RNA–Protein interactions for RNA: ENST00000471909.1

RRP1-202, Transcript of ribosomal RNA processing 1, humanhuman

TSL 1 (best)

Gene RRP1, Length 2,544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1-202ENST00000471909 FANCAO15360 1455 aa24.15■■□□□ 1.46
RRP1-202ENST00000471909 RTEL1-TNFRSF6BF6WH68 1400 aa24.14■■□□□ 1.45
RRP1-202ENST00000471909 CCDC144AA2RUR9 1427 aa24.14■■□□□ 1.45
RRP1-202ENST00000471909 KIF7Q2M1P5 1343 aa24.13■■□□□ 1.45
RRP1-202ENST00000471909 USP47Q96K76 1375 aa24.13■■□□□ 1.45
RRP1-202ENST00000471909 DCAF11Q8TEB1 546 aa24.13■■□□□ 1.45
RRP1-202ENST00000471909 RALGAPBQ86X10 1494 aa24.12■■□□□ 1.45
RRP1-202ENST00000471909 KDM2AQ9Y2K7 1162 aa24.12■■□□□ 1.45
RRP1-202ENST00000471909 ZFYVE16Q7Z3T8 1539 aa24.11■■□□□ 1.45
RRP1-202ENST00000471909 ANP32EQ9BTT0 268 aa24.1■■□□□ 1.45
RRP1-202ENST00000471909 KDM5CP41229 1560 aa24.08■■□□□ 1.45
RRP1-202ENST00000471909 POLR1AO95602 1720 aaPredicted RBP24.06■■□□□ 1.44
RRP1-202ENST00000471909 NPM1P06748 294 aaKnown RBP eCLIP24.06■■□□□ 1.44
RRP1-202ENST00000471909 ADGRL1O94910 1474 aa24.05■■□□□ 1.44
RRP1-202ENST00000471909 CARD11Q9BXL7 1154 aa24.05■■□□□ 1.44
RRP1-202ENST00000471909 SCAPERQ9BY12 1400 aa24.05■■□□□ 1.44
RRP1-202ENST00000471909 ATP10AO60312 1499 aa24.05■■□□□ 1.44
RRP1-202ENST00000471909 BCANQ96GW7 911 aa24.04■■□□□ 1.44
RRP1-202ENST00000471909 BCORL1Q5H9F3 1711 aa24.03■■□□□ 1.44
RRP1-202ENST00000471909 ATP7AQ04656 1500 aa24.03■■□□□ 1.44
RRP1-202ENST00000471909 FKBP8Q14318 412 aa24.03■■□□□ 1.44
RRP1-202ENST00000471909 RGL3Q3MIN7 710 aa24.03■■□□□ 1.44
RRP1-202ENST00000471909 INO80Q9ULG1 1556 aaPredicted RBP24.02■■□□□ 1.44
RRP1-202ENST00000471909 PRAG1Q86YV5 1406 aa24■■□□□ 1.43
RRP1-202ENST00000471909 A2MP01023 1474 aa23.99■■□□□ 1.43
RRP1-202ENST00000471909 PRKRIP1Q9H875 184 aaPredicted RBP23.99■■□□□ 1.43
RRP1-202ENST00000471909 ROCK2O75116 1388 aaKnown RBP23.97■■□□□ 1.43
RRP1-202ENST00000471909 ARID4BQ4LE39 1312 aaPredicted RBP23.96■■□□□ 1.43
RRP1-202ENST00000471909 DEPDC5O75140 1603 aa23.95■■□□□ 1.42
RRP1-202ENST00000471909 MYT1LQ9UL68 1186 aa23.95■■□□□ 1.42
RRP1-202ENST00000471909 ST20-MTHFSA0A0A6YYL1 179 aa23.94■■□□□ 1.42
RRP1-202ENST00000471909 NEFLP07196 543 aa23.94■■□□□ 1.42
RRP1-202ENST00000471909 DHX29Q7Z478 1369 aaKnown RBP23.93■■□□□ 1.42
RRP1-202ENST00000471909 E9PCH4 1651 aa23.93■■□□□ 1.42
RRP1-202ENST00000471909 TRPM1Q7Z4N2 1603 aa23.93■■□□□ 1.42
RRP1-202ENST00000471909 CD109Q6YHK3 1445 aa23.92■■□□□ 1.42
RRP1-202ENST00000471909 CCDC184Q52MB2 194 aa23.91■■□□□ 1.42
RRP1-202ENST00000471909 POLR3GLQ9BT43 218 aa23.91■■□□□ 1.42
RRP1-202ENST00000471909 KIF3BO15066 747 aa23.91■■□□□ 1.42
RRP1-202ENST00000471909 NBPF1Q3BBV0 1214 aa23.9■■□□□ 1.42
RRP1-202ENST00000471909 ZNF518AQ6AHZ1 1483 aa23.89■■□□□ 1.41
RRP1-202ENST00000471909 VWDEQ8N2E2 1590 aa23.89■■□□□ 1.41
RRP1-202ENST00000471909 GPRASP1Q5JY77 1395 aa23.88■■□□□ 1.41
RRP1-202ENST00000471909 PTPRTO14522 1441 aa23.88■■□□□ 1.41
RRP1-202ENST00000471909 KANK1Q14678 1352 aa23.87■■□□□ 1.41
RRP1-202ENST00000471909 KIDINS220Q9ULH0 1771 aa23.87■■□□□ 1.41
RRP1-202ENST00000471909 TRPM2O94759 1503 aa23.87■■□□□ 1.41
RRP1-202ENST00000471909 EIF2AK4Q9P2K8 1649 aaKnown RBP23.86■■□□□ 1.41
RRP1-202ENST00000471909 TET3O43151 1660 aa23.85■■□□□ 1.41
RRP1-202ENST00000471909 PRDM15P57071 1507 aaPredicted RBP23.84■■□□□ 1.41
RRP1-202ENST00000471909 MROH1Q8NDA8 1641 aa23.84■■□□□ 1.41
RRP1-202ENST00000471909 POGZQ7Z3K3 1410 aa23.82■■□□□ 1.4
RRP1-202ENST00000471909 CFAP74Q9C0B2 1584 aa23.82■■□□□ 1.4
RRP1-202ENST00000471909 HNRNPUQ00839 825 aaKnown RBP eCLIP23.82■■□□□ 1.4
RRP1-202ENST00000471909 SPHKAPQ2M3C7 1700 aa23.82■■□□□ 1.4
RRP1-202ENST00000471909 MRS2Q9HD23 443 aa23.81■■□□□ 1.4
RRP1-202ENST00000471909 LAMC1P11047 1609 aa23.8■■□□□ 1.4
RRP1-202ENST00000471909 CLTCL1P53675 1640 aa23.79■■□□□ 1.4
RRP1-202ENST00000471909 RBM19Q9Y4C8 960 aaKnown RBP23.78■■□□□ 1.4
RRP1-202ENST00000471909 MLH3Q9UHC1 1453 aa23.77■■□□□ 1.4
RRP1-202ENST00000471909 CEP152O94986 1710 aa23.76■■□□□ 1.39
RRP1-202ENST00000471909 FAM9BQ8IZU0 186 aa23.74■■□□□ 1.39
RRP1-202ENST00000471909 CNGB1Q14028 1251 aaPredicted RBP23.74■■□□□ 1.39
RRP1-202ENST00000471909 TESK2Q96S53 571 aa23.73■■□□□ 1.39
RRP1-202ENST00000471909 NEO1Q92859 1461 aa23.73■■□□□ 1.39
RRP1-202ENST00000471909 MADDQ8WXG6 1647 aa23.72■■□□□ 1.39
RRP1-202ENST00000471909 EFCAB6Q5THR3 1501 aa23.72■■□□□ 1.39
RRP1-202ENST00000471909 FRMPD1Q5SYB0 1578 aa23.72■■□□□ 1.39
RRP1-202ENST00000471909 HECW2Q9P2P5 1572 aa23.72■■□□□ 1.39
RRP1-202ENST00000471909 RNF17Q9BXT8 1623 aaKnown RBP23.72■■□□□ 1.39
RRP1-202ENST00000471909 CYB5RLQ6IPT4 315 aa23.71■■□□□ 1.39
RRP1-202ENST00000471909 STAC3Q96MF2 364 aa23.71■■□□□ 1.39
RRP1-202ENST00000471909 LMTK2Q8IWU2 1503 aa23.7■■□□□ 1.38
RRP1-202ENST00000471909 RAPGEF3O95398 923 aa23.69■■□□□ 1.38
RRP1-202ENST00000471909 PPRC1Q5VV67 1664 aaKnown RBP23.69■■□□□ 1.38
RRP1-202ENST00000471909 UGGT1Q9NYU2 1555 aa23.68■■□□□ 1.38
RRP1-202ENST00000471909 COL17A1Q9UMD9 1497 aaPredicted RBP23.68■■□□□ 1.38
RRP1-202ENST00000471909 DISP3Q9P2K9 1392 aa23.68■■□□□ 1.38
RRP1-202ENST00000471909 NEURL4Q96JN8 1562 aa23.66■■□□□ 1.38
RRP1-202ENST00000471909 ABCA6Q8N139 1617 aa23.66■■□□□ 1.38
RRP1-202ENST00000471909 GGT6Q6P531 493 aa23.64■■□□□ 1.38
RRP1-202ENST00000471909 MAP3K4Q9Y6R4 1608 aa23.62■■□□□ 1.37
RRP1-202ENST00000471909 TMF1P82094 1093 aa23.62■■□□□ 1.37
RRP1-202ENST00000471909 NPATQ14207 1427 aa23.6■■□□□ 1.37
RRP1-202ENST00000471909 BCL11AQ9H165 835 aa23.6■■□□□ 1.37
RRP1-202ENST00000471909 KTN1Q86UP2 1357 aaKnown RBP23.59■■□□□ 1.37
RRP1-202ENST00000471909 PER1O15534 1290 aaPredicted RBP23.59■■□□□ 1.37
RRP1-202ENST00000471909 RIMBP3CA6NJZ7 1639 aa23.59■■□□□ 1.37
RRP1-202ENST00000471909 RIMBP3BA6NNM3 1639 aa23.59■■□□□ 1.37
RRP1-202ENST00000471909 RIMBP3Q9UFD9 1639 aa23.59■■□□□ 1.37
RRP1-202ENST00000471909 IQGAP1P46940 1657 aa23.59■■□□□ 1.37
RRP1-202ENST00000471909 ZBED9Q6R2W3 1325 aa23.59■■□□□ 1.37
RRP1-202ENST00000471909 RALBP1Q15311 655 aa23.58■■□□□ 1.37
RRP1-202ENST00000471909 SCAF11Q99590 1463 aaKnown RBP23.58■■□□□ 1.37
RRP1-202ENST00000471909 WASHC2CQ9Y4E1 1318 aa23.57■■□□□ 1.36
RRP1-202ENST00000471909 MYOM2P54296 1465 aa23.57■■□□□ 1.36
RRP1-202ENST00000471909 GLI2P10070 1586 aa23.57■■□□□ 1.36
RRP1-202ENST00000471909 DIP2CQ9Y2E4 1556 aa23.57■■□□□ 1.36
RRP1-202ENST00000471909 ADGRF5Q8IZF2 1346 aa23.56■■□□□ 1.36
RRP1-202ENST00000471909 MYBBP1AQ9BQG0 1328 aaKnown RBP23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms