RNA–Protein interactions for RNA: ENST00000470942.1

HDAC6-218, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-218ENST00000470942 WASHC2CQ9Y4E1 1318 aa24.22■■□□□ 1.47
HDAC6-218ENST00000470942 RRP7BPQ9NSQ0 103 aa24.22■■□□□ 1.47
HDAC6-218ENST00000470942 DUOX2Q9NRD8 1548 aa24.21■■□□□ 1.47
HDAC6-218ENST00000470942 NPATQ14207 1427 aa24.21■■□□□ 1.47
HDAC6-218ENST00000470942 EIF2AK4Q9P2K8 1649 aaKnown RBP24.21■■□□□ 1.47
HDAC6-218ENST00000470942 KIF15Q9NS87 1388 aa24.2■■□□□ 1.46
HDAC6-218ENST00000470942 KDM5DQ9BY66 1539 aa24.2■■□□□ 1.46
HDAC6-218ENST00000470942 RNF17Q9BXT8 1623 aaKnown RBP24.18■■□□□ 1.46
HDAC6-218ENST00000470942 PTPRKQ15262 1439 aa24.18■■□□□ 1.46
HDAC6-218ENST00000470942 FAM135AQ9P2D6 1515 aa24.17■■□□□ 1.46
HDAC6-218ENST00000470942 ANKRD30AQ9BXX3 1397 aa24.16■■□□□ 1.46
HDAC6-218ENST00000470942 ERBINQ96RT1 1412 aa24.12■■□□□ 1.45
HDAC6-218ENST00000470942 MYO3AQ8NEV4 1616 aa24.11■■□□□ 1.45
HDAC6-218ENST00000470942 FBXO31Q5XUX0 539 aaPredicted RBP24.11■■□□□ 1.45
HDAC6-218ENST00000470942 ZC3H13Q5T200 1668 aaKnown RBP24.1■■□□□ 1.45
HDAC6-218ENST00000470942 STRCQ7RTU9 1775 aa24.1■■□□□ 1.45
HDAC6-218ENST00000470942 MROH1Q8NDA8 1641 aa24.1■■□□□ 1.45
HDAC6-218ENST00000470942 NCOA1Q15788 1441 aa24.1■■□□□ 1.45
HDAC6-218ENST00000470942 PZPP20742 1482 aa24.09■■□□□ 1.45
HDAC6-218ENST00000470942 CEP152O94986 1710 aa24.09■■□□□ 1.45
HDAC6-218ENST00000470942 ABCC3O15438 1527 aa24.09■■□□□ 1.45
HDAC6-218ENST00000470942 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.08■■□□□ 1.45
HDAC6-218ENST00000470942 ADGRL2O95490 1459 aa24.07■■□□□ 1.44
HDAC6-218ENST00000470942 ZNF142P52746 1687 aaPredicted RBP24.06■■□□□ 1.44
HDAC6-218ENST00000470942 TNRQ92752 1358 aa24.05■■□□□ 1.44
HDAC6-218ENST00000470942 CEP170BQ9Y4F5 1589 aaPredicted RBP24.05■■□□□ 1.44
HDAC6-218ENST00000470942 DMRT2Q9Y5R5 561 aa24.05■■□□□ 1.44
HDAC6-218ENST00000470942 CFAP65Q6ZU64 1925 aaKnown RBP24.05■■□□□ 1.44
HDAC6-218ENST00000470942 CAMSAP1Q5T5Y3 1602 aa24.04■■□□□ 1.44
HDAC6-218ENST00000470942 ITGAEP38570 1179 aa24.03■■□□□ 1.44
HDAC6-218ENST00000470942 KANK1Q14678 1352 aa24.03■■□□□ 1.44
HDAC6-218ENST00000470942 PRDM15P57071 1507 aaPredicted RBP24.02■■□□□ 1.44
HDAC6-218ENST00000470942 DEPDC5O75140 1603 aa24.02■■□□□ 1.44
HDAC6-218ENST00000470942 A2ML1A8K2U0 1454 aa24■■□□□ 1.43
HDAC6-218ENST00000470942 ANKRD50Q9ULJ7 1429 aa23.98■■□□□ 1.43
HDAC6-218ENST00000470942 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.97■■□□□ 1.43
HDAC6-218ENST00000470942 NCKAP5LQ9HCH0 1330 aa23.96■■□□□ 1.43
HDAC6-218ENST00000470942 SPATA31D1Q6ZQQ2 1576 aa23.95■■□□□ 1.42
HDAC6-218ENST00000470942 ERVK-7P63135 1459 aa23.94■■□□□ 1.42
HDAC6-218ENST00000470942 PTPRTO14522 1441 aa23.94■■□□□ 1.42
HDAC6-218ENST00000470942 ILDR1Q86SU0 546 aaPredicted RBP23.94■■□□□ 1.42
HDAC6-218ENST00000470942 NLRP1Q9C000 1473 aa23.94■■□□□ 1.42
HDAC6-218ENST00000470942 ROCK1Q13464 1354 aa23.93■■□□□ 1.42
HDAC6-218ENST00000470942 PLA2R1Q13018 1463 aa23.93■■□□□ 1.42
HDAC6-218ENST00000470942 ARHGAP31Q2M1Z3 1444 aa23.92■■□□□ 1.42
HDAC6-218ENST00000470942 PKD2Q13563 968 aa23.91■■□□□ 1.42
HDAC6-218ENST00000470942 VWDEQ8N2E2 1590 aa23.91■■□□□ 1.42
HDAC6-218ENST00000470942 RRBP1Q9P2E9 1410 aaKnown RBP23.9■■□□□ 1.42
HDAC6-218ENST00000470942 THEMISQ8N1K5 641 aaPredicted RBP23.89■■□□□ 1.41
HDAC6-218ENST00000470942 UGGT1Q9NYU2 1555 aa23.89■■□□□ 1.41
HDAC6-218ENST00000470942 LMTK2Q8IWU2 1503 aa23.89■■□□□ 1.41
HDAC6-218ENST00000470942 CERKQ8TCT0 537 aa23.85■■□□□ 1.41
HDAC6-218ENST00000470942 POLR1AO95602 1720 aaPredicted RBP23.84■■□□□ 1.41
HDAC6-218ENST00000470942 UNC13BO14795 1591 aa23.83■■□□□ 1.41
HDAC6-218ENST00000470942 EFCAB6Q5THR3 1501 aa23.83■■□□□ 1.41
HDAC6-218ENST00000470942 ANKLE2Q86XL3 938 aa23.82■■□□□ 1.4
HDAC6-218ENST00000470942 FBXO41Q8TF61 875 aa23.82■■□□□ 1.4
HDAC6-218ENST00000470942 UBR1Q8IWV7 1749 aa23.8■■□□□ 1.4
HDAC6-218ENST00000470942 TET3O43151 1660 aa23.79■■□□□ 1.4
HDAC6-218ENST00000470942 GCC2Q8IWJ2 1684 aa23.78■■□□□ 1.4
HDAC6-218ENST00000470942 STAG3Q9UJ98 1225 aa23.77■■□□□ 1.4
HDAC6-218ENST00000470942 PIK3C2BO00750 1634 aa23.77■■□□□ 1.4
HDAC6-218ENST00000470942 NEURL4Q96JN8 1562 aa23.76■■□□□ 1.39
HDAC6-218ENST00000470942 NUP155O75694 1391 aa23.76■■□□□ 1.39
HDAC6-218ENST00000470942 SYNMO15061 1565 aa23.74■■□□□ 1.39
HDAC6-218ENST00000470942 IQGAP3Q86VI3 1631 aa23.74■■□□□ 1.39
HDAC6-218ENST00000470942 IDI1Q13907 227 aa23.74■■□□□ 1.39
HDAC6-218ENST00000470942 ZNF335Q9H4Z2 1342 aaPredicted RBP23.74■■□□□ 1.39
HDAC6-218ENST00000470942 NOS1P29475 1434 aa23.74■■□□□ 1.39
HDAC6-218ENST00000470942 RPRD2Q5VT52 1461 aaKnown RBP23.74■■□□□ 1.39
HDAC6-218ENST00000470942 LTBP4Q8N2S1 1624 aa23.73■■□□□ 1.39
HDAC6-218ENST00000470942 NPHP4O75161 1426 aaPredicted RBP23.71■■□□□ 1.39
HDAC6-218ENST00000470942 E9PCH4 1651 aa23.7■■□□□ 1.39
HDAC6-218ENST00000470942 SLC52A1Q9NWF4 448 aa23.7■■□□□ 1.38
HDAC6-218ENST00000470942 NAIPQ13075 1403 aa23.69■■□□□ 1.38
HDAC6-218ENST00000470942 IQGAP1P46940 1657 aa23.69■■□□□ 1.38
HDAC6-218ENST00000470942 MED14O60244 1454 aa23.68■■□□□ 1.38
HDAC6-218ENST00000470942 TXNDC2Q86VQ3 553 aa23.68■■□□□ 1.38
HDAC6-218ENST00000470942 KDM5AP29375 1690 aaKnown RBP23.67■■□□□ 1.38
HDAC6-218ENST00000470942 EID1Q9Y6B2 187 aa23.67■■□□□ 1.38
HDAC6-218ENST00000470942 SLIT1O75093 1534 aa23.67■■□□□ 1.38
HDAC6-218ENST00000470942 SCAF11Q99590 1463 aaKnown RBP23.66■■□□□ 1.38
HDAC6-218ENST00000470942 ARHGAP23Q9P227 1491 aa23.65■■□□□ 1.38
HDAC6-218ENST00000470942 LTKP29376 864 aa23.65■■□□□ 1.38
HDAC6-218ENST00000470942 TMEM2Q9UHN6 1383 aa23.64■■□□□ 1.37
HDAC6-218ENST00000470942 ADGRB3O60242 1522 aa23.64■■□□□ 1.37
HDAC6-218ENST00000470942 HFM1A2PYH4 1435 aa23.63■■□□□ 1.37
HDAC6-218ENST00000470942 MYO5BQ9ULV0 1848 aa23.61■■□□□ 1.37
HDAC6-218ENST00000470942 TRIM52Q96A61 297 aa23.61■■□□□ 1.37
HDAC6-218ENST00000470942 CHGAP10645 457 aaKnown RBP23.6■■□□□ 1.37
HDAC6-218ENST00000470942 IQSEC2Q5JU85 1478 aa23.6■■□□□ 1.37
HDAC6-218ENST00000470942 SPHKAPQ2M3C7 1700 aa23.56■■□□□ 1.36
HDAC6-218ENST00000470942 TMEM131LA2VDJ0 1609 aa23.55■■□□□ 1.36
HDAC6-218ENST00000470942 CPS1P31327 1500 aa23.55■■□□□ 1.36
HDAC6-218ENST00000470942 BCANQ96GW7 911 aa23.53■■□□□ 1.36
HDAC6-218ENST00000470942 HDGFP51858 240 aaKnown RBP23.52■■□□□ 1.36
HDAC6-218ENST00000470942 STRCP1A6NGW2 1772 aa23.51■■□□□ 1.35
HDAC6-218ENST00000470942 RIMS2Q9UQ26 1411 aa23.5■■□□□ 1.35
HDAC6-218ENST00000470942 UBAP1LF5GYI3 381 aa23.5■■□□□ 1.35
HDAC6-218ENST00000470942 PPP1R15AO75807 674 aaPredicted RBP23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms