RNA–Protein interactions for RNA: ENST00000470880.6

CHL1-211, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 3

Gene CHL1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-211ENST00000470880 PHLDB1Q86UU1 1377 aa10.01□□□□□ -0.81
CHL1-211ENST00000470880 PREX2Q70Z35 1606 aa10□□□□□ -0.81
CHL1-211ENST00000470880 UHRF1BP1Q6BDS2 1440 aa10□□□□□ -0.81
CHL1-211ENST00000470880 MYOM3Q5VTT5 1437 aa9.99□□□□□ -0.81
CHL1-211ENST00000470880 AKNAQ7Z591 1439 aa9.99□□□□□ -0.81
CHL1-211ENST00000470880 GPATCH8Q9UKJ3 1502 aaKnown RBP9.99□□□□□ -0.81
CHL1-211ENST00000470880 PLEKHH2Q8IVE3 1493 aa9.98□□□□□ -0.81
CHL1-211ENST00000470880 SCAPERQ9BY12 1400 aa9.97□□□□□ -0.81
CHL1-211ENST00000470880 DENND4BO75064 1496 aaPredicted RBP9.97□□□□□ -0.81
CHL1-211ENST00000470880 CDC42BPAQ5VT25 1732 aa9.96□□□□□ -0.81
CHL1-211ENST00000470880 FAM50AQ14320 339 aaKnown RBP9.96□□□□□ -0.82
CHL1-211ENST00000470880 NCOA1Q15788 1441 aa9.96□□□□□ -0.82
CHL1-211ENST00000470880 MIA2Q96PC5 1412 aa9.96□□□□□ -0.82
CHL1-211ENST00000470880 LRRC7Q96NW7 1537 aa9.96□□□□□ -0.82
CHL1-211ENST00000470880 FGD6Q6ZV73 1430 aa9.95□□□□□ -0.82
CHL1-211ENST00000470880 CAMSAP2Q08AD1 1489 aa9.95□□□□□ -0.82
CHL1-211ENST00000470880 FER1L4A9Z1Z3 1794 aa9.95□□□□□ -0.82
CHL1-211ENST00000470880 ABCC1P33527 1531 aa9.94□□□□□ -0.82
CHL1-211ENST00000470880 SYCP2Q9BX26 1530 aa9.94□□□□□ -0.82
CHL1-211ENST00000470880 ZNF518AQ6AHZ1 1483 aa9.94□□□□□ -0.82
CHL1-211ENST00000470880 CDC42BPBQ9Y5S2 1711 aa9.93□□□□□ -0.82
CHL1-211ENST00000470880 SAMD9LQ8IVG5 1584 aa9.93□□□□□ -0.82
CHL1-211ENST00000470880 POGZQ7Z3K3 1410 aa9.93□□□□□ -0.82
CHL1-211ENST00000470880 PTPRKQ15262 1439 aa9.92□□□□□ -0.82
CHL1-211ENST00000470880 RAPGEF3O95398 923 aa9.92□□□□□ -0.82
CHL1-211ENST00000470880 TSPY4P0CV99 314 aa9.92□□□□□ -0.82
CHL1-211ENST00000470880 TSPY10P0CW01 314 aa9.92□□□□□ -0.82
CHL1-211ENST00000470880 HNRNPMP52272 730 aaKnown RBP eCLIP9.92□□□□□ -0.82
CHL1-211ENST00000470880 PTPN23Q9H3S7 1636 aa9.92□□□□□ -0.82
CHL1-211ENST00000470880 KIAA1107Q9UPP5 1409 aa9.91□□□□□ -0.82
CHL1-211ENST00000470880 ZNF644Q9H582 1327 aaPredicted RBP9.91□□□□□ -0.82
CHL1-211ENST00000470880 CEBPAP49715 358 aaPredicted RBP9.91□□□□□ -0.82
CHL1-211ENST00000470880 COL13A1Q5TAT6 717 aaPredicted RBP9.91□□□□□ -0.82
CHL1-211ENST00000470880 RSPH4AQ5TD94 716 aa9.91□□□□□ -0.82
CHL1-211ENST00000470880 ZBTB12Q9Y330 459 aaPredicted RBP9.91□□□□□ -0.82
CHL1-211ENST00000470880 CCDC141Q6ZP82 1450 aa9.91□□□□□ -0.82
CHL1-211ENST00000470880 SPAG9O60271 1321 aaKnown RBP9.9□□□□□ -0.82
CHL1-211ENST00000470880 ITGAEP38570 1179 aa9.89□□□□□ -0.83
CHL1-211ENST00000470880 AFAP1Q8N556 730 aa9.89□□□□□ -0.83
CHL1-211ENST00000470880 TRAPPC8Q9Y2L5 1435 aa9.89□□□□□ -0.83
CHL1-211ENST00000470880 NHSL1Q5SYE7 1610 aa9.89□□□□□ -0.83
CHL1-211ENST00000470880 ZFYVE16Q7Z3T8 1539 aa9.88□□□□□ -0.83
CHL1-211ENST00000470880 TCOF1Q13428 1488 aaKnown RBP9.88□□□□□ -0.83
CHL1-211ENST00000470880 MAGI2Q86UL8 1455 aa9.87□□□□□ -0.83
CHL1-211ENST00000470880 CDK12Q9NYV4 1490 aaPredicted RBP9.87□□□□□ -0.83
CHL1-211ENST00000470880 RXRBP28702 533 aa9.87□□□□□ -0.83
CHL1-211ENST00000470880 TNS4Q8IZW8 715 aa9.87□□□□□ -0.83
CHL1-211ENST00000470880 ARHGEF5Q12774 1597 aa9.87□□□□□ -0.83
CHL1-211ENST00000470880 ZMYM4Q5VZL5 1548 aa9.87□□□□□ -0.83
CHL1-211ENST00000470880 ARHGEF12Q9NZN5 1544 aa9.87□□□□□ -0.83
CHL1-211ENST00000470880 FRMPD1Q5SYB0 1578 aa9.86□□□□□ -0.83
CHL1-211ENST00000470880 NCKAP5LQ9HCH0 1330 aa9.85□□□□□ -0.83
CHL1-211ENST00000470880 RICTORQ6R327 1708 aa9.85□□□□□ -0.83
CHL1-211ENST00000470880 KDM5CP41229 1560 aa9.85□□□□□ -0.83
CHL1-211ENST00000470880 DAPK1P53355 1430 aa9.85□□□□□ -0.83
CHL1-211ENST00000470880 C9orf84Q5VXU9 1444 aa9.85□□□□□ -0.83
CHL1-211ENST00000470880 ATP7AQ04656 1500 aa9.85□□□□□ -0.83
CHL1-211ENST00000470880 ARHGEF40Q8TER5 1519 aa9.85□□□□□ -0.83
CHL1-211ENST00000470880 MBD5Q9P267 1494 aa9.85□□□□□ -0.83
CHL1-211ENST00000470880 RRBP1Q9P2E9 1410 aaKnown RBP9.84□□□□□ -0.83
CHL1-211ENST00000470880 NUTM2BA6NNL0 878 aaPredicted RBP9.84□□□□□ -0.83
CHL1-211ENST00000470880 NUTM2EB1AL46 878 aaPredicted RBP9.84□□□□□ -0.83
CHL1-211ENST00000470880 NUTM2DQ5VT03 806 aaPredicted RBP9.84□□□□□ -0.83
CHL1-211ENST00000470880 NUTM2AQ8IVF1 878 aaPredicted RBP9.84□□□□□ -0.83
CHL1-211ENST00000470880 CHIC2Q9UKJ5 165 aa9.84□□□□□ -0.83
CHL1-211ENST00000470880 DNMT1P26358 1616 aaKnown RBP9.84□□□□□ -0.83
CHL1-211ENST00000470880 MLH3Q9UHC1 1453 aa9.84□□□□□ -0.83
CHL1-211ENST00000470880 SHANK2Q9UPX8 1470 aa9.84□□□□□ -0.83
CHL1-211ENST00000470880 MLECQ14165 292 aa9.83□□□□□ -0.84
CHL1-211ENST00000470880 ANKRD30AQ9BXX3 1397 aa9.83□□□□□ -0.84
CHL1-211ENST00000470880 RTEL1-TNFRSF6BF6WH68 1400 aa9.82□□□□□ -0.84
CHL1-211ENST00000470880 ABCC5O15440 1437 aa9.82□□□□□ -0.84
CHL1-211ENST00000470880 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.82□□□□□ -0.84
CHL1-211ENST00000470880 SETD1BQ9UPS6 1966 aaKnown RBP9.81□□□□□ -0.84
CHL1-211ENST00000470880 INO80Q9ULG1 1556 aaPredicted RBP9.81□□□□□ -0.84
CHL1-211ENST00000470880 ATP10AO60312 1499 aa9.81□□□□□ -0.84
CHL1-211ENST00000470880 ZNF772Q68DY9 489 aaPredicted RBP9.81□□□□□ -0.84
CHL1-211ENST00000470880 ESF1Q9H501 851 aaKnown RBP9.81□□□□□ -0.84
CHL1-211ENST00000470880 CAMSAP1Q5T5Y3 1602 aa9.81□□□□□ -0.84
CHL1-211ENST00000470880 CPS1P31327 1500 aa9.81□□□□□ -0.84
CHL1-211ENST00000470880 CROCC2H7BZ55 1655 aa9.8□□□□□ -0.84
CHL1-211ENST00000470880 KIF15Q9NS87 1388 aa9.8□□□□□ -0.84
CHL1-211ENST00000470880 SIGLEC1Q9BZZ2 1709 aa9.8□□□□□ -0.84
CHL1-211ENST00000470880 ABCA6Q8N139 1617 aa9.8□□□□□ -0.84
CHL1-211ENST00000470880 DIP2CQ9Y2E4 1556 aa9.8□□□□□ -0.84
CHL1-211ENST00000470880 MAST1Q9Y2H9 1570 aa9.8□□□□□ -0.84
CHL1-211ENST00000470880 A2MP01023 1474 aa9.79□□□□□ -0.84
CHL1-211ENST00000470880 RRP7BPQ9NSQ0 103 aa9.79□□□□□ -0.84
CHL1-211ENST00000470880 RGS12O14924 1447 aa9.78□□□□□ -0.84
CHL1-211ENST00000470880 PLXNC1O60486 1568 aa9.78□□□□□ -0.84
CHL1-211ENST00000470880 KIDINS220Q9ULH0 1771 aa9.78□□□□□ -0.84
CHL1-211ENST00000470880 ADGBQ8N7X0 1667 aa9.77□□□□□ -0.84
CHL1-211ENST00000470880 HRCP23327 699 aa9.77□□□□□ -0.85
CHL1-211ENST00000470880 DUOX2Q9NRD8 1548 aa9.77□□□□□ -0.85
CHL1-211ENST00000470880 DHX29Q7Z478 1369 aaKnown RBP9.76□□□□□ -0.85
CHL1-211ENST00000470880 GIGYF1O75420 1035 aaPredicted RBP9.76□□□□□ -0.85
CHL1-211ENST00000470880 FBXO3Q9UK99 471 aa9.76□□□□□ -0.85
CHL1-211ENST00000470880 ADGRL2O95490 1459 aa9.76□□□□□ -0.85
CHL1-211ENST00000470880 ROCK1Q13464 1354 aa9.75□□□□□ -0.85
CHL1-211ENST00000470880 ATAD2Q6PL18 1390 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms