RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 YEATS2Q9ULM3 1422 aa14.22□□□□□ -0.13
CCM2-204ENST00000470837 GGT6Q6P531 493 aa14.21□□□□□ -0.13
CCM2-204ENST00000470837 PKD2Q13563 968 aa14.2□□□□□ -0.14
CCM2-204ENST00000470837 DIP2CQ9Y2E4 1556 aa14.19□□□□□ -0.14
CCM2-204ENST00000470837 ABCA6Q8N139 1617 aa14.19□□□□□ -0.14
CCM2-204ENST00000470837 EIF2AK4Q9P2K8 1649 aaKnown RBP14.19□□□□□ -0.14
CCM2-204ENST00000470837 ARID4BQ4LE39 1312 aaPredicted RBP14.18□□□□□ -0.14
CCM2-204ENST00000470837 KDM5DQ9BY66 1539 aa14.17□□□□□ -0.14
CCM2-204ENST00000470837 WASHC2CQ9Y4E1 1318 aa14.16□□□□□ -0.14
CCM2-204ENST00000470837 FAM135AQ9P2D6 1515 aa14.16□□□□□ -0.14
CCM2-204ENST00000470837 NEUROD1Q13562 356 aa14.16□□□□□ -0.14
CCM2-204ENST00000470837 AEBP2Q6ZN18 517 aaPredicted RBP14.16□□□□□ -0.14
CCM2-204ENST00000470837 ESF1Q9H501 851 aaKnown RBP14.16□□□□□ -0.14
CCM2-204ENST00000470837 PZPP20742 1482 aa14.16□□□□□ -0.14
CCM2-204ENST00000470837 UNC13BO14795 1591 aa14.16□□□□□ -0.14
CCM2-204ENST00000470837 ARHGEF40Q8TER5 1519 aa14.15□□□□□ -0.14
CCM2-204ENST00000470837 FOXD1Q16676 465 aa14.14□□□□□ -0.15
CCM2-204ENST00000470837 PPP6R1Q9UPN7 881 aa14.14□□□□□ -0.15
CCM2-204ENST00000470837 REREQ9P2R6 1566 aa14.13□□□□□ -0.15
CCM2-204ENST00000470837 AGLP35573 1532 aa14.11□□□□□ -0.15
CCM2-204ENST00000470837 PRDM15P57071 1507 aaPredicted RBP14.11□□□□□ -0.15
CCM2-204ENST00000470837 MLECQ14165 292 aa14.11□□□□□ -0.15
CCM2-204ENST00000470837 TIMELESSQ9UNS1 1208 aa14.11□□□□□ -0.15
CCM2-204ENST00000470837 IQGAP3Q86VI3 1631 aa14.11□□□□□ -0.15
CCM2-204ENST00000470837 SIN3AQ96ST3 1273 aa14.1□□□□□ -0.15
CCM2-204ENST00000470837 DEPDC5O75140 1603 aa14.1□□□□□ -0.15
CCM2-204ENST00000470837 TONSLQ96HA7 1378 aa14.09□□□□□ -0.15
CCM2-204ENST00000470837 ANKRD30BQ9BXX2 1392 aa14.09□□□□□ -0.15
CCM2-204ENST00000470837 RNF17Q9BXT8 1623 aaKnown RBP14.09□□□□□ -0.15
CCM2-204ENST00000470837 BCORL1Q5H9F3 1711 aa14.08□□□□□ -0.16
CCM2-204ENST00000470837 CCDC144AA2RUR9 1427 aa14.07□□□□□ -0.16
CCM2-204ENST00000470837 LMTK2Q8IWU2 1503 aa14.06□□□□□ -0.16
CCM2-204ENST00000470837 VWDEQ8N2E2 1590 aa14.05□□□□□ -0.16
CCM2-204ENST00000470837 MROH1Q8NDA8 1641 aa14.04□□□□□ -0.16
CCM2-204ENST00000470837 RPRD2Q5VT52 1461 aaKnown RBP14.04□□□□□ -0.16
CCM2-204ENST00000470837 ABCC3O15438 1527 aa14.04□□□□□ -0.16
CCM2-204ENST00000470837 TET3O43151 1660 aa14.04□□□□□ -0.16
CCM2-204ENST00000470837 EFCAB6Q5THR3 1501 aa14.02□□□□□ -0.16
CCM2-204ENST00000470837 ZC3H13Q5T200 1668 aaKnown RBP14.01□□□□□ -0.17
CCM2-204ENST00000470837 CNTLNQ9NXG0 1405 aa14.01□□□□□ -0.17
CCM2-204ENST00000470837 ARHGAP31Q2M1Z3 1444 aa14□□□□□ -0.17
CCM2-204ENST00000470837 NPATQ14207 1427 aa13.99□□□□□ -0.17
CCM2-204ENST00000470837 PTPRTO14522 1441 aa13.98□□□□□ -0.17
CCM2-204ENST00000470837 CEP152O94986 1710 aa13.97□□□□□ -0.17
CCM2-204ENST00000470837 E9PCH4 1651 aa13.97□□□□□ -0.17
CCM2-204ENST00000470837 TRPM2O94759 1503 aa13.96□□□□□ -0.17
CCM2-204ENST00000470837 PLA2R1Q13018 1463 aa13.96□□□□□ -0.17
CCM2-204ENST00000470837 CHGAP10645 457 aaKnown RBP13.96□□□□□ -0.17
CCM2-204ENST00000470837 RGL3Q3MIN7 710 aa13.96□□□□□ -0.17
CCM2-204ENST00000470837 L3MBTL2Q969R5 705 aa13.96□□□□□ -0.17
CCM2-204ENST00000470837 SLC52A1Q9NWF4 448 aa13.96□□□□□ -0.17
CCM2-204ENST00000470837 CAMSAP1Q5T5Y3 1602 aa13.96□□□□□ -0.17
CCM2-204ENST00000470837 ZMYM3Q14202 1370 aa13.96□□□□□ -0.18
CCM2-204ENST00000470837 PPP1R15AO75807 674 aaPredicted RBP13.94□□□□□ -0.18
CCM2-204ENST00000470837 STAG3Q9UJ98 1225 aa13.94□□□□□ -0.18
CCM2-204ENST00000470837 ZNF326Q5BKZ1 582 aaKnown RBP13.93□□□□□ -0.18
CCM2-204ENST00000470837 SIGLEC1Q9BZZ2 1709 aa13.93□□□□□ -0.18
CCM2-204ENST00000470837 NOS1P29475 1434 aa13.92□□□□□ -0.18
CCM2-204ENST00000470837 FBXO31Q5XUX0 539 aaPredicted RBP13.92□□□□□ -0.18
CCM2-204ENST00000470837 DCAF11Q8TEB1 546 aa13.92□□□□□ -0.18
CCM2-204ENST00000470837 SPHKAPQ2M3C7 1700 aa13.92□□□□□ -0.18
CCM2-204ENST00000470837 CLTCQ00610 1675 aaKnown RBP13.91□□□□□ -0.18
CCM2-204ENST00000470837 PLPPR3Q6T4P5 718 aa13.91□□□□□ -0.18
CCM2-204ENST00000470837 STAC3Q96MF2 364 aa13.91□□□□□ -0.18
CCM2-204ENST00000470837 KDM2AQ9Y2K7 1162 aa13.91□□□□□ -0.18
CCM2-204ENST00000470837 ERVK-7P63135 1459 aa13.9□□□□□ -0.18
CCM2-204ENST00000470837 TNRQ92752 1358 aa13.88□□□□□ -0.19
CCM2-204ENST00000470837 IDI1Q13907 227 aa13.88□□□□□ -0.19
CCM2-204ENST00000470837 RPGRIP1LQ68CZ1 1315 aa13.87□□□□□ -0.19
CCM2-204ENST00000470837 CLTCL1P53675 1640 aa13.86□□□□□ -0.19
CCM2-204ENST00000470837 CEBPAP49715 358 aaPredicted RBP13.86□□□□□ -0.19
CCM2-204ENST00000470837 SPATA31E1Q6ZUB1 1445 aa13.86□□□□□ -0.19
CCM2-204ENST00000470837 MROH2AA6NES4 1674 aa13.85□□□□□ -0.19
CCM2-204ENST00000470837 UGGT1Q9NYU2 1555 aa13.85□□□□□ -0.19
CCM2-204ENST00000470837 PREX1Q8TCU6 1659 aa13.85□□□□□ -0.19
CCM2-204ENST00000470837 SPATA31D1Q6ZQQ2 1576 aa13.84□□□□□ -0.19
CCM2-204ENST00000470837 HDGFP51858 240 aaKnown RBP13.84□□□□□ -0.19
CCM2-204ENST00000470837 SYNMO15061 1565 aa13.83□□□□□ -0.19
CCM2-204ENST00000470837 NEURL4Q96JN8 1562 aa13.83□□□□□ -0.19
CCM2-204ENST00000470837 FER1L4A9Z1Z3 1794 aa13.83□□□□□ -0.19
CCM2-204ENST00000470837 VGFO15240 615 aaPredicted RBP13.82□□□□□ -0.2
CCM2-204ENST00000470837 MADDQ8WXG6 1647 aa13.81□□□□□ -0.2
CCM2-204ENST00000470837 UHRF1BP1Q6BDS2 1440 aa13.81□□□□□ -0.2
CCM2-204ENST00000470837 NLRP1Q9C000 1473 aa13.8□□□□□ -0.2
CCM2-204ENST00000470837 ADGRB3O60242 1522 aa13.8□□□□□ -0.2
CCM2-204ENST00000470837 NBPF8Q3BBV2 869 aa13.8□□□□□ -0.2
CCM2-204ENST00000470837 KIF1BO60333 1816 aa13.8□□□□□ -0.2
CCM2-204ENST00000470837 CFAP65Q6ZU64 1925 aaKnown RBP13.8□□□□□ -0.2
CCM2-204ENST00000470837 PIK3C2BO00750 1634 aa13.79□□□□□ -0.2
CCM2-204ENST00000470837 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.79□□□□□ -0.2
CCM2-204ENST00000470837 ADAMTSL3P82987 1691 aa13.79□□□□□ -0.2
CCM2-204ENST00000470837 ROCK2O75116 1388 aaKnown RBP13.78□□□□□ -0.2
CCM2-204ENST00000470837 PRAG1Q86YV5 1406 aa13.78□□□□□ -0.2
CCM2-204ENST00000470837 RIMS1Q86UR5 1692 aaKnown RBP13.78□□□□□ -0.2
CCM2-204ENST00000470837 ZNF316A6NFI3 1004 aaPredicted RBP13.77□□□□□ -0.21
CCM2-204ENST00000470837 EIF4G2P78344 907 aaKnown RBP eCLIP13.77□□□□□ -0.21
CCM2-204ENST00000470837 THEMISQ8N1K5 641 aaPredicted RBP13.77□□□□□ -0.21
CCM2-204ENST00000470837 CARD11Q9BXL7 1154 aa13.77□□□□□ -0.21
CCM2-204ENST00000470837 C3P01024 1663 aa13.76□□□□□ -0.21
CCM2-204ENST00000470837 MYOM2P54296 1465 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms