RNA–Protein interactions for RNA: ENST00000470606.5

GTF3A-206, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 1,919 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-206ENST00000470606 DHX29Q7Z478 1369 aaKnown RBP12.15□□□□□ -0.46
GTF3A-206ENST00000470606 ACIN1Q9UKV3 1341 aaKnown RBP12.15□□□□□ -0.46
GTF3A-206ENST00000470606 DEPDC5O75140 1603 aa12.15□□□□□ -0.46
GTF3A-206ENST00000470606 IQGAP3Q86VI3 1631 aa12.15□□□□□ -0.46
GTF3A-206ENST00000470606 MROH1Q8NDA8 1641 aa12.15□□□□□ -0.46
GTF3A-206ENST00000470606 YEATS2Q9ULM3 1422 aa12.15□□□□□ -0.46
GTF3A-206ENST00000470606 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.15□□□□□ -0.466e-10■■■□□ 18.9
GTF3A-206ENST00000470606 MYT1LQ9UL68 1186 aa12.14□□□□□ -0.47
GTF3A-206ENST00000470606 DIP2CQ9Y2E4 1556 aa12.14□□□□□ -0.47
GTF3A-206ENST00000470606 TEX14Q8IWB6 1497 aa12.14□□□□□ -0.47
GTF3A-206ENST00000470606 A2MP01023 1474 aa12.13□□□□□ -0.47
GTF3A-206ENST00000470606 ZMYM4Q5VZL5 1548 aa12.12□□□□□ -0.47
GTF3A-206ENST00000470606 EIF2AK4Q9P2K8 1649 aaKnown RBP12.12□□□□□ -0.47
GTF3A-206ENST00000470606 VWDEQ8N2E2 1590 aa12.12□□□□□ -0.47
GTF3A-206ENST00000470606 KIF3BO15066 747 aa12.11□□□□□ -0.47
GTF3A-206ENST00000470606 PLA2R1Q13018 1463 aa12.11□□□□□ -0.47
GTF3A-206ENST00000470606 RPRD2Q5VT52 1461 aaKnown RBP12.11□□□□□ -0.47
GTF3A-206ENST00000470606 PRDM15P57071 1507 aaPredicted RBP12.09□□□□□ -0.47
GTF3A-206ENST00000470606 SIGLEC1Q9BZZ2 1709 aa12.09□□□□□ -0.47
GTF3A-206ENST00000470606 RNF17Q9BXT8 1623 aaKnown RBP12.09□□□□□ -0.47
GTF3A-206ENST00000470606 PPP1R15AO75807 674 aaPredicted RBP12.09□□□□□ -0.47
GTF3A-206ENST00000470606 BCORL1Q5H9F3 1711 aa12.09□□□□□ -0.47
GTF3A-206ENST00000470606 E9PCH4 1651 aa12.08□□□□□ -0.47
GTF3A-206ENST00000470606 TIMELESSQ9UNS1 1208 aa12.08□□□□□ -0.48
GTF3A-206ENST00000470606 TONSLQ96HA7 1378 aa12.07□□□□□ -0.48
GTF3A-206ENST00000470606 L3MBTL2Q969R5 705 aa12.06□□□□□ -0.48
GTF3A-206ENST00000470606 TET3O43151 1660 aa12.05□□□□□ -0.48
GTF3A-206ENST00000470606 CEP152O94986 1710 aa12.05□□□□□ -0.48
GTF3A-206ENST00000470606 TRHP20396 242 aaPredicted RBP12.03□□□□□ -0.48
GTF3A-206ENST00000470606 CFAP65Q6ZU64 1925 aaKnown RBP12.03□□□□□ -0.48
GTF3A-206ENST00000470606 ATP10AO60312 1499 aa12.03□□□□□ -0.48
GTF3A-206ENST00000470606 GGT6Q6P531 493 aa12.03□□□□□ -0.48
GTF3A-206ENST00000470606 LMTK2Q8IWU2 1503 aa12.02□□□□□ -0.49
GTF3A-206ENST00000470606 EFCAB6Q5THR3 1501 aa12.01□□□□□ -0.49
GTF3A-206ENST00000470606 ARHGEF40Q8TER5 1519 aa12.01□□□□□ -0.49
GTF3A-206ENST00000470606 PTPRTO14522 1441 aa12.01□□□□□ -0.49
GTF3A-206ENST00000470606 ABCC3O15438 1527 aa12.01□□□□□ -0.49
GTF3A-206ENST00000470606 REREQ9P2R6 1566 aa12.01□□□□□ -0.49
GTF3A-206ENST00000470606 SPHKAPQ2M3C7 1700 aa12□□□□□ -0.49
GTF3A-206ENST00000470606 NBPF8Q3BBV2 869 aa12□□□□□ -0.49
GTF3A-206ENST00000470606 KANK1Q14678 1352 aa12□□□□□ -0.49
GTF3A-206ENST00000470606 ZNF316A6NFI3 1004 aaPredicted RBP11.99□□□□□ -0.49
GTF3A-206ENST00000470606 CCDC144AA2RUR9 1427 aa11.99□□□□□ -0.49
GTF3A-206ENST00000470606 UGGT1Q9NYU2 1555 aa11.98□□□□□ -0.49
GTF3A-206ENST00000470606 TRPM2O94759 1503 aa11.98□□□□□ -0.49
GTF3A-206ENST00000470606 NPATQ14207 1427 aa11.98□□□□□ -0.49
GTF3A-206ENST00000470606 CLTCL1P53675 1640 aa11.98□□□□□ -0.49
GTF3A-206ENST00000470606 AGLP35573 1532 aa11.98□□□□□ -0.49
GTF3A-206ENST00000470606 CAMSAP1Q5T5Y3 1602 aa11.97□□□□□ -0.49
GTF3A-206ENST00000470606 WASHC2CQ9Y4E1 1318 aa11.96□□□□□ -0.49
GTF3A-206ENST00000470606 SPATA31E1Q6ZUB1 1445 aa11.95□□□□□ -0.5
GTF3A-206ENST00000470606 RGL3Q3MIN7 710 aa11.94□□□□□ -0.5
GTF3A-206ENST00000470606 HIRIP3Q9BW71 556 aaPredicted RBP11.94□□□□□ -0.5
GTF3A-206ENST00000470606 ZC3H13Q5T200 1668 aaKnown RBP11.93□□□□□ -0.5
GTF3A-206ENST00000470606 DCAF11Q8TEB1 546 aa11.92□□□□□ -0.5
GTF3A-206ENST00000470606 UHRF1BP1Q6BDS2 1440 aa11.92□□□□□ -0.5
GTF3A-206ENST00000470606 KDM2AQ9Y2K7 1162 aa11.92□□□□□ -0.5
GTF3A-206ENST00000470606 SYNMO15061 1565 aa11.91□□□□□ -0.5
GTF3A-206ENST00000470606 NOS1P29475 1434 aa11.91□□□□□ -0.5
GTF3A-206ENST00000470606 ARHGAP31Q2M1Z3 1444 aa11.91□□□□□ -0.5
GTF3A-206ENST00000470606 MLECQ14165 292 aa11.91□□□□□ -0.5
GTF3A-206ENST00000470606 MROH2AA6NES4 1674 aa11.91□□□□□ -0.5
GTF3A-206ENST00000470606 CLTCQ00610 1675 aaKnown RBP11.91□□□□□ -0.5
GTF3A-206ENST00000470606 ZNF326Q5BKZ1 582 aaKnown RBP11.9□□□□□ -0.51
GTF3A-206ENST00000470606 PIK3C2BO00750 1634 aa11.89□□□□□ -0.51
GTF3A-206ENST00000470606 FBXO31Q5XUX0 539 aaPredicted RBP11.89□□□□□ -0.51
GTF3A-206ENST00000470606 PREX1Q8TCU6 1659 aa11.89□□□□□ -0.51
GTF3A-206ENST00000470606 KIF1BO60333 1816 aa11.88□□□□□ -0.51
GTF3A-206ENST00000470606 PRAG1Q86YV5 1406 aa11.88□□□□□ -0.51
GTF3A-206ENST00000470606 CNTLNQ9NXG0 1405 aa11.88□□□□□ -0.51
GTF3A-206ENST00000470606 ADGRB3O60242 1522 aa11.86□□□□□ -0.51
GTF3A-206ENST00000470606 NEURL4Q96JN8 1562 aa11.86□□□□□ -0.51
GTF3A-206ENST00000470606 TRPM1Q7Z4N2 1603 aa11.86□□□□□ -0.51
GTF3A-206ENST00000470606 RALGAPBQ86X10 1494 aa11.86□□□□□ -0.51
GTF3A-206ENST00000470606 IFT172Q9UG01 1749 aa11.86□□□□□ -0.51
GTF3A-206ENST00000470606 DIEXFQ68CQ4 756 aaKnown RBP11.86□□□□□ -0.51
GTF3A-206ENST00000470606 PPP6R1Q9UPN7 881 aa11.86□□□□□ -0.51
GTF3A-206ENST00000470606 MYO5BQ9ULV0 1848 aa11.85□□□□□ -0.51
GTF3A-206ENST00000470606 HSPA5P11021 654 aaKnown RBP11.85□□□□□ -0.51
GTF3A-206ENST00000470606 ERVK-7P63135 1459 aa11.85□□□□□ -0.51
GTF3A-206ENST00000470606 MADDQ8WXG6 1647 aa11.84□□□□□ -0.51
GTF3A-206ENST00000470606 IDI1Q13907 227 aa11.84□□□□□ -0.51
GTF3A-206ENST00000470606 NBPF1Q3BBV0 1214 aa11.84□□□□□ -0.51
GTF3A-206ENST00000470606 ARID4BQ4LE39 1312 aaPredicted RBP11.84□□□□□ -0.51
GTF3A-206ENST00000470606 ZMYM3Q14202 1370 aa11.82□□□□□ -0.52
GTF3A-206ENST00000470606 PPLO60437 1756 aa11.82□□□□□ -0.52
GTF3A-206ENST00000470606 SPATA31D1Q6ZQQ2 1576 aa11.82□□□□□ -0.52
GTF3A-206ENST00000470606 C11orf95C9JLR9 678 aaPredicted RBP11.82□□□□□ -0.52
GTF3A-206ENST00000470606 TMEM131LA2VDJ0 1609 aa11.81□□□□□ -0.52
GTF3A-206ENST00000470606 ADGRF5Q8IZF2 1346 aa11.81□□□□□ -0.52
GTF3A-206ENST00000470606 EIF4G2P78344 907 aaKnown RBP eCLIP11.81□□□□□ -0.52
GTF3A-206ENST00000470606 CHGAP10645 457 aaKnown RBP11.8□□□□□ -0.52
GTF3A-206ENST00000470606 NRXN1Q9ULB1 1477 aa11.79□□□□□ -0.52
GTF3A-206ENST00000470606 GPRASP1Q5JY77 1395 aa11.79□□□□□ -0.52
GTF3A-206ENST00000470606 USP47Q96K76 1375 aa11.79□□□□□ -0.52
GTF3A-206ENST00000470606 MYOM2P54296 1465 aa11.79□□□□□ -0.52
GTF3A-206ENST00000470606 ROCK2O75116 1388 aaKnown RBP11.79□□□□□ -0.52
GTF3A-206ENST00000470606 NEXMIFQ5QGS0 1516 aa11.78□□□□□ -0.52
GTF3A-206ENST00000470606 CARD11Q9BXL7 1154 aa11.78□□□□□ -0.52
GTF3A-206ENST00000470606 SLC52A1Q9NWF4 448 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms