RNA–Protein interactions for RNA: ENST00000470401.3

RN7SL223P-201, Transcript of RNA, 7SL, cytoplasmic 223, pseudogene, humanhuman

BASIC

Gene RN7SL223P, Length 294 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL223P-201ENST00000470401 UPF1Q92900 1129 aaKnown RBP eCLIP14.23□□□□□ -0.13
RN7SL223P-201ENST00000470401 CDC42BPAQ5VT25 1732 aa14.23□□□□□ -0.13
RN7SL223P-201ENST00000470401 INO80Q9ULG1 1556 aaPredicted RBP14.22□□□□□ -0.13
RN7SL223P-201ENST00000470401 IQGAP1P46940 1657 aa14.22□□□□□ -0.13
RN7SL223P-201ENST00000470401 SYCP2Q9BX26 1530 aa14.21□□□□□ -0.13
RN7SL223P-201ENST00000470401 THEMISQ8N1K5 641 aaPredicted RBP14.21□□□□□ -0.13
RN7SL223P-201ENST00000470401 FAM135BQ49AJ0 1406 aa14.2□□□□□ -0.14
RN7SL223P-201ENST00000470401 HNRNPMP52272 730 aaKnown RBP eCLIP14.19□□□□□ -0.14
RN7SL223P-201ENST00000470401 PZPP20742 1482 aa14.18□□□□□ -0.14
RN7SL223P-201ENST00000470401 XIRP1Q702N8 1843 aaKnown RBP14.18□□□□□ -0.14
RN7SL223P-201ENST00000470401 UGGT1Q9NYU2 1555 aa14.17□□□□□ -0.14
RN7SL223P-201ENST00000470401 NLRP1Q9C000 1473 aa14.17□□□□□ -0.14
RN7SL223P-201ENST00000470401 ARHGAP35Q9NRY4 1499 aa14.17□□□□□ -0.14
RN7SL223P-201ENST00000470401 KIAA1107Q9UPP5 1409 aa14.16□□□□□ -0.14
RN7SL223P-201ENST00000470401 ADGBQ8N7X0 1667 aa14.16□□□□□ -0.14
RN7SL223P-201ENST00000470401 EEA1Q15075 1411 aa14.15□□□□□ -0.14
RN7SL223P-201ENST00000470401 MIA2Q96PC5 1412 aa14.15□□□□□ -0.14
RN7SL223P-201ENST00000470401 FAM135AQ9P2D6 1515 aa14.15□□□□□ -0.14
RN7SL223P-201ENST00000470401 ZC3H13Q5T200 1668 aaKnown RBP14.15□□□□□ -0.14
RN7SL223P-201ENST00000470401 ZNF777Q9ULD5 760 aaPredicted RBP14.15□□□□□ -0.14
RN7SL223P-201ENST00000470401 GPATCH8Q9UKJ3 1502 aaKnown RBP14.13□□□□□ -0.15
RN7SL223P-201ENST00000470401 KDM5DQ9BY66 1539 aa14.1□□□□□ -0.15
RN7SL223P-201ENST00000470401 PLEKHH2Q8IVE3 1493 aa14.1□□□□□ -0.15
RN7SL223P-201ENST00000470401 ROBO1Q9Y6N7 1651 aa14.1□□□□□ -0.15
RN7SL223P-201ENST00000470401 DHX29Q7Z478 1369 aaKnown RBP14.09□□□□□ -0.15
RN7SL223P-201ENST00000470401 CCDC18Q5T9S5 1454 aa14.08□□□□□ -0.16
RN7SL223P-201ENST00000470401 WASHC2CQ9Y4E1 1318 aa14.05□□□□□ -0.16
RN7SL223P-201ENST00000470401 JCADQ9P266 1359 aa14.05□□□□□ -0.16
RN7SL223P-201ENST00000470401 RTEL1-TNFRSF6BF6WH68 1400 aa14.05□□□□□ -0.16
RN7SL223P-201ENST00000470401 CASKIN1Q8WXD9 1431 aa14.05□□□□□ -0.16
RN7SL223P-201ENST00000470401 KIF3BO15066 747 aa14.04□□□□□ -0.16
RN7SL223P-201ENST00000470401 TRIM52Q96A61 297 aa14.04□□□□□ -0.16
RN7SL223P-201ENST00000470401 CFDP1Q9UEE9 299 aaPredicted RBP14.04□□□□□ -0.16
RN7SL223P-201ENST00000470401 SCAF11Q99590 1463 aaKnown RBP14.04□□□□□ -0.16
RN7SL223P-201ENST00000470401 MBD5Q9P267 1494 aa14.03□□□□□ -0.16
RN7SL223P-201ENST00000470401 LRP6O75581 1613 aa14.02□□□□□ -0.16
RN7SL223P-201ENST00000470401 MAP3K1Q13233 1512 aa14.02□□□□□ -0.16
RN7SL223P-201ENST00000470401 TMEM94Q12767 1356 aa14.02□□□□□ -0.17
RN7SL223P-201ENST00000470401 LTKP29376 864 aa14.02□□□□□ -0.17
RN7SL223P-201ENST00000470401 ZNF772Q68DY9 489 aaPredicted RBP14.02□□□□□ -0.17
RN7SL223P-201ENST00000470401 UBR1Q8IWV7 1749 aa14.01□□□□□ -0.17
RN7SL223P-201ENST00000470401 LRRC9Q6ZRR7 1453 aa14.01□□□□□ -0.17
RN7SL223P-201ENST00000470401 ARHGAP23Q9P227 1491 aa14.01□□□□□ -0.17
RN7SL223P-201ENST00000470401 NCOA2Q15596 1464 aa14□□□□□ -0.17
RN7SL223P-201ENST00000470401 CDK12Q9NYV4 1490 aaPredicted RBP14□□□□□ -0.17
RN7SL223P-201ENST00000470401 PHLPP1O60346 1717 aa14□□□□□ -0.17
RN7SL223P-201ENST00000470401 SLIT1O75093 1534 aa14□□□□□ -0.17
RN7SL223P-201ENST00000470401 ZNF644Q9H582 1327 aaPredicted RBP13.99□□□□□ -0.17
RN7SL223P-201ENST00000470401 UBTFP17480 764 aaKnown RBP13.98□□□□□ -0.17
RN7SL223P-201ENST00000470401 ERVK-7P63135 1459 aa13.98□□□□□ -0.17
RN7SL223P-201ENST00000470401 COL16A1Q07092 1604 aaPredicted RBP13.97□□□□□ -0.17
RN7SL223P-201ENST00000470401 RXRBP28702 533 aa13.97□□□□□ -0.17
RN7SL223P-201ENST00000470401 TXNDC2Q86VQ3 553 aa13.97□□□□□ -0.17
RN7SL223P-201ENST00000470401 CCNB3Q8WWL7 1395 aa13.96□□□□□ -0.17
RN7SL223P-201ENST00000470401 SPATA31A6Q5VVP1 1343 aa13.96□□□□□ -0.17
RN7SL223P-201ENST00000470401 KCNA6P17658 529 aa13.95□□□□□ -0.18
RN7SL223P-201ENST00000470401 FGD6Q6ZV73 1430 aa13.95□□□□□ -0.18
RN7SL223P-201ENST00000470401 ABCC3O15438 1527 aa13.95□□□□□ -0.18
RN7SL223P-201ENST00000470401 SLAIN2Q9P270 581 aa13.94□□□□□ -0.18
RN7SL223P-201ENST00000470401 PRDM15P57071 1507 aaPredicted RBP13.94□□□□□ -0.18
RN7SL223P-201ENST00000470401 RBM33Q96EV2 1170 aaKnown RBP13.93□□□□□ -0.18
RN7SL223P-201ENST00000470401 FYCO1Q9BQS8 1478 aa13.93□□□□□ -0.18
RN7SL223P-201ENST00000470401 MEX3CQ5U5Q3 659 aaKnown RBP13.92□□□□□ -0.18
RN7SL223P-201ENST00000470401 PROSER2Q86WR7 435 aaPredicted RBP13.92□□□□□ -0.18
RN7SL223P-201ENST00000470401 EHMT2Q96KQ7 1210 aa13.92□□□□□ -0.18
RN7SL223P-201ENST00000470401 TIAM1Q13009 1591 aa13.92□□□□□ -0.18
RN7SL223P-201ENST00000470401 CFAP65Q6ZU64 1925 aaKnown RBP13.9□□□□□ -0.18
RN7SL223P-201ENST00000470401 SHPRHQ149N8 1683 aa13.9□□□□□ -0.18
RN7SL223P-201ENST00000470401 TET3O43151 1660 aa13.89□□□□□ -0.19
RN7SL223P-201ENST00000470401 NKTRP30414 1462 aaKnown RBP13.89□□□□□ -0.19
RN7SL223P-201ENST00000470401 CAMSAP2Q08AD1 1489 aa13.89□□□□□ -0.19
RN7SL223P-201ENST00000470401 MSH6P52701 1360 aa13.89□□□□□ -0.19
RN7SL223P-201ENST00000470401 EID1Q9Y6B2 187 aa13.89□□□□□ -0.19
RN7SL223P-201ENST00000470401 RGS12O14924 1447 aa13.89□□□□□ -0.19
RN7SL223P-201ENST00000470401 NWD1Q149M9 1564 aa13.88□□□□□ -0.19
RN7SL223P-201ENST00000470401 SETBP1Q9Y6X0 1596 aa13.88□□□□□ -0.19
RN7SL223P-201ENST00000470401 CCDC141Q6ZP82 1450 aa13.88□□□□□ -0.19
RN7SL223P-201ENST00000470401 TMEM2Q9UHN6 1383 aa13.87□□□□□ -0.19
RN7SL223P-201ENST00000470401 EP400Q96L91 3159 aa13.86□□□□□ -0.19
RN7SL223P-201ENST00000470401 AHDC1Q5TGY3 1603 aaPredicted RBP13.86□□□□□ -0.19
RN7SL223P-201ENST00000470401 MROH1Q8NDA8 1641 aa13.86□□□□□ -0.19
RN7SL223P-201ENST00000470401 CHIC1Q5VXU3 224 aa13.85□□□□□ -0.19
RN7SL223P-201ENST00000470401 SLC26A8Q96RN1 970 aa13.85□□□□□ -0.19
RN7SL223P-201ENST00000470401 ZRANB1Q9UGI0 708 aa13.85□□□□□ -0.19
RN7SL223P-201ENST00000470401 AFF2P51816 1311 aa13.85□□□□□ -0.19
RN7SL223P-201ENST00000470401 KDM5AP29375 1690 aaKnown RBP13.84□□□□□ -0.19
RN7SL223P-201ENST00000470401 DIP2AQ14689 1571 aa13.83□□□□□ -0.19
RN7SL223P-201ENST00000470401 PIK3C2BO00750 1634 aa13.83□□□□□ -0.2
RN7SL223P-201ENST00000470401 RSPH4AQ5TD94 716 aa13.83□□□□□ -0.2
RN7SL223P-201ENST00000470401 CEP152O94986 1710 aa13.83□□□□□ -0.2
RN7SL223P-201ENST00000470401 RBM6P78332 1123 aaKnown RBP13.82□□□□□ -0.2
RN7SL223P-201ENST00000470401 MTUS2Q5JR59 1369 aa13.82□□□□□ -0.2
RN7SL223P-201ENST00000470401 ARHGAP31Q2M1Z3 1444 aa13.81□□□□□ -0.2
RN7SL223P-201ENST00000470401 EIF2AK4Q9P2K8 1649 aaKnown RBP13.8□□□□□ -0.2
RN7SL223P-201ENST00000470401 NUTM2BA6NNL0 878 aaPredicted RBP13.8□□□□□ -0.2
RN7SL223P-201ENST00000470401 NUTM2EB1AL46 878 aaPredicted RBP13.8□□□□□ -0.2
RN7SL223P-201ENST00000470401 FOXD1Q16676 465 aa13.8□□□□□ -0.2
RN7SL223P-201ENST00000470401 NUTM2DQ5VT03 806 aaPredicted RBP13.8□□□□□ -0.2
RN7SL223P-201ENST00000470401 NUTM2AQ8IVF1 878 aaPredicted RBP13.8□□□□□ -0.2
RN7SL223P-201ENST00000470401 QTRT2Q9H974 415 aaKnown RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms