RNA–Protein interactions for RNA: ENST00000471046.1

LAMP1-202, Transcript of lysosomal associated membrane protein 1, humanhuman

TSL 3

Gene LAMP1, Length 424 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1-202ENST00000471046 PIP4K2BP78356 416 aa21.08■□□□□ 0.97
LAMP1-202ENST00000471046 IQGAP1P46940 1657 aa21.07■□□□□ 0.96
LAMP1-202ENST00000471046 KDM5DQ9BY66 1539 aa21.07■□□□□ 0.96
LAMP1-202ENST00000471046 FAM135AQ9P2D6 1515 aa21.06■□□□□ 0.96
LAMP1-202ENST00000471046 PZPP20742 1482 aa21.06■□□□□ 0.96
LAMP1-202ENST00000471046 CCNB3Q8WWL7 1395 aa21.04■□□□□ 0.96
LAMP1-202ENST00000471046 TNRQ92752 1358 aa21.04■□□□□ 0.96
LAMP1-202ENST00000471046 MBD5Q9P267 1494 aa21.04■□□□□ 0.96
LAMP1-202ENST00000471046 RNF17Q9BXT8 1623 aaKnown RBP21.04■□□□□ 0.96
LAMP1-202ENST00000471046 SYNMO15061 1565 aa21.03■□□□□ 0.96
LAMP1-202ENST00000471046 CFDP1Q9UEE9 299 aaPredicted RBP21.03■□□□□ 0.96
LAMP1-202ENST00000471046 TOM1O60784 492 aa21.02■□□□□ 0.96
LAMP1-202ENST00000471046 MED14O60244 1454 aa21.01■□□□□ 0.95
LAMP1-202ENST00000471046 ZC3H13Q5T200 1668 aaKnown RBP21■□□□□ 0.95
LAMP1-202ENST00000471046 XIRP1Q702N8 1843 aaKnown RBP21■□□□□ 0.95
LAMP1-202ENST00000471046 RTEL1-TNFRSF6BF6WH68 1400 aa21■□□□□ 0.95
LAMP1-202ENST00000471046 EHBP1L1Q8N3D4 1523 aa20.99■□□□□ 0.95
LAMP1-202ENST00000471046 UGGT1Q9NYU2 1555 aa20.99■□□□□ 0.95
LAMP1-202ENST00000471046 FBXO31Q5XUX0 539 aaPredicted RBP20.98■□□□□ 0.95
LAMP1-202ENST00000471046 ZNF644Q9H582 1327 aaPredicted RBP20.98■□□□□ 0.95
LAMP1-202ENST00000471046 DHX29Q7Z478 1369 aaKnown RBP20.97■□□□□ 0.95
LAMP1-202ENST00000471046 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.97■□□□□ 0.95
LAMP1-202ENST00000471046 NPHP4O75161 1426 aaPredicted RBP20.96■□□□□ 0.95
LAMP1-202ENST00000471046 NLRP1Q9C000 1473 aa20.96■□□□□ 0.95
LAMP1-202ENST00000471046 CFAP65Q6ZU64 1925 aaKnown RBP20.95■□□□□ 0.94
LAMP1-202ENST00000471046 MTUS2Q5JR59 1369 aa20.95■□□□□ 0.94
LAMP1-202ENST00000471046 LRRC7Q96NW7 1537 aa20.94■□□□□ 0.94
LAMP1-202ENST00000471046 PHF23Q9BUL5 403 aaPredicted RBP20.93■□□□□ 0.94
LAMP1-202ENST00000471046 CCDC141Q6ZP82 1450 aa20.93■□□□□ 0.94
LAMP1-202ENST00000471046 UBR1Q8IWV7 1749 aa20.92■□□□□ 0.94
LAMP1-202ENST00000471046 CEP152O94986 1710 aa20.92■□□□□ 0.94
LAMP1-202ENST00000471046 CHIC1Q5VXU3 224 aa20.91■□□□□ 0.94
LAMP1-202ENST00000471046 MIA2Q96PC5 1412 aa20.91■□□□□ 0.94
LAMP1-202ENST00000471046 CAMSAP2Q08AD1 1489 aa20.9■□□□□ 0.94
LAMP1-202ENST00000471046 ANKLE2Q86XL3 938 aa20.9■□□□□ 0.94
LAMP1-202ENST00000471046 KIF3BO15066 747 aa20.89■□□□□ 0.93
LAMP1-202ENST00000471046 CEP162Q5TB80 1403 aa20.88■□□□□ 0.93
LAMP1-202ENST00000471046 ARHGEF5Q12774 1597 aa20.87■□□□□ 0.93
LAMP1-202ENST00000471046 MROH1Q8NDA8 1641 aa20.86■□□□□ 0.93
LAMP1-202ENST00000471046 ABCC3O15438 1527 aa20.86■□□□□ 0.93
LAMP1-202ENST00000471046 THEMISQ8N1K5 641 aaPredicted RBP20.85■□□□□ 0.93
LAMP1-202ENST00000471046 EIF2AK4Q9P2K8 1649 aaKnown RBP20.85■□□□□ 0.93
LAMP1-202ENST00000471046 SENP3Q9H4L4 574 aaPredicted RBP20.84■□□□□ 0.93
LAMP1-202ENST00000471046 WASHC2CQ9Y4E1 1318 aa20.83■□□□□ 0.93
LAMP1-202ENST00000471046 ERVK-7P63135 1459 aa20.82■□□□□ 0.92
LAMP1-202ENST00000471046 MAST1Q9Y2H9 1570 aa20.8■□□□□ 0.92
LAMP1-202ENST00000471046 RGS17Q9UGC6 210 aaPredicted RBP20.8■□□□□ 0.92
LAMP1-202ENST00000471046 SETD1AO15047 1707 aaKnown RBP20.8■□□□□ 0.92
LAMP1-202ENST00000471046 NCOA2Q15596 1464 aa20.8■□□□□ 0.92
LAMP1-202ENST00000471046 SCAF11Q99590 1463 aaKnown RBP20.76■□□□□ 0.91
LAMP1-202ENST00000471046 SLIT1O75093 1534 aa20.75■□□□□ 0.91
LAMP1-202ENST00000471046 ARHGAP23Q9P227 1491 aa20.75■□□□□ 0.91
LAMP1-202ENST00000471046 ROBO1Q9Y6N7 1651 aa20.73■□□□□ 0.91
LAMP1-202ENST00000471046 PIK3C2BO00750 1634 aa20.73■□□□□ 0.91
LAMP1-202ENST00000471046 CROCC2H7BZ55 1655 aa20.68■□□□□ 0.9
LAMP1-202ENST00000471046 RSPH4AQ5TD94 716 aa20.68■□□□□ 0.9
LAMP1-202ENST00000471046 PRDM15P57071 1507 aaPredicted RBP20.68■□□□□ 0.9
LAMP1-202ENST00000471046 MAP3K1Q13233 1512 aa20.68■□□□□ 0.9
LAMP1-202ENST00000471046 KDM5AP29375 1690 aaKnown RBP20.67■□□□□ 0.9
LAMP1-202ENST00000471046 FAM135BQ49AJ0 1406 aa20.65■□□□□ 0.9
LAMP1-202ENST00000471046 LTKP29376 864 aa20.65■□□□□ 0.9
LAMP1-202ENST00000471046 POTEAQ6S8J7 498 aa20.64■□□□□ 0.89
LAMP1-202ENST00000471046 PHLPP1O60346 1717 aa20.64■□□□□ 0.89
LAMP1-202ENST00000471046 DUOX2Q9NRD8 1548 aa20.63■□□□□ 0.89
LAMP1-202ENST00000471046 NWD1Q149M9 1564 aa20.62■□□□□ 0.89
LAMP1-202ENST00000471046 TSPY4P0CV99 314 aa20.61■□□□□ 0.89
LAMP1-202ENST00000471046 TSPY10P0CW01 314 aa20.61■□□□□ 0.89
LAMP1-202ENST00000471046 ARHGAP31Q2M1Z3 1444 aa20.6■□□□□ 0.89
LAMP1-202ENST00000471046 TET3O43151 1660 aa20.59■□□□□ 0.89
LAMP1-202ENST00000471046 MYO5BQ9ULV0 1848 aa20.59■□□□□ 0.89
LAMP1-202ENST00000471046 TXNDC2Q86VQ3 553 aa20.58■□□□□ 0.89
LAMP1-202ENST00000471046 LRRC9Q6ZRR7 1453 aa20.57■□□□□ 0.88
LAMP1-202ENST00000471046 TMEM94Q12767 1356 aa20.57■□□□□ 0.88
LAMP1-202ENST00000471046 EFCAB6Q5THR3 1501 aa20.56■□□□□ 0.88
LAMP1-202ENST00000471046 CHD2O14647 1828 aaKnown RBP20.55■□□□□ 0.88
LAMP1-202ENST00000471046 COL16A1Q07092 1604 aaPredicted RBP20.54■□□□□ 0.88
LAMP1-202ENST00000471046 TMEM2Q9UHN6 1383 aa20.54■□□□□ 0.88
LAMP1-202ENST00000471046 NKTRP30414 1462 aaKnown RBP20.53■□□□□ 0.88
LAMP1-202ENST00000471046 ADGRB3O60242 1522 aa20.52■□□□□ 0.87
LAMP1-202ENST00000471046 ERBINQ96RT1 1412 aa20.51■□□□□ 0.87
LAMP1-202ENST00000471046 EID1Q9Y6B2 187 aa20.5■□□□□ 0.87
LAMP1-202ENST00000471046 MYOM3Q5VTT5 1437 aa20.49■□□□□ 0.87
LAMP1-202ENST00000471046 LMTK2Q8IWU2 1503 aa20.48■□□□□ 0.87
LAMP1-202ENST00000471046 KIF15Q9NS87 1388 aa20.48■□□□□ 0.87
LAMP1-202ENST00000471046 GCC2Q8IWJ2 1684 aa20.48■□□□□ 0.87
LAMP1-202ENST00000471046 SHPRHQ149N8 1683 aa20.47■□□□□ 0.87
LAMP1-202ENST00000471046 KCNA6P17658 529 aa20.46■□□□□ 0.87
LAMP1-202ENST00000471046 RBM33Q96EV2 1170 aaKnown RBP20.46■□□□□ 0.87
LAMP1-202ENST00000471046 LRP6O75581 1613 aa20.45■□□□□ 0.87
LAMP1-202ENST00000471046 PTPN23Q9H3S7 1636 aa20.45■□□□□ 0.87
LAMP1-202ENST00000471046 JCADQ9P266 1359 aa20.43■□□□□ 0.86
LAMP1-202ENST00000471046 PROSER2Q86WR7 435 aaPredicted RBP20.42■□□□□ 0.86
LAMP1-202ENST00000471046 SLC26A8Q96RN1 970 aa20.42■□□□□ 0.86
LAMP1-202ENST00000471046 VPS8Q8N3P4 1428 aa20.42■□□□□ 0.86
LAMP1-202ENST00000471046 MSH6P52701 1360 aa20.41■□□□□ 0.86
LAMP1-202ENST00000471046 ABCC5O15440 1437 aa20.41■□□□□ 0.86
LAMP1-202ENST00000471046 NOS1P29475 1434 aa20.41■□□□□ 0.86
LAMP1-202ENST00000471046 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.41■□□□□ 0.86
LAMP1-202ENST00000471046 AHDC1Q5TGY3 1603 aaPredicted RBP20.39■□□□□ 0.86
LAMP1-202ENST00000471046 IDI1Q13907 227 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms