RNA–Protein interactions for RNA: ENST00000471515.5

CHKB-206, Transcript of choline kinase beta, humanhuman

TSL 3

Gene CHKB, Length 657 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-206ENST00000471515 GGT6Q6P531 493 aa13.91□□□□□ -0.18
CHKB-206ENST00000471515 DMRT2Q9Y5R5 561 aa13.91□□□□□ -0.18
CHKB-206ENST00000471515 KDM5DQ9BY66 1539 aa13.9□□□□□ -0.18
CHKB-206ENST00000471515 RNF17Q9BXT8 1623 aaKnown RBP13.9□□□□□ -0.19
CHKB-206ENST00000471515 PZPP20742 1482 aa13.89□□□□□ -0.19
CHKB-206ENST00000471515 MROH1Q8NDA8 1641 aa13.89□□□□□ -0.19
CHKB-206ENST00000471515 A2ML1A8K2U0 1454 aa13.87□□□□□ -0.19
CHKB-206ENST00000471515 DNMT1P26358 1616 aaKnown RBP13.86□□□□□ -0.19
CHKB-206ENST00000471515 KIF3BO15066 747 aa13.86□□□□□ -0.19
CHKB-206ENST00000471515 EIF2AK4Q9P2K8 1649 aaKnown RBP13.85□□□□□ -0.19
CHKB-206ENST00000471515 ABCC3O15438 1527 aa13.85□□□□□ -0.19
CHKB-206ENST00000471515 FBXO31Q5XUX0 539 aaPredicted RBP13.84□□□□□ -0.19
CHKB-206ENST00000471515 IQSEC2Q5JU85 1478 aa13.84□□□□□ -0.19
CHKB-206ENST00000471515 SHANK2Q9UPX8 1470 aa13.84□□□□□ -0.19
CHKB-206ENST00000471515 NEURL4Q96JN8 1562 aa13.83□□□□□ -0.19
CHKB-206ENST00000471515 ABCC5O15440 1437 aa13.83□□□□□ -0.2
CHKB-206ENST00000471515 NCKAP5LQ9HCH0 1330 aa13.83□□□□□ -0.2
CHKB-206ENST00000471515 TNRQ92752 1358 aa13.83□□□□□ -0.2
CHKB-206ENST00000471515 CROCC2H7BZ55 1655 aa13.82□□□□□ -0.2
CHKB-206ENST00000471515 SPATA31D1Q6ZQQ2 1576 aa13.81□□□□□ -0.2
CHKB-206ENST00000471515 TSPY4P0CV99 314 aa13.81□□□□□ -0.2
CHKB-206ENST00000471515 TSPY10P0CW01 314 aa13.81□□□□□ -0.2
CHKB-206ENST00000471515 PKD2Q13563 968 aa13.81□□□□□ -0.2
CHKB-206ENST00000471515 PTPN23Q9H3S7 1636 aa13.81□□□□□ -0.2
CHKB-206ENST00000471515 ZC3H13Q5T200 1668 aaKnown RBP13.81□□□□□ -0.2
CHKB-206ENST00000471515 DUOX2Q9NRD8 1548 aa13.8□□□□□ -0.2
CHKB-206ENST00000471515 WASHC2CQ9Y4E1 1318 aa13.8□□□□□ -0.2
CHKB-206ENST00000471515 FGD6Q6ZV73 1430 aa13.8□□□□□ -0.2
CHKB-206ENST00000471515 NLRP1Q9C000 1473 aa13.8□□□□□ -0.2
CHKB-206ENST00000471515 PRDM15P57071 1507 aaPredicted RBP13.8□□□□□ -0.2
CHKB-206ENST00000471515 ZNF335Q9H4Z2 1342 aaPredicted RBP13.79□□□□□ -0.2
CHKB-206ENST00000471515 DAPK1P53355 1430 aa13.78□□□□□ -0.2
CHKB-206ENST00000471515 ERVK-7P63135 1459 aa13.78□□□□□ -0.2
CHKB-206ENST00000471515 DEPDC5O75140 1603 aa13.77□□□□□ -0.21
CHKB-206ENST00000471515 ERBINQ96RT1 1412 aa13.77□□□□□ -0.21
CHKB-206ENST00000471515 POLR1AO95602 1720 aaPredicted RBP13.76□□□□□ -0.21
CHKB-206ENST00000471515 MED14O60244 1454 aa13.76□□□□□ -0.21
CHKB-206ENST00000471515 KIF15Q9NS87 1388 aa13.76□□□□□ -0.21
CHKB-206ENST00000471515 VWDEQ8N2E2 1590 aa13.75□□□□□ -0.21
CHKB-206ENST00000471515 ARHGAP31Q2M1Z3 1444 aa13.75□□□□□ -0.21
CHKB-206ENST00000471515 CEP152O94986 1710 aa13.75□□□□□ -0.21
CHKB-206ENST00000471515 UGGT1Q9NYU2 1555 aa13.75□□□□□ -0.21
CHKB-206ENST00000471515 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.73□□□□□ -0.21
CHKB-206ENST00000471515 ADGRL2O95490 1459 aa13.73□□□□□ -0.21
CHKB-206ENST00000471515 LMTK2Q8IWU2 1503 aa13.71□□□□□ -0.21
CHKB-206ENST00000471515 RRP7BPQ9NSQ0 103 aa13.7□□□□□ -0.22
CHKB-206ENST00000471515 UBR1Q8IWV7 1749 aa13.7□□□□□ -0.22
CHKB-206ENST00000471515 ARHGAP23Q9P227 1491 aa13.69□□□□□ -0.22
CHKB-206ENST00000471515 ALKQ9UM73 1620 aa13.68□□□□□ -0.22
CHKB-206ENST00000471515 NPHP4O75161 1426 aaPredicted RBP13.68□□□□□ -0.22
CHKB-206ENST00000471515 THEMISQ8N1K5 641 aaPredicted RBP13.68□□□□□ -0.22
CHKB-206ENST00000471515 SLIT1O75093 1534 aa13.68□□□□□ -0.22
CHKB-206ENST00000471515 CPS1P31327 1500 aa13.68□□□□□ -0.22
CHKB-206ENST00000471515 IQGAP1P46940 1657 aa13.67□□□□□ -0.22
CHKB-206ENST00000471515 ANKLE2Q86XL3 938 aa13.67□□□□□ -0.22
CHKB-206ENST00000471515 ANKRD30AQ9BXX3 1397 aa13.67□□□□□ -0.22
CHKB-206ENST00000471515 APLP2Q06481 763 aa13.66□□□□□ -0.22
CHKB-206ENST00000471515 DISP3Q9P2K9 1392 aa13.66□□□□□ -0.22
CHKB-206ENST00000471515 STRCP1A6NGW2 1772 aa13.66□□□□□ -0.22
CHKB-206ENST00000471515 EFCAB6Q5THR3 1501 aa13.65□□□□□ -0.22
CHKB-206ENST00000471515 SYNMO15061 1565 aa13.65□□□□□ -0.22
CHKB-206ENST00000471515 NOS1P29475 1434 aa13.64□□□□□ -0.23
CHKB-206ENST00000471515 KDM5AP29375 1690 aaKnown RBP13.63□□□□□ -0.23
CHKB-206ENST00000471515 SCAF11Q99590 1463 aaKnown RBP13.63□□□□□ -0.23
CHKB-206ENST00000471515 CHIC2Q9UKJ5 165 aa13.63□□□□□ -0.23
CHKB-206ENST00000471515 PIK3C2BO00750 1634 aa13.63□□□□□ -0.23
CHKB-206ENST00000471515 LTKP29376 864 aa13.62□□□□□ -0.23
CHKB-206ENST00000471515 CFAP65Q6ZU64 1925 aaKnown RBP13.62□□□□□ -0.23
CHKB-206ENST00000471515 ANKRD50Q9ULJ7 1429 aa13.61□□□□□ -0.23
CHKB-206ENST00000471515 LRRC7Q96NW7 1537 aa13.6□□□□□ -0.23
CHKB-206ENST00000471515 UBAP1LF5GYI3 381 aa13.6□□□□□ -0.23
CHKB-206ENST00000471515 SOCS7O14512 581 aa13.6□□□□□ -0.23
CHKB-206ENST00000471515 TMEM2Q9UHN6 1383 aa13.59□□□□□ -0.23
CHKB-206ENST00000471515 RPRD2Q5VT52 1461 aaKnown RBP13.59□□□□□ -0.23
CHKB-206ENST00000471515 KANK1Q14678 1352 aa13.58□□□□□ -0.23
CHKB-206ENST00000471515 UNC13BO14795 1591 aa13.58□□□□□ -0.23
CHKB-206ENST00000471515 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.58□□□□□ -0.245e-8■■■■□ 21.1
CHKB-206ENST00000471515 ROCK1Q13464 1354 aa13.58□□□□□ -0.24
CHKB-206ENST00000471515 TET3O43151 1660 aa13.57□□□□□ -0.24
CHKB-206ENST00000471515 IDI1Q13907 227 aa13.57□□□□□ -0.24
CHKB-206ENST00000471515 ADGRB3O60242 1522 aa13.56□□□□□ -0.24
CHKB-206ENST00000471515 ILDR2Q71H61 639 aa13.56□□□□□ -0.24
CHKB-206ENST00000471515 FAM50AQ14320 339 aaKnown RBP13.55□□□□□ -0.24
CHKB-206ENST00000471515 TXNDC2Q86VQ3 553 aa13.54□□□□□ -0.24
CHKB-206ENST00000471515 XIRP1Q702N8 1843 aaKnown RBP13.54□□□□□ -0.24
CHKB-206ENST00000471515 ZFYVE9O95405 1425 aa13.54□□□□□ -0.24
CHKB-206ENST00000471515 IQGAP3Q86VI3 1631 aa13.52□□□□□ -0.25
CHKB-206ENST00000471515 GCC2Q8IWJ2 1684 aa13.52□□□□□ -0.25
CHKB-206ENST00000471515 E9PCH4 1651 aa13.51□□□□□ -0.25
CHKB-206ENST00000471515 TMEM131LA2VDJ0 1609 aa13.51□□□□□ -0.25
CHKB-206ENST00000471515 TOM1O60784 492 aa13.51□□□□□ -0.25
CHKB-206ENST00000471515 HSPA1LP34931 641 aa13.51□□□□□ -0.25
CHKB-206ENST00000471515 SLC52A1Q9NWF4 448 aa13.51□□□□□ -0.25
CHKB-206ENST00000471515 NWD1Q149M9 1564 aa13.5□□□□□ -0.25
CHKB-206ENST00000471515 EID1Q9Y6B2 187 aa13.48□□□□□ -0.25
CHKB-206ENST00000471515 MYO5BQ9ULV0 1848 aa13.48□□□□□ -0.25
CHKB-206ENST00000471515 MED1Q15648 1581 aaPredicted RBP13.47□□□□□ -0.25
CHKB-206ENST00000471515 PIP4K2BP78356 416 aa13.47□□□□□ -0.25
CHKB-206ENST00000471515 RRBP1Q9P2E9 1410 aaKnown RBP13.47□□□□□ -0.25
CHKB-206ENST00000471515 PLEKHG1Q9ULL1 1385 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms