RNA–Protein interactions for RNA: ENST00000471427.1

POLR1A-206, Transcript of RNA polymerase I subunit A, humanhuman

TSL 2

Gene POLR1A, Length 290 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-206ENST00000471427 STRCQ7RTU9 1775 aa14.92□□□□□ -0.02
POLR1A-206ENST00000471427 SHANK2Q9UPX8 1470 aa14.91□□□□□ -0.02
POLR1A-206ENST00000471427 PKD2Q13563 968 aa14.91□□□□□ -0.02
POLR1A-206ENST00000471427 FBXO31Q5XUX0 539 aaPredicted RBP14.91□□□□□ -0.02
POLR1A-206ENST00000471427 CERKQ8TCT0 537 aa14.91□□□□□ -0.02
POLR1A-206ENST00000471427 NCOA1Q15788 1441 aa14.91□□□□□ -0.02
POLR1A-206ENST00000471427 PZPP20742 1482 aa14.89□□□□□ -0.03
POLR1A-206ENST00000471427 PTPN23Q9H3S7 1636 aa14.89□□□□□ -0.03
POLR1A-206ENST00000471427 KDM5DQ9BY66 1539 aa14.89□□□□□ -0.03
POLR1A-206ENST00000471427 DUOX2Q9NRD8 1548 aa14.89□□□□□ -0.03
POLR1A-206ENST00000471427 RRP7BPQ9NSQ0 103 aa14.89□□□□□ -0.03
POLR1A-206ENST00000471427 DAPK1P53355 1430 aa14.89□□□□□ -0.03
POLR1A-206ENST00000471427 TNRQ92752 1358 aa14.87□□□□□ -0.03
POLR1A-206ENST00000471427 KIF15Q9NS87 1388 aa14.87□□□□□ -0.03
POLR1A-206ENST00000471427 PLA2R1Q13018 1463 aa14.87□□□□□ -0.03
POLR1A-206ENST00000471427 EIF2AK4Q9P2K8 1649 aaKnown RBP14.86□□□□□ -0.03
POLR1A-206ENST00000471427 A2ML1A8K2U0 1454 aa14.86□□□□□ -0.03
POLR1A-206ENST00000471427 ANKRD30AQ9BXX3 1397 aa14.85□□□□□ -0.03
POLR1A-206ENST00000471427 CAMSAP1Q5T5Y3 1602 aa14.85□□□□□ -0.03
POLR1A-206ENST00000471427 RNF17Q9BXT8 1623 aaKnown RBP14.85□□□□□ -0.03
POLR1A-206ENST00000471427 ERBINQ96RT1 1412 aa14.85□□□□□ -0.03
POLR1A-206ENST00000471427 THEMISQ8N1K5 641 aaPredicted RBP14.85□□□□□ -0.03
POLR1A-206ENST00000471427 NCKAP5LQ9HCH0 1330 aa14.85□□□□□ -0.03
POLR1A-206ENST00000471427 CEP170BQ9Y4F5 1589 aaPredicted RBP14.84□□□□□ -0.03
POLR1A-206ENST00000471427 DNMT1P26358 1616 aaKnown RBP14.84□□□□□ -0.03
POLR1A-206ENST00000471427 CHIC2Q9UKJ5 165 aa14.83□□□□□ -0.04
POLR1A-206ENST00000471427 ZNF142P52746 1687 aaPredicted RBP14.83□□□□□ -0.04
POLR1A-206ENST00000471427 NLRP1Q9C000 1473 aa14.82□□□□□ -0.04
POLR1A-206ENST00000471427 ABCC3O15438 1527 aa14.82□□□□□ -0.04
POLR1A-206ENST00000471427 MYO3AQ8NEV4 1616 aa14.82□□□□□ -0.04
POLR1A-206ENST00000471427 FAM50AQ14320 339 aaKnown RBP14.82□□□□□ -0.04
POLR1A-206ENST00000471427 ARHGAP31Q2M1Z3 1444 aa14.82□□□□□ -0.04
POLR1A-206ENST00000471427 ANKLE2Q86XL3 938 aa14.8□□□□□ -0.04
POLR1A-206ENST00000471427 ADGRL2O95490 1459 aa14.8□□□□□ -0.04
POLR1A-206ENST00000471427 MROH1Q8NDA8 1641 aa14.8□□□□□ -0.04
POLR1A-206ENST00000471427 CROCC2H7BZ55 1655 aa14.79□□□□□ -0.04
POLR1A-206ENST00000471427 ZC3H13Q5T200 1668 aaKnown RBP14.79□□□□□ -0.04
POLR1A-206ENST00000471427 KANK1Q14678 1352 aa14.78□□□□□ -0.04
POLR1A-206ENST00000471427 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.78□□□□□ -0.04
POLR1A-206ENST00000471427 SPATA31D1Q6ZQQ2 1576 aa14.77□□□□□ -0.04
POLR1A-206ENST00000471427 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.77□□□□□ -0.052e-6■■□□□ 11.9
POLR1A-206ENST00000471427 LTBP4Q8N2S1 1624 aa14.77□□□□□ -0.05
POLR1A-206ENST00000471427 PRDM15P57071 1507 aaPredicted RBP14.76□□□□□ -0.05
POLR1A-206ENST00000471427 ERVK-7P63135 1459 aa14.76□□□□□ -0.05
POLR1A-206ENST00000471427 IQSEC2Q5JU85 1478 aa14.75□□□□□ -0.05
POLR1A-206ENST00000471427 ANKRD50Q9ULJ7 1429 aa14.75□□□□□ -0.05
POLR1A-206ENST00000471427 UGGT1Q9NYU2 1555 aa14.74□□□□□ -0.05
POLR1A-206ENST00000471427 LMTK2Q8IWU2 1503 aa14.74□□□□□ -0.05
POLR1A-206ENST00000471427 DEPDC5O75140 1603 aa14.74□□□□□ -0.05
POLR1A-206ENST00000471427 ROCK1Q13464 1354 aa14.73□□□□□ -0.05
POLR1A-206ENST00000471427 ZNF335Q9H4Z2 1342 aaPredicted RBP14.73□□□□□ -0.05
POLR1A-206ENST00000471427 VWDEQ8N2E2 1590 aa14.73□□□□□ -0.05
POLR1A-206ENST00000471427 MED14O60244 1454 aa14.72□□□□□ -0.05
POLR1A-206ENST00000471427 IDI1Q13907 227 aa14.7□□□□□ -0.06
POLR1A-206ENST00000471427 SLC52A1Q9NWF4 448 aa14.7□□□□□ -0.06
POLR1A-206ENST00000471427 CEP152O94986 1710 aa14.69□□□□□ -0.06
POLR1A-206ENST00000471427 CFAP65Q6ZU64 1925 aaKnown RBP14.69□□□□□ -0.06
POLR1A-206ENST00000471427 PPARGC1BQ86YN6 1023 aaKnown RBP14.68□□□□□ -0.06
POLR1A-206ENST00000471427 NEURL4Q96JN8 1562 aa14.68□□□□□ -0.06
POLR1A-206ENST00000471427 NPHP4O75161 1426 aaPredicted RBP14.67□□□□□ -0.06
POLR1A-206ENST00000471427 NOS1P29475 1434 aa14.67□□□□□ -0.06
POLR1A-206ENST00000471427 TXNDC2Q86VQ3 553 aa14.67□□□□□ -0.06
POLR1A-206ENST00000471427 RPRD2Q5VT52 1461 aaKnown RBP14.66□□□□□ -0.06
POLR1A-206ENST00000471427 LTKP29376 864 aa14.66□□□□□ -0.06
POLR1A-206ENST00000471427 EID1Q9Y6B2 187 aa14.66□□□□□ -0.06
POLR1A-206ENST00000471427 ARHGAP23Q9P227 1491 aa14.65□□□□□ -0.06
POLR1A-206ENST00000471427 SLIT1O75093 1534 aa14.65□□□□□ -0.06
POLR1A-206ENST00000471427 POLR1AO95602 1720 aaPredicted RBP14.64□□□□□ -0.07
POLR1A-206ENST00000471427 TMEM2Q9UHN6 1383 aa14.64□□□□□ -0.07
POLR1A-206ENST00000471427 STAG3Q9UJ98 1225 aa14.64□□□□□ -0.07
POLR1A-206ENST00000471427 RRBP1Q9P2E9 1410 aaKnown RBP14.64□□□□□ -0.07
POLR1A-206ENST00000471427 UBR1Q8IWV7 1749 aa14.63□□□□□ -0.07
POLR1A-206ENST00000471427 CPS1P31327 1500 aa14.62□□□□□ -0.07
POLR1A-206ENST00000471427 EFCAB6Q5THR3 1501 aa14.62□□□□□ -0.07
POLR1A-206ENST00000471427 ITGAEP38570 1179 aa14.62□□□□□ -0.07
POLR1A-206ENST00000471427 SCAF11Q99590 1463 aaKnown RBP14.62□□□□□ -0.07
POLR1A-206ENST00000471427 UBAP1LF5GYI3 381 aa14.61□□□□□ -0.07
POLR1A-206ENST00000471427 HDGFP51858 240 aaKnown RBP14.6□□□□□ -0.07
POLR1A-206ENST00000471427 KDM5AP29375 1690 aaKnown RBP14.6□□□□□ -0.07
POLR1A-206ENST00000471427 NUP155O75694 1391 aa14.6□□□□□ -0.07
POLR1A-206ENST00000471427 TOM1O60784 492 aa14.59□□□□□ -0.07
POLR1A-206ENST00000471427 UNC13BO14795 1591 aa14.58□□□□□ -0.08
POLR1A-206ENST00000471427 SYNMO15061 1565 aa14.58□□□□□ -0.08
POLR1A-206ENST00000471427 IQGAP1P46940 1657 aa14.58□□□□□ -0.08
POLR1A-206ENST00000471427 PIK3C2BO00750 1634 aa14.57□□□□□ -0.08
POLR1A-206ENST00000471427 TET3O43151 1660 aa14.57□□□□□ -0.08
POLR1A-206ENST00000471427 IQGAP3Q86VI3 1631 aa14.53□□□□□ -0.08
POLR1A-206ENST00000471427 KCNA6P17658 529 aa14.53□□□□□ -0.08
POLR1A-206ENST00000471427 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.53□□□□□ -0.08
POLR1A-206ENST00000471427 GCC2Q8IWJ2 1684 aa14.52□□□□□ -0.08
POLR1A-206ENST00000471427 ADGRB3O60242 1522 aa14.52□□□□□ -0.08
POLR1A-206ENST00000471427 NAIPQ13075 1403 aa14.52□□□□□ -0.08
POLR1A-206ENST00000471427 LRRC7Q96NW7 1537 aa14.51□□□□□ -0.09
POLR1A-206ENST00000471427 ZFYVE9O95405 1425 aa14.51□□□□□ -0.09
POLR1A-206ENST00000471427 SLC26A8Q96RN1 970 aa14.5□□□□□ -0.09
POLR1A-206ENST00000471427 TBX22Q9Y458 520 aa14.5□□□□□ -0.09
POLR1A-206ENST00000471427 PLEKHG1Q9ULL1 1385 aa14.49□□□□□ -0.09
POLR1A-206ENST00000471427 HFM1A2PYH4 1435 aa14.49□□□□□ -0.09
POLR1A-206ENST00000471427 E9PCH4 1651 aa14.49□□□□□ -0.09
POLR1A-206ENST00000471427 TMEM131LA2VDJ0 1609 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms