RNA–Protein interactions for RNA: ENST00000470695.1

IFT88-205, Transcript of intraflagellar transport 88, humanhuman

TSL 2

Gene IFT88, Length 407 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-205ENST00000470695 YEATS2Q9ULM3 1422 aa18.43■□□□□ 0.54
IFT88-205ENST00000470695 REREQ9P2R6 1566 aa18.42■□□□□ 0.54
IFT88-205ENST00000470695 ATP10AO60312 1499 aa18.42■□□□□ 0.54
IFT88-205ENST00000470695 BCORL1Q5H9F3 1711 aa18.42■□□□□ 0.54
IFT88-205ENST00000470695 DEPDC5O75140 1603 aa18.4■□□□□ 0.54
IFT88-205ENST00000470695 NUP155O75694 1391 aa18.4■□□□□ 0.54
IFT88-205ENST00000470695 ARHGEF40Q8TER5 1519 aa18.39■□□□□ 0.54
IFT88-205ENST00000470695 MPHOSPH9Q99550 1183 aa18.39■□□□□ 0.53
IFT88-205ENST00000470695 PZPP20742 1482 aa18.39■□□□□ 0.53
IFT88-205ENST00000470695 KIF3BO15066 747 aa18.37■□□□□ 0.53
IFT88-205ENST00000470695 RNF17Q9BXT8 1623 aaKnown RBP18.37■□□□□ 0.53
IFT88-205ENST00000470695 AGLP35573 1532 aa18.36■□□□□ 0.53
IFT88-205ENST00000470695 IQGAP3Q86VI3 1631 aa18.36■□□□□ 0.53
IFT88-205ENST00000470695 SLC4A1APQ9BWU0 796 aaKnown RBP18.36■□□□□ 0.53
IFT88-205ENST00000470695 ZEB1P37275 1124 aaPredicted RBP18.35■□□□□ 0.53
IFT88-205ENST00000470695 PRDM15P57071 1507 aaPredicted RBP18.34■□□□□ 0.53
IFT88-205ENST00000470695 FAM135AQ9P2D6 1515 aa18.34■□□□□ 0.53
IFT88-205ENST00000470695 VWDEQ8N2E2 1590 aa18.34■□□□□ 0.53
IFT88-205ENST00000470695 KANK1Q14678 1352 aa18.33■□□□□ 0.53
IFT88-205ENST00000470695 MROH1Q8NDA8 1641 aa18.33■□□□□ 0.52
IFT88-205ENST00000470695 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.31■□□□□ 0.52
IFT88-205ENST00000470695 PPP6R1Q9UPN7 881 aa18.29■□□□□ 0.52
IFT88-205ENST00000470695 LMTK2Q8IWU2 1503 aa18.28■□□□□ 0.52
IFT88-205ENST00000470695 PKD2Q13563 968 aa18.28■□□□□ 0.52
IFT88-205ENST00000470695 TET3O43151 1660 aa18.26■□□□□ 0.51
IFT88-205ENST00000470695 ANKRD30BQ9BXX2 1392 aa18.26■□□□□ 0.51
IFT88-205ENST00000470695 GGT6Q6P531 493 aa18.25■□□□□ 0.51
IFT88-205ENST00000470695 ZC3H13Q5T200 1668 aaKnown RBP18.24■□□□□ 0.51
IFT88-205ENST00000470695 SIGLEC1Q9BZZ2 1709 aa18.23■□□□□ 0.51
IFT88-205ENST00000470695 ABCC3O15438 1527 aa18.22■□□□□ 0.51
IFT88-205ENST00000470695 FOXD1Q16676 465 aa18.21■□□□□ 0.51
IFT88-205ENST00000470695 TIMELESSQ9UNS1 1208 aa18.21■□□□□ 0.51
IFT88-205ENST00000470695 WASHC2CQ9Y4E1 1318 aa18.21■□□□□ 0.51
IFT88-205ENST00000470695 EFCAB6Q5THR3 1501 aa18.2■□□□□ 0.5
IFT88-205ENST00000470695 RPRD2Q5VT52 1461 aaKnown RBP18.2■□□□□ 0.5
IFT88-205ENST00000470695 E9PCH4 1651 aa18.19■□□□□ 0.5
IFT88-205ENST00000470695 CEP152O94986 1710 aa18.19■□□□□ 0.5
IFT88-205ENST00000470695 ARHGAP31Q2M1Z3 1444 aa18.18■□□□□ 0.5
IFT88-205ENST00000470695 SIN3AQ96ST3 1273 aa18.17■□□□□ 0.5
IFT88-205ENST00000470695 PTPRTO14522 1441 aa18.16■□□□□ 0.5
IFT88-205ENST00000470695 CAMSAP1Q5T5Y3 1602 aa18.16■□□□□ 0.5
IFT88-205ENST00000470695 ARID4BQ4LE39 1312 aaPredicted RBP18.15■□□□□ 0.5
IFT88-205ENST00000470695 PLA2R1Q13018 1463 aa18.14■□□□□ 0.5
IFT88-205ENST00000470695 NEUROD1Q13562 356 aa18.13■□□□□ 0.49
IFT88-205ENST00000470695 NPATQ14207 1427 aa18.13■□□□□ 0.49
IFT88-205ENST00000470695 CNTLNQ9NXG0 1405 aa18.12■□□□□ 0.49
IFT88-205ENST00000470695 TRPM2O94759 1503 aa18.12■□□□□ 0.49
IFT88-205ENST00000470695 SPHKAPQ2M3C7 1700 aa18.12■□□□□ 0.49
IFT88-205ENST00000470695 CCDC144AA2RUR9 1427 aa18.11■□□□□ 0.49
IFT88-205ENST00000470695 MLECQ14165 292 aa18.1■□□□□ 0.49
IFT88-205ENST00000470695 ESF1Q9H501 851 aaKnown RBP18.1■□□□□ 0.49
IFT88-205ENST00000470695 TONSLQ96HA7 1378 aa18.09■□□□□ 0.49
IFT88-205ENST00000470695 CLTCQ00610 1675 aaKnown RBP18.09■□□□□ 0.49
IFT88-205ENST00000470695 NOS1P29475 1434 aa18.08■□□□□ 0.49
IFT88-205ENST00000470695 MROH2AA6NES4 1674 aa18.06■□□□□ 0.48
IFT88-205ENST00000470695 ZMYM3Q14202 1370 aa18.04■□□□□ 0.48
IFT88-205ENST00000470695 NEURL4Q96JN8 1562 aa18.04■□□□□ 0.48
IFT88-205ENST00000470695 PREX1Q8TCU6 1659 aa18.03■□□□□ 0.48
IFT88-205ENST00000470695 ERVK-7P63135 1459 aa18.02■□□□□ 0.48
IFT88-205ENST00000470695 CLTCL1P53675 1640 aa18.02■□□□□ 0.48
IFT88-205ENST00000470695 SPATA31D1Q6ZQQ2 1576 aa18.01■□□□□ 0.47
IFT88-205ENST00000470695 PPP1R15AO75807 674 aaPredicted RBP18.01■□□□□ 0.47
IFT88-205ENST00000470695 FER1L4A9Z1Z3 1794 aa18.01■□□□□ 0.47
IFT88-205ENST00000470695 L3MBTL2Q969R5 705 aa18■□□□□ 0.47
IFT88-205ENST00000470695 SLC52A1Q9NWF4 448 aa18■□□□□ 0.47
IFT88-205ENST00000470695 PIK3C2BO00750 1634 aa18■□□□□ 0.47
IFT88-205ENST00000470695 SYNMO15061 1565 aa18■□□□□ 0.47
IFT88-205ENST00000470695 ADAMTSL3P82987 1691 aa17.99■□□□□ 0.47
IFT88-205ENST00000470695 SPATA31E1Q6ZUB1 1445 aa17.99■□□□□ 0.47
IFT88-205ENST00000470695 CFAP65Q6ZU64 1925 aaKnown RBP17.97■□□□□ 0.47
IFT88-205ENST00000470695 KIF1BO60333 1816 aa17.96■□□□□ 0.47
IFT88-205ENST00000470695 FBXO31Q5XUX0 539 aaPredicted RBP17.96■□□□□ 0.47
IFT88-205ENST00000470695 STAC3Q96MF2 364 aa17.96■□□□□ 0.47
IFT88-205ENST00000470695 UGGT1Q9NYU2 1555 aa17.96■□□□□ 0.46
IFT88-205ENST00000470695 MADDQ8WXG6 1647 aa17.94■□□□□ 0.46
IFT88-205ENST00000470695 C3P01024 1663 aa17.93■□□□□ 0.46
IFT88-205ENST00000470695 ADGRB3O60242 1522 aa17.93■□□□□ 0.46
IFT88-205ENST00000470695 IDI1Q13907 227 aa17.92■□□□□ 0.46
IFT88-205ENST00000470695 TNRQ92752 1358 aa17.91■□□□□ 0.46
IFT88-205ENST00000470695 UHRF1BP1Q6BDS2 1440 aa17.91■□□□□ 0.46
IFT88-205ENST00000470695 RGL3Q3MIN7 710 aa17.91■□□□□ 0.46
IFT88-205ENST00000470695 RPGRIP1LQ68CZ1 1315 aa17.9■□□□□ 0.46
IFT88-205ENST00000470695 RIMS1Q86UR5 1692 aaKnown RBP17.9■□□□□ 0.46
IFT88-205ENST00000470695 DCAF11Q8TEB1 546 aa17.89■□□□□ 0.45
IFT88-205ENST00000470695 NLRP1Q9C000 1473 aa17.88■□□□□ 0.45
IFT88-205ENST00000470695 TMEM131LA2VDJ0 1609 aa17.87■□□□□ 0.45
IFT88-205ENST00000470695 KDM5AP29375 1690 aaKnown RBP17.87■□□□□ 0.45
IFT88-205ENST00000470695 CEBPAP49715 358 aaPredicted RBP17.86■□□□□ 0.45
IFT88-205ENST00000470695 CHGAP10645 457 aaKnown RBP17.85■□□□□ 0.45
IFT88-205ENST00000470695 MYOM2P54296 1465 aa17.85■□□□□ 0.45
IFT88-205ENST00000470695 IFT172Q9UG01 1749 aa17.84■□□□□ 0.45
IFT88-205ENST00000470695 NBPF8Q3BBV2 869 aa17.84■□□□□ 0.45
IFT88-205ENST00000470695 PRAG1Q86YV5 1406 aa17.83■□□□□ 0.45
IFT88-205ENST00000470695 ZNF326Q5BKZ1 582 aaKnown RBP17.83■□□□□ 0.44
IFT88-205ENST00000470695 KDM2AQ9Y2K7 1162 aa17.83■□□□□ 0.44
IFT88-205ENST00000470695 A2ML1A8K2U0 1454 aa17.82■□□□□ 0.44
IFT88-205ENST00000470695 PTPRMP28827 1452 aa17.82■□□□□ 0.44
IFT88-205ENST00000470695 PPLO60437 1756 aa17.81■□□□□ 0.44
IFT88-205ENST00000470695 STAG3Q9UJ98 1225 aa17.81■□□□□ 0.44
IFT88-205ENST00000470695 ZFYVE9O95405 1425 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms