RNA–Protein interactions for RNA: ENST00000471494.5

RNF220-208, Transcript of ring finger protein 220, humanhuman

TSL 5

Gene RNF220, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-208ENST00000471494 SHANK2Q9UPX8 1470 aa36.47■■■■□ 3.43
RNF220-208ENST00000471494 RNF17Q9BXT8 1623 aaKnown RBP36.46■■■■□ 3.43
RNF220-208ENST00000471494 TCOF1Q13428 1488 aaKnown RBP36.46■■■■□ 3.43
RNF220-208ENST00000471494 DNMT1P26358 1616 aaKnown RBP36.45■■■■□ 3.43
RNF220-208ENST00000471494 ZNF142P52746 1687 aaPredicted RBP36.45■■■■□ 3.42
RNF220-208ENST00000471494 ABCC5O15440 1437 aa36.42■■■■□ 3.42
RNF220-208ENST00000471494 DUOX2Q9NRD8 1548 aa36.41■■■■□ 3.42
RNF220-208ENST00000471494 DAPK1P53355 1430 aa36.4■■■■□ 3.42
RNF220-208ENST00000471494 WASHC2CQ9Y4E1 1318 aa36.39■■■■□ 3.42
RNF220-208ENST00000471494 CEP170BQ9Y4F5 1589 aaPredicted RBP36.38■■■■□ 3.41
RNF220-208ENST00000471494 DMRT2Q9Y5R5 561 aa36.38■■■■□ 3.41
RNF220-208ENST00000471494 ZC3H13Q5T200 1668 aaKnown RBP36.38■■■■□ 3.41
RNF220-208ENST00000471494 CAMSAP1Q5T5Y3 1602 aa36.36■■■■□ 3.41
RNF220-208ENST00000471494 PZPP20742 1482 aa36.36■■■■□ 3.41
RNF220-208ENST00000471494 KIF15Q9NS87 1388 aa36.35■■■■□ 3.41
RNF220-208ENST00000471494 NCOA1Q15788 1441 aa36.34■■■■□ 3.41
RNF220-208ENST00000471494 MROH1Q8NDA8 1641 aa36.31■■■■□ 3.4
RNF220-208ENST00000471494 ABCC3O15438 1527 aa36.3■■■■□ 3.4
RNF220-208ENST00000471494 PTPRTO14522 1441 aa36.28■■■■□ 3.4
RNF220-208ENST00000471494 ERBINQ96RT1 1412 aa36.28■■■■□ 3.4
RNF220-208ENST00000471494 CEP152O94986 1710 aa36.28■■■■□ 3.4
RNF220-208ENST00000471494 TNRQ92752 1358 aa36.27■■■■□ 3.4
RNF220-208ENST00000471494 RRP7BPQ9NSQ0 103 aa36.26■■■■□ 3.4
RNF220-208ENST00000471494 A2ML1A8K2U0 1454 aa36.25■■■■□ 3.39
RNF220-208ENST00000471494 FBXO31Q5XUX0 539 aaPredicted RBP36.24■■■■□ 3.39
RNF220-208ENST00000471494 FBXO41Q8TF61 875 aa36.24■■■■□ 3.39
RNF220-208ENST00000471494 ANKRD30AQ9BXX3 1397 aa36.23■■■■□ 3.39
RNF220-208ENST00000471494 PLA2R1Q13018 1463 aa36.23■■■■□ 3.39
RNF220-208ENST00000471494 FAM50AQ14320 339 aaKnown RBP36.22■■■■□ 3.39
RNF220-208ENST00000471494 PRDM15P57071 1507 aaPredicted RBP36.22■■■■□ 3.39
RNF220-208ENST00000471494 CHIC2Q9UKJ5 165 aa36.2■■■■□ 3.39
RNF220-208ENST00000471494 DEPDC5O75140 1603 aa36.18■■■■□ 3.38
RNF220-208ENST00000471494 CFAP65Q6ZU64 1925 aaKnown RBP36.15■■■■□ 3.38
RNF220-208ENST00000471494 CERKQ8TCT0 537 aa36.15■■■■□ 3.38
RNF220-208ENST00000471494 ADGRL2O95490 1459 aa36.15■■■■□ 3.38
RNF220-208ENST00000471494 NLRP1Q9C000 1473 aa36.14■■■■□ 3.38
RNF220-208ENST00000471494 NCKAP5LQ9HCH0 1330 aa36.13■■■■□ 3.37
RNF220-208ENST00000471494 SPATA31D1Q6ZQQ2 1576 aa36.13■■■■□ 3.37
RNF220-208ENST00000471494 PKD2Q13563 968 aa36.11■■■■□ 3.37
RNF220-208ENST00000471494 POLR1AO95602 1720 aaPredicted RBP36.11■■■■□ 3.37
RNF220-208ENST00000471494 ERVK-7P63135 1459 aa36.1■■■■□ 3.37
RNF220-208ENST00000471494 KANK1Q14678 1352 aa36.07■■■■□ 3.36
RNF220-208ENST00000471494 GRWD1Q9BQ67 446 aaKnown RBP eCLIP36.06■■■■□ 3.364e-9■■□□□ 14.3
RNF220-208ENST00000471494 UGGT1Q9NYU2 1555 aa36.05■■■■□ 3.36
RNF220-208ENST00000471494 ARHGAP31Q2M1Z3 1444 aa36.01■■■■□ 3.36
RNF220-208ENST00000471494 PPARGC1BQ86YN6 1023 aaKnown RBP36.01■■■■□ 3.36
RNF220-208ENST00000471494 LTBP4Q8N2S1 1624 aa36■■■■□ 3.35
RNF220-208ENST00000471494 VWDEQ8N2E2 1590 aa35.98■■■■□ 3.35
RNF220-208ENST00000471494 THEMISQ8N1K5 641 aaPredicted RBP35.98■■■■□ 3.35
RNF220-208ENST00000471494 LMTK2Q8IWU2 1503 aa35.97■■■■□ 3.35
RNF220-208ENST00000471494 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.96■■■■□ 3.35
RNF220-208ENST00000471494 ANKRD50Q9ULJ7 1429 aa35.96■■■■□ 3.35
RNF220-208ENST00000471494 NEURL4Q96JN8 1562 aa35.96■■■■□ 3.35
RNF220-208ENST00000471494 UBR1Q8IWV7 1749 aa35.92■■■■□ 3.34
RNF220-208ENST00000471494 EFCAB6Q5THR3 1501 aa35.89■■■■□ 3.34
RNF220-208ENST00000471494 ANKLE2Q86XL3 938 aa35.89■■■■□ 3.34
RNF220-208ENST00000471494 ZNF335Q9H4Z2 1342 aaPredicted RBP35.88■■■■□ 3.33
RNF220-208ENST00000471494 ROCK1Q13464 1354 aa35.88■■■■□ 3.33
RNF220-208ENST00000471494 IQSEC2Q5JU85 1478 aa35.86■■■■□ 3.33
RNF220-208ENST00000471494 UNC13BO14795 1591 aa35.84■■■■□ 3.33
RNF220-208ENST00000471494 ITGAEP38570 1179 aa35.82■■■■□ 3.32
RNF220-208ENST00000471494 PIK3C2BO00750 1634 aa35.82■■■■□ 3.32
RNF220-208ENST00000471494 IQGAP1P46940 1657 aa35.81■■■■□ 3.32
RNF220-208ENST00000471494 MED14O60244 1454 aa35.8■■■■□ 3.32
RNF220-208ENST00000471494 TET3O43151 1660 aa35.8■■■■□ 3.32
RNF220-208ENST00000471494 NPHP4O75161 1426 aaPredicted RBP35.8■■■■□ 3.32
RNF220-208ENST00000471494 GCC2Q8IWJ2 1684 aa35.78■■■■□ 3.32
RNF220-208ENST00000471494 SYNMO15061 1565 aa35.77■■■■□ 3.32
RNF220-208ENST00000471494 KDM5AP29375 1690 aaKnown RBP35.75■■■■□ 3.31
RNF220-208ENST00000471494 RPRD2Q5VT52 1461 aaKnown RBP35.74■■■■□ 3.31
RNF220-208ENST00000471494 NOS1P29475 1434 aa35.73■■■■□ 3.31
RNF220-208ENST00000471494 SLIT1O75093 1534 aa35.73■■■■□ 3.31
RNF220-208ENST00000471494 RRBP1Q9P2E9 1410 aaKnown RBP35.72■■■■□ 3.31
RNF220-208ENST00000471494 SCAF11Q99590 1463 aaKnown RBP35.71■■■■□ 3.31
RNF220-208ENST00000471494 ARHGAP23Q9P227 1491 aa35.71■■■■□ 3.31
RNF220-208ENST00000471494 IQGAP3Q86VI3 1631 aa35.69■■■■□ 3.3
RNF220-208ENST00000471494 STAG3Q9UJ98 1225 aa35.69■■■■□ 3.3
RNF220-208ENST00000471494 CPS1P31327 1500 aa35.68■■■■□ 3.3
RNF220-208ENST00000471494 ADGRB3O60242 1522 aa35.64■■■■□ 3.3
RNF220-208ENST00000471494 IDI1Q13907 227 aa35.64■■■■□ 3.3
RNF220-208ENST00000471494 E9PCH4 1651 aa35.64■■■■□ 3.3
RNF220-208ENST00000471494 EID1Q9Y6B2 187 aa35.62■■■■□ 3.29
RNF220-208ENST00000471494 TMEM2Q9UHN6 1383 aa35.62■■■■□ 3.29
RNF220-208ENST00000471494 TXNDC2Q86VQ3 553 aa35.61■■■■□ 3.29
RNF220-208ENST00000471494 SLC52A1Q9NWF4 448 aa35.6■■■■□ 3.29
RNF220-208ENST00000471494 LTKP29376 864 aa35.59■■■■□ 3.29
RNF220-208ENST00000471494 NUP155O75694 1391 aa35.57■■■■□ 3.28
RNF220-208ENST00000471494 MYO5BQ9ULV0 1848 aa35.56■■■■□ 3.28
RNF220-208ENST00000471494 STRCP1A6NGW2 1772 aa35.55■■■■□ 3.28
RNF220-208ENST00000471494 UBAP1LF5GYI3 381 aa35.53■■■■□ 3.28
RNF220-208ENST00000471494 TMEM131LA2VDJ0 1609 aa35.47■■■■□ 3.27
RNF220-208ENST00000471494 NAIPQ13075 1403 aa35.45■■■■□ 3.27
RNF220-208ENST00000471494 SPHKAPQ2M3C7 1700 aa35.41■■■■□ 3.26
RNF220-208ENST00000471494 LRRC7Q96NW7 1537 aa35.4■■■■□ 3.26
RNF220-208ENST00000471494 CHGAP10645 457 aaKnown RBP35.37■■■■□ 3.25
RNF220-208ENST00000471494 HFM1A2PYH4 1435 aa35.37■■■■□ 3.25
RNF220-208ENST00000471494 ZFYVE9O95405 1425 aa35.37■■■■□ 3.25
RNF220-208ENST00000471494 RIMS2Q9UQ26 1411 aa35.36■■■■□ 3.25
RNF220-208ENST00000471494 TOM1O60784 492 aa35.35■■■■□ 3.25
RNF220-208ENST00000471494 PPP1R15AO75807 674 aaPredicted RBP35.32■■■■□ 3.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms