RNA–Protein interactions for RNA: ENST00000471250.5

U2AF1-208, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 1,676 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-208ENST00000471250 KIF13AQ9H1H9 1805 aa37.44■■■■□ 3.58
U2AF1-208ENST00000471250 EIF2AK4Q9P2K8 1649 aaKnown RBP37.44■■■■□ 3.58
U2AF1-208ENST00000471250 RICTORQ6R327 1708 aa37.43■■■■□ 3.58
U2AF1-208ENST00000471250 TSPOAP1O95153 1857 aa37.41■■■■□ 3.58
U2AF1-208ENST00000471250 TEX14Q8IWB6 1497 aa37.41■■■■□ 3.58
U2AF1-208ENST00000471250 DEPDC5O75140 1603 aa37.41■■■■□ 3.58
U2AF1-208ENST00000471250 GRWD1Q9BQ67 446 aaKnown RBP eCLIP37.41■■■■□ 3.58
U2AF1-208ENST00000471250 RAPGEF3O95398 923 aa37.37■■■■□ 3.57
U2AF1-208ENST00000471250 A2MP01023 1474 aa37.35■■■■□ 3.57
U2AF1-208ENST00000471250 ABCA6Q8N139 1617 aa37.32■■■■□ 3.57
U2AF1-208ENST00000471250 FRMPD1Q5SYB0 1578 aa37.31■■■■□ 3.56
U2AF1-208ENST00000471250 KIF3BO15066 747 aa37.28■■■■□ 3.56
U2AF1-208ENST00000471250 VWDEQ8N2E2 1590 aa37.27■■■■□ 3.56
U2AF1-208ENST00000471250 PRDM15P57071 1507 aaPredicted RBP37.25■■■■□ 3.55
U2AF1-208ENST00000471250 MROH1Q8NDA8 1641 aa37.24■■■■□ 3.55
U2AF1-208ENST00000471250 ZMYM4Q5VZL5 1548 aa37.24■■■■□ 3.55
U2AF1-208ENST00000471250 L3MBTL2Q969R5 705 aa37.24■■■■□ 3.55
U2AF1-208ENST00000471250 DIP2CQ9Y2E4 1556 aa37.24■■■■□ 3.55
U2AF1-208ENST00000471250 BCORL1Q5H9F3 1711 aa37.23■■■■□ 3.55
U2AF1-208ENST00000471250 KANK1Q14678 1352 aa37.23■■■■□ 3.55
U2AF1-208ENST00000471250 RNF17Q9BXT8 1623 aaKnown RBP37.21■■■■□ 3.55
U2AF1-208ENST00000471250 TET3O43151 1660 aa37.18■■■■□ 3.54
U2AF1-208ENST00000471250 ATP10AO60312 1499 aa37.16■■■■□ 3.54
U2AF1-208ENST00000471250 PLA2R1Q13018 1463 aa37.16■■■■□ 3.54
U2AF1-208ENST00000471250 E9PCH4 1651 aa37.15■■■■□ 3.54
U2AF1-208ENST00000471250 YEATS2Q9ULM3 1422 aa37.13■■■■□ 3.53
U2AF1-208ENST00000471250 CCDC144AA2RUR9 1427 aa37.09■■■■□ 3.53
U2AF1-208ENST00000471250 LMTK2Q8IWU2 1503 aa37.08■■■■□ 3.53
U2AF1-208ENST00000471250 DIEXFQ68CQ4 756 aaKnown RBP37.02■■■■□ 3.52
U2AF1-208ENST00000471250 COL17A1Q9UMD9 1497 aaPredicted RBP37.02■■■■□ 3.52
U2AF1-208ENST00000471250 PTPRTO14522 1441 aa37.02■■■■□ 3.52
U2AF1-208ENST00000471250 CEP152O94986 1710 aa37.01■■■■□ 3.52
U2AF1-208ENST00000471250 SPHKAPQ2M3C7 1700 aa37.01■■■■□ 3.52
U2AF1-208ENST00000471250 DNAJC5Q9H3Z4 198 aa37■■■■□ 3.51
U2AF1-208ENST00000471250 EFCAB6Q5THR3 1501 aa37■■■■□ 3.51
U2AF1-208ENST00000471250 TRPM2O94759 1503 aa36.99■■■■□ 3.51
U2AF1-208ENST00000471250 REREQ9P2R6 1566 aa36.97■■■■□ 3.51
U2AF1-208ENST00000471250 GGT6Q6P531 493 aa36.97■■■■□ 3.51
U2AF1-208ENST00000471250 NBPF8Q3BBV2 869 aa36.96■■■■□ 3.51
U2AF1-208ENST00000471250 ABCC3O15438 1527 aa36.92■■■■□ 3.5
U2AF1-208ENST00000471250 UHRF1BP1Q6BDS2 1440 aa36.91■■■■□ 3.5
U2AF1-208ENST00000471250 AGLP35573 1532 aa36.87■■■■□ 3.49
U2AF1-208ENST00000471250 ARHGEF40Q8TER5 1519 aa36.86■■■■□ 3.49
U2AF1-208ENST00000471250 WASHC2CQ9Y4E1 1318 aa36.86■■■■□ 3.49
U2AF1-208ENST00000471250 ZC3H13Q5T200 1668 aaKnown RBP36.86■■■■□ 3.49
U2AF1-208ENST00000471250 CLTCL1P53675 1640 aa36.86■■■■□ 3.49
U2AF1-208ENST00000471250 CAMSAP1Q5T5Y3 1602 aa36.83■■■■□ 3.49
U2AF1-208ENST00000471250 DCAF11Q8TEB1 546 aa36.82■■■■□ 3.48
U2AF1-208ENST00000471250 NPATQ14207 1427 aa36.8■■■■□ 3.48
U2AF1-208ENST00000471250 SPATA31E1Q6ZUB1 1445 aa36.8■■■■□ 3.48
U2AF1-208ENST00000471250 RGL3Q3MIN7 710 aa36.77■■■■□ 3.48
U2AF1-208ENST00000471250 KDM2AQ9Y2K7 1162 aa36.76■■■■□ 3.47
U2AF1-208ENST00000471250 TRHP20396 242 aaPredicted RBP36.75■■■■□ 3.47
U2AF1-208ENST00000471250 NEURL4Q96JN8 1562 aa36.75■■■■□ 3.47
U2AF1-208ENST00000471250 ARHGAP31Q2M1Z3 1444 aa36.74■■■■□ 3.47
U2AF1-208ENST00000471250 EIF4G2P78344 907 aaKnown RBP eCLIP36.74■■■■□ 3.47
U2AF1-208ENST00000471250 ZNF326Q5BKZ1 582 aaKnown RBP36.74■■■■□ 3.47
U2AF1-208ENST00000471250 HIRIP3Q9BW71 556 aaPredicted RBP36.74■■■■□ 3.47
U2AF1-208ENST00000471250 RALGAPBQ86X10 1494 aa36.74■■■■□ 3.47
U2AF1-208ENST00000471250 SIGLEC1Q9BZZ2 1709 aa36.73■■■■□ 3.47
U2AF1-208ENST00000471250 HSPA5P11021 654 aaKnown RBP36.72■■■■□ 3.47
U2AF1-208ENST00000471250 CNTLNQ9NXG0 1405 aa36.7■■■■□ 3.47
U2AF1-208ENST00000471250 PPP6R1Q9UPN7 881 aa36.7■■■■□ 3.47
U2AF1-208ENST00000471250 PRAG1Q86YV5 1406 aa36.7■■■■□ 3.46
U2AF1-208ENST00000471250 UGGT1Q9NYU2 1555 aa36.68■■■■□ 3.46
U2AF1-208ENST00000471250 KIF1BO60333 1816 aa36.67■■■■□ 3.46
U2AF1-208ENST00000471250 CFAP65Q6ZU64 1925 aaKnown RBP36.66■■■■□ 3.46
U2AF1-208ENST00000471250 NOS1P29475 1434 aa36.66■■■■□ 3.46
U2AF1-208ENST00000471250 TRPM1Q7Z4N2 1603 aa36.62■■■■□ 3.45
U2AF1-208ENST00000471250 STAC3Q96MF2 364 aa36.61■■■■□ 3.45
U2AF1-208ENST00000471250 SYNMO15061 1565 aa36.56■■■■□ 3.44
U2AF1-208ENST00000471250 PIK3C2BO00750 1634 aa36.55■■■■□ 3.44
U2AF1-208ENST00000471250 MROH2AA6NES4 1674 aa36.55■■■■□ 3.44
U2AF1-208ENST00000471250 ADGRB3O60242 1522 aa36.54■■■■□ 3.44
U2AF1-208ENST00000471250 CLTCQ00610 1675 aaKnown RBP36.53■■■■□ 3.44
U2AF1-208ENST00000471250 PREX1Q8TCU6 1659 aa36.53■■■■□ 3.44
U2AF1-208ENST00000471250 USP47Q96K76 1375 aa36.52■■■■□ 3.44
U2AF1-208ENST00000471250 MADDQ8WXG6 1647 aa36.52■■■■□ 3.44
U2AF1-208ENST00000471250 CARD11Q9BXL7 1154 aa36.51■■■■□ 3.44
U2AF1-208ENST00000471250 ROCK2O75116 1388 aaKnown RBP36.51■■■■□ 3.43
U2AF1-208ENST00000471250 IFT172Q9UG01 1749 aa36.49■■■■□ 3.43
U2AF1-208ENST00000471250 LAMC1P11047 1609 aa36.49■■■■□ 3.43
U2AF1-208ENST00000471250 GPRASP1Q5JY77 1395 aa36.48■■■■□ 3.43
U2AF1-208ENST00000471250 MLECQ14165 292 aa36.47■■■■□ 3.43
U2AF1-208ENST00000471250 DDX10Q13206 875 aaKnown RBP36.46■■■■□ 3.43
U2AF1-208ENST00000471250 MYOM2P54296 1465 aa36.46■■■■□ 3.43
U2AF1-208ENST00000471250 MIER1Q8N108 512 aa36.45■■■■□ 3.42
U2AF1-208ENST00000471250 ERVK-7P63135 1459 aa36.43■■■■□ 3.42
U2AF1-208ENST00000471250 SLC52A1Q9NWF4 448 aa36.42■■■■□ 3.42
U2AF1-208ENST00000471250 NBPF1Q3BBV0 1214 aa36.41■■■■□ 3.42
U2AF1-208ENST00000471250 CHGAP10645 457 aaKnown RBP36.4■■■■□ 3.42
U2AF1-208ENST00000471250 WASHC2AQ641Q2 1341 aa36.4■■■■□ 3.42
U2AF1-208ENST00000471250 POLR1AO95602 1720 aaPredicted RBP36.4■■■■□ 3.42
U2AF1-208ENST00000471250 ARID4BQ4LE39 1312 aaPredicted RBP36.39■■■■□ 3.42
U2AF1-208ENST00000471250 PPLO60437 1756 aa36.37■■■■□ 3.41
U2AF1-208ENST00000471250 KIAA1210Q9ULL0 1709 aa36.37■■■■□ 3.41
U2AF1-208ENST00000471250 RPGRIP1LQ68CZ1 1315 aa36.37■■■■□ 3.41
U2AF1-208ENST00000471250 IDI1Q13907 227 aa36.36■■■■□ 3.41
U2AF1-208ENST00000471250 FBXO31Q5XUX0 539 aaPredicted RBP36.36■■■■□ 3.41
U2AF1-208ENST00000471250 SPATA31D1Q6ZQQ2 1576 aa36.35■■■■□ 3.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms