RNA–Protein interactions for RNA: ENST00000470005.1

CHL1-210, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 2

Gene CHL1, Length 707 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-210ENST00000470005 ZNF608Q9ULD9 1512 aaPredicted RBP11.37□□□□□ -0.59
CHL1-210ENST00000470005 FAM50AQ14320 339 aaKnown RBP11.37□□□□□ -0.59
CHL1-210ENST00000470005 EHBP1L1Q8N3D4 1523 aa11.36□□□□□ -0.59
CHL1-210ENST00000470005 CHGAP10645 457 aaKnown RBP11.36□□□□□ -0.59
CHL1-210ENST00000470005 HS6ST3Q8IZP7 471 aa11.36□□□□□ -0.59
CHL1-210ENST00000470005 RTN4Q9NQC3 1192 aaKnown RBP11.36□□□□□ -0.59
CHL1-210ENST00000470005 HECW1Q76N89 1606 aa11.35□□□□□ -0.59
CHL1-210ENST00000470005 GRIN2AQ12879 1464 aa11.34□□□□□ -0.59
CHL1-210ENST00000470005 ITGAEP38570 1179 aa11.34□□□□□ -0.59
CHL1-210ENST00000470005 NLRP6P59044 892 aa11.34□□□□□ -0.59
CHL1-210ENST00000470005 DIEXFQ68CQ4 756 aaKnown RBP11.34□□□□□ -0.59
CHL1-210ENST00000470005 FGD6Q6ZV73 1430 aa11.34□□□□□ -0.59
CHL1-210ENST00000470005 EIF4G3O43432 1585 aaKnown RBP11.33□□□□□ -0.6
CHL1-210ENST00000470005 SYNJ2O15056 1496 aa11.33□□□□□ -0.6
CHL1-210ENST00000470005 RAB3GAP2Q9H2M9 1393 aa11.33□□□□□ -0.6
CHL1-210ENST00000470005 CHMP7Q8WUX9 453 aaPredicted RBP11.33□□□□□ -0.6
CHL1-210ENST00000470005 MS4A4AQ96JQ5 239 aa11.33□□□□□ -0.6
CHL1-210ENST00000470005 MFRPQ9BY79 579 aa11.33□□□□□ -0.6
CHL1-210ENST00000470005 FBXO22Q8NEZ5 403 aa11.32□□□□□ -0.6
CHL1-210ENST00000470005 ACIN1Q9UKV3 1341 aaKnown RBP11.32□□□□□ -0.6
CHL1-210ENST00000470005 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.31□□□□□ -0.6
CHL1-210ENST00000470005 CDK11AQ9UQ88 783 aaPredicted RBP11.31□□□□□ -0.6
CHL1-210ENST00000470005 BOLA1Q9Y3E2 137 aa11.31□□□□□ -0.6
CHL1-210ENST00000470005 MYOM3Q5VTT5 1437 aa11.31□□□□□ -0.6
CHL1-210ENST00000470005 NCOA2Q15596 1464 aa11.31□□□□□ -0.6
CHL1-210ENST00000470005 SUPT6HQ7KZ85 1726 aaKnown RBP11.3□□□□□ -0.6
CHL1-210ENST00000470005 G3V3G9 751 aa11.3□□□□□ -0.6
CHL1-210ENST00000470005 CARMIL2Q6F5E8 1435 aa11.29□□□□□ -0.6
CHL1-210ENST00000470005 TIMELESSQ9UNS1 1208 aa11.29□□□□□ -0.6
CHL1-210ENST00000470005 EPRSP07814 1512 aaKnown RBP11.29□□□□□ -0.6
CHL1-210ENST00000470005 C3orf67Q6ZVT6 689 aa11.28□□□□□ -0.6
CHL1-210ENST00000470005 SLAIN1Q8ND83 568 aa11.28□□□□□ -0.6
CHL1-210ENST00000470005 MIA2Q96PC5 1412 aa11.27□□□□□ -0.6
CHL1-210ENST00000470005 ARHGEF11O15085 1522 aa11.27□□□□□ -0.61
CHL1-210ENST00000470005 KIAA0556O60303 1618 aa11.27□□□□□ -0.61
CHL1-210ENST00000470005 TMEM121BQ9BXQ6 578 aaPredicted RBP11.26□□□□□ -0.61
CHL1-210ENST00000470005 DNAJC5Q9H3Z4 198 aa11.26□□□□□ -0.61
CHL1-210ENST00000470005 NUP160Q12769 1436 aa11.26□□□□□ -0.61
CHL1-210ENST00000470005 DISP1Q96F81 1524 aa11.25□□□□□ -0.61
CHL1-210ENST00000470005 TCOF1Q13428 1488 aaKnown RBP11.25□□□□□ -0.61
CHL1-210ENST00000470005 HFM1A2PYH4 1435 aa11.23□□□□□ -0.61
CHL1-210ENST00000470005 AKNAQ7Z591 1439 aa11.22□□□□□ -0.61
CHL1-210ENST00000470005 MICALL2Q8IY33 904 aa11.22□□□□□ -0.61
CHL1-210ENST00000470005 JPH4Q96JJ6 628 aa11.22□□□□□ -0.61
CHL1-210ENST00000470005 NKX1-1Q15270 411 aaPredicted RBP11.21□□□□□ -0.61
CHL1-210ENST00000470005 RAPGEF6Q8TEU7 1601 aa11.2□□□□□ -0.62
CHL1-210ENST00000470005 PTPN23Q9H3S7 1636 aa11.2□□□□□ -0.62
CHL1-210ENST00000470005 CEP170Q5SW79 1584 aa11.2□□□□□ -0.62
CHL1-210ENST00000470005 UACAQ9BZF9 1416 aa11.19□□□□□ -0.62
CHL1-210ENST00000470005 MAPKBP1O60336 1514 aa11.19□□□□□ -0.62
CHL1-210ENST00000470005 MAGI3Q5TCQ9 1506 aa11.19□□□□□ -0.62
CHL1-210ENST00000470005 NUP153P49790 1475 aaKnown RBP11.19□□□□□ -0.62
CHL1-210ENST00000470005 LRRIQ1Q96JM4 1722 aa11.18□□□□□ -0.62
CHL1-210ENST00000470005 CENPBP07199 599 aaPredicted RBP11.18□□□□□ -0.62
CHL1-210ENST00000470005 CDK13Q14004 1512 aaKnown RBP11.18□□□□□ -0.62
CHL1-210ENST00000470005 TROQ12816 1431 aaPredicted RBP11.18□□□□□ -0.62
CHL1-210ENST00000470005 PPP1R37O75864 691 aa11.17□□□□□ -0.62
CHL1-210ENST00000470005 NAIPQ13075 1403 aa11.16□□□□□ -0.62
CHL1-210ENST00000470005 ROCK1Q13464 1354 aa11.16□□□□□ -0.62
CHL1-210ENST00000470005 PTPRKQ15262 1439 aa11.15□□□□□ -0.62
CHL1-210ENST00000470005 FAM163AQ96GL9 167 aaPredicted RBP11.14□□□□□ -0.63
CHL1-210ENST00000470005 PLEKHD1A6NEE1 506 aa11.13□□□□□ -0.63
CHL1-210ENST00000470005 RYDENQ9NUL5 291 aaKnown RBP11.13□□□□□ -0.63
CHL1-210ENST00000470005 TMEM92Q6UXU6 159 aa11.12□□□□□ -0.63
CHL1-210ENST00000470005 ARID3CA6NKF2 412 aa11.11□□□□□ -0.63
CHL1-210ENST00000470005 TONSLQ96HA7 1378 aa11.11□□□□□ -0.63
CHL1-210ENST00000470005 PLB1Q6P1J6 1458 aa11.11□□□□□ -0.63
CHL1-210ENST00000470005 PTPRGP23470 1445 aa11.1□□□□□ -0.63
CHL1-210ENST00000470005 SNPHO15079 494 aa11.1□□□□□ -0.63
CHL1-210ENST00000470005 NEUROD1Q13562 356 aa11.1□□□□□ -0.63
CHL1-210ENST00000470005 CFDP1Q9UEE9 299 aaPredicted RBP11.1□□□□□ -0.63
CHL1-210ENST00000470005 ABCA8O94911 1581 aa11.1□□□□□ -0.63
CHL1-210ENST00000470005 DAPK1P53355 1430 aa11.09□□□□□ -0.63
CHL1-210ENST00000470005 GTPBP6O43824 516 aaPredicted RBP11.09□□□□□ -0.63
CHL1-210ENST00000470005 PRG4Q92954 1404 aaPredicted RBP11.09□□□□□ -0.63
CHL1-210ENST00000470005 PPP1R15AO75807 674 aaPredicted RBP11.08□□□□□ -0.64
CHL1-210ENST00000470005 SIN3AQ96ST3 1273 aa11.08□□□□□ -0.64
CHL1-210ENST00000470005 RRP7BPQ9NSQ0 103 aa11.08□□□□□ -0.64
CHL1-210ENST00000470005 ADCY10Q96PN6 1610 aa11.08□□□□□ -0.64
CHL1-210ENST00000470005 ABCC5O15440 1437 aa11.08□□□□□ -0.64
CHL1-210ENST00000470005 GCC2Q8IWJ2 1684 aa11.08□□□□□ -0.64
CHL1-210ENST00000470005 ITSN2Q9NZM3 1697 aa11.08□□□□□ -0.64
CHL1-210ENST00000470005 LCE2DQ5TA82 110 aaPredicted RBP11.07□□□□□ -0.64
CHL1-210ENST00000470005 BBXQ8WY36 941 aaPredicted RBP11.07□□□□□ -0.64
CHL1-210ENST00000470005 TRIM52Q96A61 297 aa11.07□□□□□ -0.64
CHL1-210ENST00000470005 CHIC2Q9UKJ5 165 aa11.07□□□□□ -0.64
CHL1-210ENST00000470005 DNMT1P26358 1616 aaKnown RBP11.06□□□□□ -0.64
CHL1-210ENST00000470005 GPATCH8Q9UKJ3 1502 aaKnown RBP11.06□□□□□ -0.64
CHL1-210ENST00000470005 ATP10BO94823 1461 aa11.06□□□□□ -0.64
CHL1-210ENST00000470005 ST18O60284 1047 aa11.04□□□□□ -0.64
CHL1-210ENST00000470005 KIF14Q15058 1648 aa11.04□□□□□ -0.64
CHL1-210ENST00000470005 ANKRD30AQ9BXX3 1397 aa11.03□□□□□ -0.64
CHL1-210ENST00000470005 RSPH4AQ5TD94 716 aa11.03□□□□□ -0.64
CHL1-210ENST00000470005 MPHOSPH9Q99550 1183 aa11.03□□□□□ -0.64
CHL1-210ENST00000470005 CAMSAP2Q08AD1 1489 aa11.03□□□□□ -0.64
CHL1-210ENST00000470005 ADGRL2O95490 1459 aa11.02□□□□□ -0.65
CHL1-210ENST00000470005 ABCC10Q5T3U5 1492 aa11.01□□□□□ -0.65
CHL1-210ENST00000470005 KIF3CO14782 793 aa11.01□□□□□ -0.65
CHL1-210ENST00000470005 SHROOM2Q13796 1616 aa11.01□□□□□ -0.65
CHL1-210ENST00000470005 SHANK2Q9UPX8 1470 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms