RNA–Protein interactions for RNA: ENST00000472558.6

IFFO1-208, Transcript of intermediate filament family orphan 1, humanhuman

TSL 2

Gene IFFO1, Length 2,571 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFFO1-208ENST00000472558 KIF15Q9NS87 1388 aa18.49■□□□□ 0.55
IFFO1-208ENST00000472558 MYBBP1AQ9BQG0 1328 aaKnown RBP18.49■□□□□ 0.55
IFFO1-208ENST00000472558 PLB1Q6P1J6 1458 aa18.49■□□□□ 0.55
IFFO1-208ENST00000472558 PRG4Q92954 1404 aaPredicted RBP18.49■□□□□ 0.55
IFFO1-208ENST00000472558 ERCC6L2Q5T890 1561 aa18.47■□□□□ 0.55
IFFO1-208ENST00000472558 KIF14Q15058 1648 aa18.47■□□□□ 0.55
IFFO1-208ENST00000472558 DNMT1P26358 1616 aaKnown RBP18.46■□□□□ 0.55
IFFO1-208ENST00000472558 CRBNQ96SW2 442 aa18.46■□□□□ 0.55
IFFO1-208ENST00000472558 ROCK2O75116 1388 aaKnown RBP18.46■□□□□ 0.55
IFFO1-208ENST00000472558 DDRGK1Q96HY6 314 aa18.45■□□□□ 0.54
IFFO1-208ENST00000472558 ST20-MTHFSA0A0A6YYL1 179 aa18.43■□□□□ 0.54
IFFO1-208ENST00000472558 EIF5BO60841 1220 aaKnown RBP18.42■□□□□ 0.54
IFFO1-208ENST00000472558 RALBP1Q15311 655 aa18.42■□□□□ 0.54
IFFO1-208ENST00000472558 C20orf194Q5TEA3 1177 aa18.41■□□□□ 0.54
IFFO1-208ENST00000472558 CARD11Q9BXL7 1154 aa18.41■□□□□ 0.54
IFFO1-208ENST00000472558 CARMIL2Q6F5E8 1435 aa18.41■□□□□ 0.54
IFFO1-208ENST00000472558 PDE3BQ13370 1112 aa18.4■□□□□ 0.54
IFFO1-208ENST00000472558 KIAA1107Q9UPP5 1409 aa18.4■□□□□ 0.54
IFFO1-208ENST00000472558 PKD2Q13563 968 aa18.39■□□□□ 0.54
IFFO1-208ENST00000472558 NUP153P49790 1475 aaKnown RBP18.39■□□□□ 0.53
IFFO1-208ENST00000472558 RALGAPBQ86X10 1494 aa18.39■□□□□ 0.53
IFFO1-208ENST00000472558 E9PCH4 1651 aa18.39■□□□□ 0.53
IFFO1-208ENST00000472558 FRAT2O75474 233 aaPredicted RBP18.38■□□□□ 0.53
IFFO1-208ENST00000472558 DCAF11Q8TEB1 546 aa18.38■□□□□ 0.53
IFFO1-208ENST00000472558 KDM2BQ8NHM5 1336 aa18.37■□□□□ 0.53
IFFO1-208ENST00000472558 UHRF1BP1Q6BDS2 1440 aa18.37■□□□□ 0.53
IFFO1-208ENST00000472558 KTN1Q86UP2 1357 aaKnown RBP18.37■□□□□ 0.53
IFFO1-208ENST00000472558 NLRP13Q86W25 1043 aa18.37■□□□□ 0.53
IFFO1-208ENST00000472558 PARD3Q8TEW0 1356 aa18.36■□□□□ 0.53
IFFO1-208ENST00000472558 C8orf34Q49A92 452 aa18.36■□□□□ 0.53
IFFO1-208ENST00000472558 PTPRGP23470 1445 aa18.35■□□□□ 0.53
IFFO1-208ENST00000472558 KDM2AQ9Y2K7 1162 aa18.34■□□□□ 0.53
IFFO1-208ENST00000472558 RAPGEF6Q8TEU7 1601 aa18.34■□□□□ 0.53
IFFO1-208ENST00000472558 PER1O15534 1290 aaPredicted RBP18.32■□□□□ 0.52
IFFO1-208ENST00000472558 FAM161AQ3B820 660 aa18.29■□□□□ 0.52
IFFO1-208ENST00000472558 BLMP54132 1417 aaPredicted RBP18.27■□□□□ 0.52
IFFO1-208ENST00000472558 FAM43AQ8N2R8 423 aa18.27■□□□□ 0.52
IFFO1-208ENST00000472558 CLASP1Q7Z460 1538 aa18.27■□□□□ 0.52
IFFO1-208ENST00000472558 CC2D1BQ5T0F9 858 aaKnown RBP18.27■□□□□ 0.51
IFFO1-208ENST00000472558 OSCARQ8IYS5 282 aa18.26■□□□□ 0.51
IFFO1-208ENST00000472558 CENPQQ7L2Z9 268 aaPredicted RBP18.26■□□□□ 0.51
IFFO1-208ENST00000472558 CAMSAP2Q08AD1 1489 aa18.25■□□□□ 0.51
IFFO1-208ENST00000472558 SHROOM2Q13796 1616 aa18.24■□□□□ 0.51
IFFO1-208ENST00000472558 RGS3P49796 1198 aa18.23■□□□□ 0.51
IFFO1-208ENST00000472558 ZNF777Q9ULD5 760 aaPredicted RBP18.23■□□□□ 0.51
IFFO1-208ENST00000472558 ATP10BO94823 1461 aa18.23■□□□□ 0.51
IFFO1-208ENST00000472558 ARHGEF12Q9NZN5 1544 aa18.23■□□□□ 0.51
IFFO1-208ENST00000472558 ADGBQ8N7X0 1667 aa18.23■□□□□ 0.51
IFFO1-208ENST00000472558 RSPH6AQ9H0K4 717 aa18.23■□□□□ 0.51
IFFO1-208ENST00000472558 ABCA8O94911 1581 aa18.22■□□□□ 0.51
IFFO1-208ENST00000472558 POGKQ9P215 609 aa18.22■□□□□ 0.51
IFFO1-208ENST00000472558 ZMYM4Q5VZL5 1548 aa18.21■□□□□ 0.51
IFFO1-208ENST00000472558 CFDP1Q9UEE9 299 aaPredicted RBP18.21■□□□□ 0.51
IFFO1-208ENST00000472558 ADGRL2O95490 1459 aa18.21■□□□□ 0.51
IFFO1-208ENST00000472558 ANKRD50Q9ULJ7 1429 aa18.2■□□□□ 0.5
IFFO1-208ENST00000472558 NUP155O75694 1391 aa18.2■□□□□ 0.5
IFFO1-208ENST00000472558 DUSP27Q5VZP5 1158 aa18.19■□□□□ 0.5
IFFO1-208ENST00000472558 RRAGDQ9NQL2 400 aaPredicted RBP18.19■□□□□ 0.5
IFFO1-208ENST00000472558 ADAMTS8Q9UP79 889 aa18.19■□□□□ 0.5
IFFO1-208ENST00000472558 USP19O94966 1318 aa18.19■□□□□ 0.5
IFFO1-208ENST00000472558 PLEKHD1A6NEE1 506 aa18.18■□□□□ 0.5
IFFO1-208ENST00000472558 NBPF1Q3BBV0 1214 aa18.18■□□□□ 0.5
IFFO1-208ENST00000472558 PLEKHH1Q9ULM0 1364 aa18.18■□□□□ 0.5
IFFO1-208ENST00000472558 INSRP06213 1382 aa18.16■□□□□ 0.5
IFFO1-208ENST00000472558 GPATCH8Q9UKJ3 1502 aaKnown RBP18.16■□□□□ 0.5
IFFO1-208ENST00000472558 CROCC2H7BZ55 1655 aa18.16■□□□□ 0.5
IFFO1-208ENST00000472558 DISP3Q9P2K9 1392 aa18.15■□□□□ 0.5
IFFO1-208ENST00000472558 PANK3Q9H999 370 aa18.15■□□□□ 0.5
IFFO1-208ENST00000472558 ANKRD30AQ9BXX3 1397 aa18.15■□□□□ 0.5
IFFO1-208ENST00000472558 PLEKHH2Q8IVE3 1493 aa18.14■□□□□ 0.49
IFFO1-208ENST00000472558 TROQ12816 1431 aaPredicted RBP18.14■□□□□ 0.49
IFFO1-208ENST00000472558 SEC24BO95487 1268 aa18.14■□□□□ 0.49
IFFO1-208ENST00000472558 TRPM1Q7Z4N2 1603 aa18.12■□□□□ 0.49
IFFO1-208ENST00000472558 TESK2Q96S53 571 aa18.12■□□□□ 0.49
IFFO1-208ENST00000472558 KDM5DQ9BY66 1539 aa18.12■□□□□ 0.49
IFFO1-208ENST00000472558 ZNF521Q96K83 1311 aa18.11■□□□□ 0.49
IFFO1-208ENST00000472558 COL17A1Q9UMD9 1497 aaPredicted RBP18.1■□□□□ 0.49
IFFO1-208ENST00000472558 PRAG1Q86YV5 1406 aa18.1■□□□□ 0.49
IFFO1-208ENST00000472558 IGHDP01880 384 aa18.09■□□□□ 0.49
IFFO1-208ENST00000472558 SLKQ9H2G2 1235 aaPredicted RBP18.09■□□□□ 0.49
IFFO1-208ENST00000472558 ITSN2Q9NZM3 1697 aa18.08■□□□□ 0.49
IFFO1-208ENST00000472558 SPINK5Q9NQ38 1064 aaPredicted RBP18.08■□□□□ 0.48
IFFO1-208ENST00000472558 RGL3Q3MIN7 710 aa18.07■□□□□ 0.48
IFFO1-208ENST00000472558 GOLGA2Q08379 1002 aa18.06■□□□□ 0.48
IFFO1-208ENST00000472558 ABCC2Q92887 1545 aa18.06■□□□□ 0.48
IFFO1-208ENST00000472558 VIRMAQ69YN4 1812 aaKnown RBP18.06■□□□□ 0.48
IFFO1-208ENST00000472558 BCAR3O75815 825 aa18.05■□□□□ 0.48
IFFO1-208ENST00000472558 SLFN5Q08AF3 891 aa18.04■□□□□ 0.48
IFFO1-208ENST00000472558 ANTXR1Q9H6X2 564 aa18.04■□□□□ 0.48
IFFO1-208ENST00000472558 CYB5RLQ6IPT4 315 aa18.03■□□□□ 0.48
IFFO1-208ENST00000472558 ARXQ96QS3 562 aa18.03■□□□□ 0.48
IFFO1-208ENST00000472558 NLRP1Q9C000 1473 aa18.03■□□□□ 0.48
IFFO1-208ENST00000472558 C9orf84Q5VXU9 1444 aa18.03■□□□□ 0.48
IFFO1-208ENST00000472558 GPRASP1Q5JY77 1395 aa18.03■□□□□ 0.48
IFFO1-208ENST00000472558 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.03■□□□□ 0.48
IFFO1-208ENST00000472558 CDC42BPAQ5VT25 1732 aa18.03■□□□□ 0.48
IFFO1-208ENST00000472558 PPP2R1AP30153 589 aa18.02■□□□□ 0.48
IFFO1-208ENST00000472558 ERBINQ96RT1 1412 aa18.02■□□□□ 0.48
IFFO1-208ENST00000472558 HNRNPMP52272 730 aaKnown RBP eCLIP18.01■□□□□ 0.47
IFFO1-208ENST00000472558 TRMT2AQ8IZ69 625 aaKnown RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms