RNA–Protein interactions for RNA: ENST00000472027.1

SYN3-211, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-211ENST00000472027 CROCC2H7BZ55 1655 aa14.04□□□□□ -0.16
SYN3-211ENST00000472027 NCOA1Q15788 1441 aa14.04□□□□□ -0.16
SYN3-211ENST00000472027 MROH2AA6NES4 1674 aa14.04□□□□□ -0.16
SYN3-211ENST00000472027 UHRF1BP1Q6BDS2 1440 aa14.03□□□□□ -0.16
SYN3-211ENST00000472027 NPATQ14207 1427 aa14.02□□□□□ -0.16
SYN3-211ENST00000472027 PTPRKQ15262 1439 aa14.01□□□□□ -0.17
SYN3-211ENST00000472027 ERBINQ96RT1 1412 aa14.01□□□□□ -0.17
SYN3-211ENST00000472027 ITGAEP38570 1179 aa14.01□□□□□ -0.17
SYN3-211ENST00000472027 FBXO31Q5XUX0 539 aaPredicted RBP14.01□□□□□ -0.17
SYN3-211ENST00000472027 PREX1Q8TCU6 1659 aa14.01□□□□□ -0.17
SYN3-211ENST00000472027 KDM5DQ9BY66 1539 aa14□□□□□ -0.17
SYN3-211ENST00000472027 SETD1BQ9UPS6 1966 aaKnown RBP14□□□□□ -0.17
SYN3-211ENST00000472027 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14□□□□□ -0.17
SYN3-211ENST00000472027 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14□□□□□ -0.17
SYN3-211ENST00000472027 EIF2AK4Q9P2K8 1649 aaKnown RBP14□□□□□ -0.17
SYN3-211ENST00000472027 ADGRL2O95490 1459 aa13.99□□□□□ -0.17
SYN3-211ENST00000472027 FAM135AQ9P2D6 1515 aa13.99□□□□□ -0.17
SYN3-211ENST00000472027 RNF17Q9BXT8 1623 aaKnown RBP13.98□□□□□ -0.17
SYN3-211ENST00000472027 PZPP20742 1482 aa13.96□□□□□ -0.17
SYN3-211ENST00000472027 MROH1Q8NDA8 1641 aa13.96□□□□□ -0.17
SYN3-211ENST00000472027 ABCC3O15438 1527 aa13.95□□□□□ -0.18
SYN3-211ENST00000472027 RRBP1Q9P2E9 1410 aaKnown RBP13.95□□□□□ -0.18
SYN3-211ENST00000472027 ANKRD50Q9ULJ7 1429 aa13.95□□□□□ -0.18
SYN3-211ENST00000472027 ROCK1Q13464 1354 aa13.95□□□□□ -0.18
SYN3-211ENST00000472027 KANK1Q14678 1352 aa13.94□□□□□ -0.18
SYN3-211ENST00000472027 TNRQ92752 1358 aa13.94□□□□□ -0.18
SYN3-211ENST00000472027 PRDM15P57071 1507 aaPredicted RBP13.92□□□□□ -0.18
SYN3-211ENST00000472027 DMRT2Q9Y5R5 561 aa13.92□□□□□ -0.18
SYN3-211ENST00000472027 ZC3H13Q5T200 1668 aaKnown RBP13.91□□□□□ -0.18
SYN3-211ENST00000472027 DEPDC5O75140 1603 aa13.9□□□□□ -0.18
SYN3-211ENST00000472027 CEP152O94986 1710 aa13.9□□□□□ -0.18
SYN3-211ENST00000472027 MYO3AQ8NEV4 1616 aa13.9□□□□□ -0.19
SYN3-211ENST00000472027 ARHGAP31Q2M1Z3 1444 aa13.9□□□□□ -0.19
SYN3-211ENST00000472027 CEP170BQ9Y4F5 1589 aaPredicted RBP13.89□□□□□ -0.19
SYN3-211ENST00000472027 A2ML1A8K2U0 1454 aa13.89□□□□□ -0.19
SYN3-211ENST00000472027 CAMSAP1Q5T5Y3 1602 aa13.89□□□□□ -0.19
SYN3-211ENST00000472027 NCKAP5LQ9HCH0 1330 aa13.89□□□□□ -0.19
SYN3-211ENST00000472027 ERVK-7P63135 1459 aa13.88□□□□□ -0.19
SYN3-211ENST00000472027 STRCQ7RTU9 1775 aa13.88□□□□□ -0.19
SYN3-211ENST00000472027 VWDEQ8N2E2 1590 aa13.88□□□□□ -0.19
SYN3-211ENST00000472027 LMTK2Q8IWU2 1503 aa13.87□□□□□ -0.19
SYN3-211ENST00000472027 PKD2Q13563 968 aa13.87□□□□□ -0.19
SYN3-211ENST00000472027 THEMISQ8N1K5 641 aaPredicted RBP13.87□□□□□ -0.19
SYN3-211ENST00000472027 SPATA31D1Q6ZQQ2 1576 aa13.87□□□□□ -0.19
SYN3-211ENST00000472027 NLRP1Q9C000 1473 aa13.87□□□□□ -0.19
SYN3-211ENST00000472027 ZNF142P52746 1687 aaPredicted RBP13.85□□□□□ -0.19
SYN3-211ENST00000472027 PTPRTO14522 1441 aa13.85□□□□□ -0.19
SYN3-211ENST00000472027 PLA2R1Q13018 1463 aa13.85□□□□□ -0.19
SYN3-211ENST00000472027 UGGT1Q9NYU2 1555 aa13.83□□□□□ -0.2
SYN3-211ENST00000472027 NUP155O75694 1391 aa13.83□□□□□ -0.2
SYN3-211ENST00000472027 IDI1Q13907 227 aa13.82□□□□□ -0.2
SYN3-211ENST00000472027 ANKLE2Q86XL3 938 aa13.82□□□□□ -0.2
SYN3-211ENST00000472027 CFAP65Q6ZU64 1925 aaKnown RBP13.82□□□□□ -0.2
SYN3-211ENST00000472027 NAIPQ13075 1403 aa13.81□□□□□ -0.2
SYN3-211ENST00000472027 UNC13BO14795 1591 aa13.81□□□□□ -0.2
SYN3-211ENST00000472027 EFCAB6Q5THR3 1501 aa13.8□□□□□ -0.2
SYN3-211ENST00000472027 NOS1P29475 1434 aa13.8□□□□□ -0.2
SYN3-211ENST00000472027 SLC52A1Q9NWF4 448 aa13.79□□□□□ -0.2
SYN3-211ENST00000472027 STAG3Q9UJ98 1225 aa13.79□□□□□ -0.2
SYN3-211ENST00000472027 RPRD2Q5VT52 1461 aaKnown RBP13.79□□□□□ -0.2
SYN3-211ENST00000472027 ILDR1Q86SU0 546 aaPredicted RBP13.78□□□□□ -0.2
SYN3-211ENST00000472027 CERKQ8TCT0 537 aa13.78□□□□□ -0.2
SYN3-211ENST00000472027 HFM1A2PYH4 1435 aa13.78□□□□□ -0.2
SYN3-211ENST00000472027 TET3O43151 1660 aa13.76□□□□□ -0.21
SYN3-211ENST00000472027 TXNDC2Q86VQ3 553 aa13.76□□□□□ -0.21
SYN3-211ENST00000472027 TRIM52Q96A61 297 aa13.76□□□□□ -0.21
SYN3-211ENST00000472027 IQGAP3Q86VI3 1631 aa13.75□□□□□ -0.21
SYN3-211ENST00000472027 SYNMO15061 1565 aa13.75□□□□□ -0.21
SYN3-211ENST00000472027 ZNF335Q9H4Z2 1342 aaPredicted RBP13.74□□□□□ -0.21
SYN3-211ENST00000472027 UBR1Q8IWV7 1749 aa13.74□□□□□ -0.21
SYN3-211ENST00000472027 LTKP29376 864 aa13.74□□□□□ -0.21
SYN3-211ENST00000472027 EID1Q9Y6B2 187 aa13.74□□□□□ -0.21
SYN3-211ENST00000472027 PIK3C2BO00750 1634 aa13.74□□□□□ -0.21
SYN3-211ENST00000472027 GCC2Q8IWJ2 1684 aa13.73□□□□□ -0.21
SYN3-211ENST00000472027 FBXO41Q8TF61 875 aa13.73□□□□□ -0.21
SYN3-211ENST00000472027 NEURL4Q96JN8 1562 aa13.73□□□□□ -0.21
SYN3-211ENST00000472027 MED14O60244 1454 aa13.73□□□□□ -0.21
SYN3-211ENST00000472027 NPHP4O75161 1426 aaPredicted RBP13.73□□□□□ -0.21
SYN3-211ENST00000472027 TMEM2Q9UHN6 1383 aa13.72□□□□□ -0.21
SYN3-211ENST00000472027 ARHGAP23Q9P227 1491 aa13.72□□□□□ -0.21
SYN3-211ENST00000472027 E9PCH4 1651 aa13.72□□□□□ -0.21
SYN3-211ENST00000472027 SLIT1O75093 1534 aa13.71□□□□□ -0.21
SYN3-211ENST00000472027 CHGAP10645 457 aaKnown RBP13.71□□□□□ -0.21
SYN3-211ENST00000472027 LTBP4Q8N2S1 1624 aa13.71□□□□□ -0.22
SYN3-211ENST00000472027 POLR1AO95602 1720 aaPredicted RBP13.7□□□□□ -0.22
SYN3-211ENST00000472027 SCAF11Q99590 1463 aaKnown RBP13.7□□□□□ -0.22
SYN3-211ENST00000472027 SLC4A1APQ9BWU0 796 aaKnown RBP13.69□□□□□ -0.22
SYN3-211ENST00000472027 KDM5AP29375 1690 aaKnown RBP13.68□□□□□ -0.22
SYN3-211ENST00000472027 ADGRB3O60242 1522 aa13.68□□□□□ -0.22
SYN3-211ENST00000472027 HDGFP51858 240 aaKnown RBP13.67□□□□□ -0.22
SYN3-211ENST00000472027 SETD5Q9C0A6 1442 aa13.65□□□□□ -0.22
SYN3-211ENST00000472027 MPHOSPH9Q99550 1183 aa13.65□□□□□ -0.22
SYN3-211ENST00000472027 IQGAP1P46940 1657 aa13.65□□□□□ -0.22
SYN3-211ENST00000472027 TMEM131LA2VDJ0 1609 aa13.64□□□□□ -0.23
SYN3-211ENST00000472027 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.64□□□□□ -0.23
SYN3-211ENST00000472027 BCANQ96GW7 911 aa13.64□□□□□ -0.23
SYN3-211ENST00000472027 RIMS2Q9UQ26 1411 aa13.64□□□□□ -0.23
SYN3-211ENST00000472027 ACIN1Q9UKV3 1341 aaKnown RBP13.64□□□□□ -0.23
SYN3-211ENST00000472027 PPP1R15AO75807 674 aaPredicted RBP13.63□□□□□ -0.23
SYN3-211ENST00000472027 FOXD1Q16676 465 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms