RNA–Protein interactions for RNA: ENST00000471039.1

SCNM1-205, Transcript of sodium channel modifier 1, humanhuman

TSL 2

Gene SCNM1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-205ENST00000471039 GCC2Q8IWJ2 1684 aa19.05■□□□□ 0.64
SCNM1-205ENST00000471039 ANKRD30AQ9BXX3 1397 aa19.05■□□□□ 0.64
SCNM1-205ENST00000471039 KDM5DQ9BY66 1539 aa19.05■□□□□ 0.64
SCNM1-205ENST00000471039 NCOA1Q15788 1441 aa19.04■□□□□ 0.64
SCNM1-205ENST00000471039 AEBP2Q6ZN18 517 aaPredicted RBP19.03■□□□□ 0.64
SCNM1-205ENST00000471039 CNTLNQ9NXG0 1405 aa19.02■□□□□ 0.64
SCNM1-205ENST00000471039 PREX1Q8TCU6 1659 aa19.01■□□□□ 0.63
SCNM1-205ENST00000471039 CAMSAP1Q5T5Y3 1602 aa19■□□□□ 0.63
SCNM1-205ENST00000471039 UNC13BO14795 1591 aa18.99■□□□□ 0.63
SCNM1-205ENST00000471039 ROCK1Q13464 1354 aa18.99■□□□□ 0.63
SCNM1-205ENST00000471039 CHIC2Q9UKJ5 165 aa18.99■□□□□ 0.63
SCNM1-205ENST00000471039 ABCC3O15438 1527 aa18.98■□□□□ 0.63
SCNM1-205ENST00000471039 KIF3BO15066 747 aa18.97■□□□□ 0.63
SCNM1-205ENST00000471039 RRP7BPQ9NSQ0 103 aa18.97■□□□□ 0.63
SCNM1-205ENST00000471039 VWDEQ8N2E2 1590 aa18.96■□□□□ 0.63
SCNM1-205ENST00000471039 ANKRD50Q9ULJ7 1429 aa18.94■□□□□ 0.62
SCNM1-205ENST00000471039 MYO3AQ8NEV4 1616 aa18.94■□□□□ 0.62
SCNM1-205ENST00000471039 GGT6Q6P531 493 aa18.94■□□□□ 0.62
SCNM1-205ENST00000471039 ZNF142P52746 1687 aaPredicted RBP18.92■□□□□ 0.62
SCNM1-205ENST00000471039 ITGAEP38570 1179 aa18.92■□□□□ 0.62
SCNM1-205ENST00000471039 ESF1Q9H501 851 aaKnown RBP18.91■□□□□ 0.62
SCNM1-205ENST00000471039 IQGAP3Q86VI3 1631 aa18.9■□□□□ 0.62
SCNM1-205ENST00000471039 PPP6R1Q9UPN7 881 aa18.9■□□□□ 0.62
SCNM1-205ENST00000471039 PZPP20742 1482 aa18.9■□□□□ 0.62
SCNM1-205ENST00000471039 LMTK3Q96Q04 1460 aa18.9■□□□□ 0.62
SCNM1-205ENST00000471039 TET3O43151 1660 aa18.89■□□□□ 0.61
SCNM1-205ENST00000471039 SETD1BQ9UPS6 1966 aaKnown RBP18.89■□□□□ 0.61
SCNM1-205ENST00000471039 EFCAB6Q5THR3 1501 aa18.89■□□□□ 0.61
SCNM1-205ENST00000471039 LMTK2Q8IWU2 1503 aa18.89■□□□□ 0.61
SCNM1-205ENST00000471039 NPATQ14207 1427 aa18.88■□□□□ 0.61
SCNM1-205ENST00000471039 ZMYM3Q14202 1370 aa18.87■□□□□ 0.61
SCNM1-205ENST00000471039 PLPPR3Q6T4P5 718 aa18.87■□□□□ 0.61
SCNM1-205ENST00000471039 HFM1A2PYH4 1435 aa18.86■□□□□ 0.61
SCNM1-205ENST00000471039 NAIPQ13075 1403 aa18.86■□□□□ 0.61
SCNM1-205ENST00000471039 CEBPAP49715 358 aaPredicted RBP18.86■□□□□ 0.61
SCNM1-205ENST00000471039 CFAP65Q6ZU64 1925 aaKnown RBP18.86■□□□□ 0.61
SCNM1-205ENST00000471039 SPATA31D1Q6ZQQ2 1576 aa18.85■□□□□ 0.61
SCNM1-205ENST00000471039 WASHC2CQ9Y4E1 1318 aa18.83■□□□□ 0.61
SCNM1-205ENST00000471039 CEP170BQ9Y4F5 1589 aaPredicted RBP18.83■□□□□ 0.6
SCNM1-205ENST00000471039 E9PCH4 1651 aa18.82■□□□□ 0.6
SCNM1-205ENST00000471039 UHRF1BP1Q6BDS2 1440 aa18.82■□□□□ 0.6
SCNM1-205ENST00000471039 KANK1Q14678 1352 aa18.81■□□□□ 0.6
SCNM1-205ENST00000471039 ERVK-7P63135 1459 aa18.81■□□□□ 0.6
SCNM1-205ENST00000471039 ARHGAP31Q2M1Z3 1444 aa18.8■□□□□ 0.6
SCNM1-205ENST00000471039 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.77■□□□□ 0.6
SCNM1-205ENST00000471039 SYNMO15061 1565 aa18.76■□□□□ 0.59
SCNM1-205ENST00000471039 SPHKAPQ2M3C7 1700 aa18.75■□□□□ 0.59
SCNM1-205ENST00000471039 RPRD2Q5VT52 1461 aaKnown RBP18.75■□□□□ 0.59
SCNM1-205ENST00000471039 STRCQ7RTU9 1775 aa18.74■□□□□ 0.59
SCNM1-205ENST00000471039 TNRQ92752 1358 aa18.74■□□□□ 0.59
SCNM1-205ENST00000471039 POLR1AO95602 1720 aaPredicted RBP18.74■□□□□ 0.59
SCNM1-205ENST00000471039 UBR1Q8IWV7 1749 aa18.74■□□□□ 0.59
SCNM1-205ENST00000471039 A2ML1A8K2U0 1454 aa18.73■□□□□ 0.59
SCNM1-205ENST00000471039 KDM5AP29375 1690 aaKnown RBP18.73■□□□□ 0.59
SCNM1-205ENST00000471039 NLRP1Q9C000 1473 aa18.72■□□□□ 0.59
SCNM1-205ENST00000471039 PIK3C2BO00750 1634 aa18.72■□□□□ 0.59
SCNM1-205ENST00000471039 FBXO31Q5XUX0 539 aaPredicted RBP18.7■□□□□ 0.58
SCNM1-205ENST00000471039 MYO5BQ9ULV0 1848 aa18.7■□□□□ 0.58
SCNM1-205ENST00000471039 NUP155O75694 1391 aa18.68■□□□□ 0.58
SCNM1-205ENST00000471039 NOS1P29475 1434 aa18.68■□□□□ 0.58
SCNM1-205ENST00000471039 UGGT1Q9NYU2 1555 aa18.68■□□□□ 0.58
SCNM1-205ENST00000471039 PLA2R1Q13018 1463 aa18.65■□□□□ 0.58
SCNM1-205ENST00000471039 ADGRB3O60242 1522 aa18.65■□□□□ 0.58
SCNM1-205ENST00000471039 HSPA2P54652 639 aa18.65■□□□□ 0.58
SCNM1-205ENST00000471039 SETD5Q9C0A6 1442 aa18.65■□□□□ 0.58
SCNM1-205ENST00000471039 TRPM2O94759 1503 aa18.62■□□□□ 0.57
SCNM1-205ENST00000471039 NEURL4Q96JN8 1562 aa18.62■□□□□ 0.57
SCNM1-205ENST00000471039 CLTCL1P53675 1640 aa18.61■□□□□ 0.57
SCNM1-205ENST00000471039 RAB3GAP2Q9H2M9 1393 aa18.61■□□□□ 0.57
SCNM1-205ENST00000471039 TMEM131LA2VDJ0 1609 aa18.6■□□□□ 0.57
SCNM1-205ENST00000471039 KIF1BO60333 1816 aa18.58■□□□□ 0.56
SCNM1-205ENST00000471039 SLIT1O75093 1534 aa18.57■□□□□ 0.56
SCNM1-205ENST00000471039 IQGAP1P46940 1657 aa18.56■□□□□ 0.56
SCNM1-205ENST00000471039 PTPRTO14522 1441 aa18.56■□□□□ 0.56
SCNM1-205ENST00000471039 ARHGAP23Q9P227 1491 aa18.55■□□□□ 0.56
SCNM1-205ENST00000471039 TRIM52Q96A61 297 aa18.55■□□□□ 0.56
SCNM1-205ENST00000471039 ACIN1Q9UKV3 1341 aaKnown RBP18.49■□□□□ 0.55
SCNM1-205ENST00000471039 IDI1Q13907 227 aa18.49■□□□□ 0.55
SCNM1-205ENST00000471039 SLC4A1APQ9BWU0 796 aaKnown RBP18.49■□□□□ 0.55
SCNM1-205ENST00000471039 SLC52A1Q9NWF4 448 aa18.49■□□□□ 0.55
SCNM1-205ENST00000471039 SCAF11Q99590 1463 aaKnown RBP18.49■□□□□ 0.55
SCNM1-205ENST00000471039 MED14O60244 1454 aa18.48■□□□□ 0.55
SCNM1-205ENST00000471039 PKD2Q13563 968 aa18.48■□□□□ 0.55
SCNM1-205ENST00000471039 THEMISQ8N1K5 641 aaPredicted RBP18.47■□□□□ 0.55
SCNM1-205ENST00000471039 IFT172Q9UG01 1749 aa18.46■□□□□ 0.55
SCNM1-205ENST00000471039 TMEM2Q9UHN6 1383 aa18.45■□□□□ 0.54
SCNM1-205ENST00000471039 ZFYVE9O95405 1425 aa18.45■□□□□ 0.54
SCNM1-205ENST00000471039 NCKAP5LQ9HCH0 1330 aa18.45■□□□□ 0.54
SCNM1-205ENST00000471039 PPLO60437 1756 aa18.45■□□□□ 0.54
SCNM1-205ENST00000471039 MPHOSPH9Q99550 1183 aa18.44■□□□□ 0.54
SCNM1-205ENST00000471039 NPHP4O75161 1426 aaPredicted RBP18.43■□□□□ 0.54
SCNM1-205ENST00000471039 NEXMIFQ5QGS0 1516 aa18.43■□□□□ 0.54
SCNM1-205ENST00000471039 STAG3Q9UJ98 1225 aa18.42■□□□□ 0.54
SCNM1-205ENST00000471039 HRCP23327 699 aa18.41■□□□□ 0.54
SCNM1-205ENST00000471039 TRIM26Q12899 539 aaPredicted RBP18.41■□□□□ 0.54
SCNM1-205ENST00000471039 FOXD1Q16676 465 aa18.41■□□□□ 0.54
SCNM1-205ENST00000471039 RIMS2Q9UQ26 1411 aa18.4■□□□□ 0.54
SCNM1-205ENST00000471039 DMRT2Q9Y5R5 561 aa18.4■□□□□ 0.54
SCNM1-205ENST00000471039 STRCP1A6NGW2 1772 aa18.4■□□□□ 0.54
SCNM1-205ENST00000471039 ANKLE2Q86XL3 938 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms