RBP30.54■■■□□ 2.48
UBQLN4-203ENST00000472638 NCKAP5LQ9HCH0 1330 aa30.52■■■□□ 2.48
UBQLN4-203ENST00000472638 ZC3H13Q5T200 1668 aaKnown RBP30.52■■■□□ 2.48
UBQLN4-203ENST00000472638 A2ML1A8K2U0 1454 aa30.51■■■□□ 2.48
UBQLN4-203ENST00000472638 ADGRL2O95490 1459 aa30.5■■■□□ 2.47
UBQLN4-203ENST00000472638 CEP152O94986 1710 aa30.5■■■□□ 2.47
UBQLN4-203ENST00000472638 PTPRTO14522 1441 aa30.48■■■□□ 2.47
UBQLN4-203ENST00000472638 PRDM15P57071 1507 aaPredicted RBP30.47■■■□□ 2.47
UBQLN4-203ENST00000472638 ITGAEP38570 1179 aa30.46■■■□□ 2.47
UBQLN4-203ENST00000472638 KANK1Q14678 1352 aa30.44■■■□□ 2.46
UBQLN4-203ENST00000472638 CERKQ8TCT0 537 aa30.43■■■□□ 2.46
UBQLN4-203ENST00000472638 FBXO41Q8TF61 875 aa30.43■■■□□ 2.46
UBQLN4-203ENST00000472638 ERVK-7P63135 1459 aa30.43■■■□□ 2.46
UBQLN4-203ENST00000472638 PLA2R1Q13018 1463 aa30.43■■■□□ 2.46
UBQLN4-203ENST00000472638 DEPDC5O75140 1603 aa30.42■■■□□ 2.46
UBQLN4-203ENST00000472638 PKD2Q13563 968 aa30.41■■■□□ 2.46
UBQLN4-203ENST00000472638 SPATA31D1Q6ZQQ2 1576 aa30.41■■■□□ 2.46
UBQLN4-203ENST00000472638 NLRP1Q9C000 1473 aa30.4■■■□□ 2.46
UBQLN4-203ENST00000472638 ANKRD50Q9ULJ7 1429 aa30.39■■■□□ 2.46
UBQLN4-203ENST00000472638 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.36■■■□□ 2.455e-7■■■□□ 14.8
UBQLN4-203ENST00000472638 ARHGAP31Q2M1Z3 1444 aa30.36■■■□□ 2.45
UBQLN4-203ENST00000472638 THEMISQ8N1K5 641 aaPredicted RBP30.35■■■□□ 2.45
UBQLN4-203ENST00000472638 UGGT1Q9NYU2 1555 aa30.35■■■□□ 2.45
UBQLN4-203ENST00000472638 CFAP65Q6ZU64 1925 aaKnown RBP30.34■■■□□ 2.45
UBQLN4-203ENST00000472638 VWDEQ8N2E2 1590 aa30.32■■■□□ 2.45
UBQLN4-203ENST00000472638 ROCK1Q13464 1354 aa30.31■■■□□ 2.44
UBQLN4-203ENST00000472638 LMTK2Q8IWU2 1503 aa30.31■■■□□ 2.44
UBQLN4-203ENST00000472638 ANKLE2Q86XL3 938 aa30.28■■■□□ 2.44
UBQLN4-203ENST00000472638 ZNF335Q9H4Z2 1342 aaPredicted RBP30.26■■■□□ 2.44
UBQLN4-203ENST00000472638 LTBP4Q8N2S1 1624 aa30.25■■■□□ 2.43
UBQLN4-203ENST00000472638 RRBP1Q9P2E9 1410 aaKnown RBP30.24■■■□□ 2.43
UBQLN4-203ENST00000472638 NEURL4Q96JN8 1562 aa30.23■■■□□ 2.43
UBQLN4-203ENST00000472638 EFCAB6Q5THR3 1501 aa30.22■■■□□ 2.43
UBQLN4-203ENST00000472638 POLR1AO95602 1720 aaPredicted RBP30.22■■■□□ 2.43
UBQLN4-203ENST00000472638 UNC13BO14795 1591 aa30.18■■■□□ 2.42
UBQLN4-203ENST00000472638 UBR1Q8IWV7 1749 aa30.18■■■□□ 2.42
UBQLN4-203ENST00000472638 STAG3Q9UJ98 1225 aa30.17■■■□□ 2.42
UBQLN4-203ENST00000472638 NPHP4O75161 1426 aaPredicted RBP30.16■■■□□ 2.42
UBQLN4-203ENST00000472638 IDI1Q13907 227 aa30.16■■■□□ 2.42
UBQLN4-203ENST00000472638 SYNMO15061 1565 aa30.15■■■□□ 2.42
UBQLN4-203ENST00000472638 PIK3C2BO00750 1634 aa30.14■■■□□ 2.42
UBQLN4-203ENST00000472638 NOS1P29475 1434 aa30.14■■■□□ 2.42
UBQLN4-203ENST00000472638 TET3O43151 1660 aa30.12■■■□□ 2.41
UBQLN4-203ENST00000472638 NUP155O75694 1391 aa30.12■■■□□ 2.41
UBQLN4-203ENST00000472638 MED14O60244 1454 aa30.12■■■□□ 2.41
UBQLN4-203ENST00000472638 TXNDC2Q86VQ3 553 aa30.1■■■□□ 2.41
UBQLN4-203ENST00000472638 LTKP29376 864 aa30.09■■■□□ 2.41
UBQLN4-203ENST00000472638 RPRD2Q5VT52 1461 aaKnown RBP30.09■■■□□ 2.41
UBQLN4-203ENST00000472638 SCAF11Q99590 1463 aaKnown RBP30.07■■■□□ 2.4
UBQLN4-203ENST00000472638 ARHGAP23Q9P227 1491 aa30.07■■■□□ 2.4
UBQLN4-203ENST00000472638 SLC52A1Q9NWF4 448 aa30.06■■■□□ 2.4
UBQLN4-203ENST00000472638 SLIT1O75093 1534 aa30.06■■■□□ 2.4
UBQLN4-203ENST00000472638 IQGAP1P46940 1657 aa30.05■■■□□ 2.4
UBQLN4-203ENST00000472638 GCC2Q8IWJ2 1684 aa30.05■■■□□ 2.4
UBQLN4-203ENST00000472638 IQGAP3Q86VI3 1631 aa30.05■■■□□ 2.4
UBQLN4-203ENST00000472638 EID1Q9Y6B2 187 aa30.05■■■□□ 2.4
UBQLN4-203ENST00000472638 TMEM2Q9UHN6 1383 aa30.04■■■□□ 2.4
UBQLN4-203ENST00000472638 IQSEC2Q5JU85 1478 aa30.02■■■□□ 2.4
UBQLN4-203ENST00000472638 NAIPQ13075 1403 aa30.01■■■□□ 2.39
UBQLN4-203ENST00000472638 E9PCH4 1651 aa30.01■■■□□ 2.39
UBQLN4-203ENST00000472638 ADGRB3O60242 1522 aa30■■■□□ 2.39
UBQLN4-203ENST00000472638 KDM5AP29375 1690 aaKnown RBP29.96■■■□□ 2.39
UBQLN4-203ENST00000472638 CHGAP10645 457 aaKnown RBP29.96■■■□□ 2.39
UBQLN4-203ENST00000472638 CPS1P31327 1500 aa29.96■■■□□ 2.39
UBQLN4-203ENST00000472638 UBAP1LF5GYI3 381 aa29.95■■■□□ 2.39
UBQLN4-203ENST00000472638 SENP3Q9H4L4 574 aaPredicted RBP29.92■■■□□ 2.38
UBQLN4-203ENST00000472638 HFM1A2PYH4 1435 aa29.91■■■□□ 2.38
UBQLN4-203ENST00000472638 TRIM52Q96A61 297 aa29.9■■■□□ 2.38
UBQLN4-203ENST00000472638 BCANQ96GW7 911 aa29.88■■■□□ 2.37
UBQLN4-203ENST00000472638 TMEM131LA2VDJ0 1609 aa29.87■■■□□ 2.37
UBQLN4-203ENST00000472638 SLC26A8Q96RN1 970 aa29.86■■■□□ 2.37
UBQLN4-203ENST00000472638 RIMS2Q9UQ26 1411 aa29.86■■■□□ 2.37
UBQLN4-203ENST00000472638 STRCP1A6NGW2 1772 aa29.85■■■□□ 2.37
UBQLN4-203ENST00000472638 MYO5BQ9ULV0 1848 aa29.85■■■□□ 2.37
UBQLN4-203ENST00000472638 PPP1R15AO75807 674 aaPredicted RBP29.84■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms