RNA–Protein interactions for RNA: ENST00000470724.5

NXF3-205, Transcript of nuclear RNA export factor 3, humanhuman

TSL 3

Gene NXF3, Length 607 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-205ENST00000470724 PTPRKQ15262 1439 aa14.58□□□□□ -0.08
NXF3-205ENST00000470724 ZMYM3Q14202 1370 aa14.57□□□□□ -0.08
NXF3-205ENST00000470724 KANK1Q14678 1352 aa14.57□□□□□ -0.08
NXF3-205ENST00000470724 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.57□□□□□ -0.08
NXF3-205ENST00000470724 ERBINQ96RT1 1412 aa14.57□□□□□ -0.08
NXF3-205ENST00000470724 ADGRL2O95490 1459 aa14.55□□□□□ -0.08
NXF3-205ENST00000470724 ANKRD50Q9ULJ7 1429 aa14.54□□□□□ -0.08
NXF3-205ENST00000470724 CLTCQ00610 1675 aaKnown RBP14.53□□□□□ -0.08
NXF3-205ENST00000470724 KDM5DQ9BY66 1539 aa14.52□□□□□ -0.08
NXF3-205ENST00000470724 ROCK1Q13464 1354 aa14.52□□□□□ -0.08
NXF3-205ENST00000470724 HSPA2P54652 639 aa14.52□□□□□ -0.09
NXF3-205ENST00000470724 UHRF1BP1Q6BDS2 1440 aa14.5□□□□□ -0.09
NXF3-205ENST00000470724 FBXO31Q5XUX0 539 aaPredicted RBP14.5□□□□□ -0.09
NXF3-205ENST00000470724 EIF2AK4Q9P2K8 1649 aaKnown RBP14.5□□□□□ -0.09
NXF3-205ENST00000470724 ABCC3O15438 1527 aa14.47□□□□□ -0.09
NXF3-205ENST00000470724 C3P01024 1663 aa14.47□□□□□ -0.09
NXF3-205ENST00000470724 TRIM52Q96A61 297 aa14.47□□□□□ -0.09
NXF3-205ENST00000470724 RNF17Q9BXT8 1623 aaKnown RBP14.47□□□□□ -0.09
NXF3-205ENST00000470724 TNRQ92752 1358 aa14.47□□□□□ -0.09
NXF3-205ENST00000470724 NPATQ14207 1427 aa14.45□□□□□ -0.1
NXF3-205ENST00000470724 MROH2AA6NES4 1674 aa14.45□□□□□ -0.1
NXF3-205ENST00000470724 FAM135AQ9P2D6 1515 aa14.45□□□□□ -0.1
NXF3-205ENST00000470724 NUP155O75694 1391 aa14.45□□□□□ -0.1
NXF3-205ENST00000470724 PZPP20742 1482 aa14.44□□□□□ -0.1
NXF3-205ENST00000470724 LMTK3Q96Q04 1460 aa14.44□□□□□ -0.1
NXF3-205ENST00000470724 PRDM15P57071 1507 aaPredicted RBP14.43□□□□□ -0.1
NXF3-205ENST00000470724 MROH1Q8NDA8 1641 aa14.43□□□□□ -0.1
NXF3-205ENST00000470724 NAIPQ13075 1403 aa14.41□□□□□ -0.1
NXF3-205ENST00000470724 STAG3Q9UJ98 1225 aa14.41□□□□□ -0.1
NXF3-205ENST00000470724 ZC3H13Q5T200 1668 aaKnown RBP14.41□□□□□ -0.1
NXF3-205ENST00000470724 CEP152O94986 1710 aa14.41□□□□□ -0.1
NXF3-205ENST00000470724 PREX1Q8TCU6 1659 aa14.4□□□□□ -0.1
NXF3-205ENST00000470724 CAMSAP1Q5T5Y3 1602 aa14.39□□□□□ -0.11
NXF3-205ENST00000470724 HFM1A2PYH4 1435 aa14.39□□□□□ -0.11
NXF3-205ENST00000470724 ERVK-7P63135 1459 aa14.38□□□□□ -0.11
NXF3-205ENST00000470724 DEPDC5O75140 1603 aa14.38□□□□□ -0.11
NXF3-205ENST00000470724 CHGAP10645 457 aaKnown RBP14.37□□□□□ -0.11
NXF3-205ENST00000470724 ARHGAP31Q2M1Z3 1444 aa14.36□□□□□ -0.11
NXF3-205ENST00000470724 MYO3AQ8NEV4 1616 aa14.36□□□□□ -0.11
NXF3-205ENST00000470724 LMTK2Q8IWU2 1503 aa14.36□□□□□ -0.11
NXF3-205ENST00000470724 UNC13BO14795 1591 aa14.35□□□□□ -0.11
NXF3-205ENST00000470724 THEMISQ8N1K5 641 aaPredicted RBP14.35□□□□□ -0.11
NXF3-205ENST00000470724 SLC4A1APQ9BWU0 796 aaKnown RBP14.35□□□□□ -0.11
NXF3-205ENST00000470724 A2ML1A8K2U0 1454 aa14.35□□□□□ -0.11
NXF3-205ENST00000470724 NCKAP5LQ9HCH0 1330 aa14.35□□□□□ -0.11
NXF3-205ENST00000470724 CEP170BQ9Y4F5 1589 aaPredicted RBP14.34□□□□□ -0.11
NXF3-205ENST00000470724 NLRP1Q9C000 1473 aa14.34□□□□□ -0.11
NXF3-205ENST00000470724 EFCAB6Q5THR3 1501 aa14.34□□□□□ -0.11
NXF3-205ENST00000470724 VWDEQ8N2E2 1590 aa14.34□□□□□ -0.11
NXF3-205ENST00000470724 SETD5Q9C0A6 1442 aa14.33□□□□□ -0.11
NXF3-205ENST00000470724 DMRT2Q9Y5R5 561 aa14.33□□□□□ -0.12
NXF3-205ENST00000470724 GCC2Q8IWJ2 1684 aa14.33□□□□□ -0.12
NXF3-205ENST00000470724 SPATA31D1Q6ZQQ2 1576 aa14.32□□□□□ -0.12
NXF3-205ENST00000470724 UGGT1Q9NYU2 1555 aa14.31□□□□□ -0.12
NXF3-205ENST00000470724 PKD2Q13563 968 aa14.31□□□□□ -0.12
NXF3-205ENST00000470724 IDI1Q13907 227 aa14.3□□□□□ -0.12
NXF3-205ENST00000470724 ANKLE2Q86XL3 938 aa14.3□□□□□ -0.12
NXF3-205ENST00000470724 TET3O43151 1660 aa14.3□□□□□ -0.12
NXF3-205ENST00000470724 SETD1BQ9UPS6 1966 aaKnown RBP14.29□□□□□ -0.12
NXF3-205ENST00000470724 BCANQ96GW7 911 aa14.29□□□□□ -0.12
NXF3-205ENST00000470724 SLC52A1Q9NWF4 448 aa14.29□□□□□ -0.12
NXF3-205ENST00000470724 RAB3GAP2Q9H2M9 1393 aa14.29□□□□□ -0.12
NXF3-205ENST00000470724 RPRD2Q5VT52 1461 aaKnown RBP14.29□□□□□ -0.12
NXF3-205ENST00000470724 IQGAP3Q86VI3 1631 aa14.29□□□□□ -0.12
NXF3-205ENST00000470724 FOXD1Q16676 465 aa14.28□□□□□ -0.12
NXF3-205ENST00000470724 SENP3Q9H4L4 574 aaPredicted RBP14.28□□□□□ -0.12
NXF3-205ENST00000470724 EID1Q9Y6B2 187 aa14.28□□□□□ -0.12
NXF3-205ENST00000470724 NOS1P29475 1434 aa14.27□□□□□ -0.12
NXF3-205ENST00000470724 CFAP65Q6ZU64 1925 aaKnown RBP14.26□□□□□ -0.13
NXF3-205ENST00000470724 PPP1R15AO75807 674 aaPredicted RBP14.26□□□□□ -0.13
NXF3-205ENST00000470724 ZNF326Q5BKZ1 582 aaKnown RBP14.26□□□□□ -0.13
NXF3-205ENST00000470724 TXNDC2Q86VQ3 553 aa14.26□□□□□ -0.13
NXF3-205ENST00000470724 MPHOSPH9Q99550 1183 aa14.26□□□□□ -0.13
NXF3-205ENST00000470724 ZNF142P52746 1687 aaPredicted RBP14.26□□□□□ -0.13
NXF3-205ENST00000470724 PLA2R1Q13018 1463 aa14.25□□□□□ -0.13
NXF3-205ENST00000470724 ACIN1Q9UKV3 1341 aaKnown RBP14.24□□□□□ -0.13
NXF3-205ENST00000470724 SYNMO15061 1565 aa14.24□□□□□ -0.13
NXF3-205ENST00000470724 E9PCH4 1651 aa14.23□□□□□ -0.13
NXF3-205ENST00000470724 TRIM26Q12899 539 aaPredicted RBP14.22□□□□□ -0.13
NXF3-205ENST00000470724 NUTM2DQ5VT03 806 aaPredicted RBP14.22□□□□□ -0.13
NXF3-205ENST00000470724 PIK3C2BO00750 1634 aa14.22□□□□□ -0.13
NXF3-205ENST00000470724 HDGFP51858 240 aaKnown RBP14.21□□□□□ -0.13
NXF3-205ENST00000470724 PTPRTO14522 1441 aa14.21□□□□□ -0.13
NXF3-205ENST00000470724 TMEM2Q9UHN6 1383 aa14.21□□□□□ -0.14
NXF3-205ENST00000470724 ADGRB3O60242 1522 aa14.2□□□□□ -0.14
NXF3-205ENST00000470724 LTKP29376 864 aa14.2□□□□□ -0.14
NXF3-205ENST00000470724 NPHP4O75161 1426 aaPredicted RBP14.2□□□□□ -0.14
NXF3-205ENST00000470724 SCAF11Q99590 1463 aaKnown RBP14.18□□□□□ -0.14
NXF3-205ENST00000470724 STRCQ7RTU9 1775 aa14.18□□□□□ -0.14
NXF3-205ENST00000470724 UBR1Q8IWV7 1749 aa14.18□□□□□ -0.14
NXF3-205ENST00000470724 RIMS2Q9UQ26 1411 aa14.17□□□□□ -0.14
NXF3-205ENST00000470724 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.17□□□□□ -0.14
NXF3-205ENST00000470724 ZNF335Q9H4Z2 1342 aaPredicted RBP14.16□□□□□ -0.14
NXF3-205ENST00000470724 CCDC144AA2RUR9 1427 aa14.15□□□□□ -0.14
NXF3-205ENST00000470724 RGL3Q3MIN7 710 aa14.15□□□□□ -0.14
NXF3-205ENST00000470724 SLC26A8Q96RN1 970 aa14.15□□□□□ -0.14
NXF3-205ENST00000470724 TRPM2O94759 1503 aa14.15□□□□□ -0.14
NXF3-205ENST00000470724 HRCP23327 699 aa14.14□□□□□ -0.15
NXF3-205ENST00000470724 SPHKAPQ2M3C7 1700 aa14.14□□□□□ -0.15
NXF3-205ENST00000470724 SLIT1O75093 1534 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms