RNA–Protein interactions for RNA: ENST00000469506.3

TRAK1-207, Transcript of trafficking kinesin protein 1, humanhuman

TSL 2

Gene TRAK1, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-207ENST00000469506 ZNF335Q9H4Z2 1342 aaPredicted RBP30.01■■■□□ 2.4
TRAK1-207ENST00000469506 RSPH4AQ5TD94 716 aa30■■■□□ 2.39
TRAK1-207ENST00000469506 A2ML1A8K2U0 1454 aa29.99■■■□□ 2.39
TRAK1-207ENST00000469506 KDM5DQ9BY66 1539 aa29.97■■■□□ 2.39
TRAK1-207ENST00000469506 PKD2Q13563 968 aa29.97■■■□□ 2.39
TRAK1-207ENST00000469506 IQSEC2Q5JU85 1478 aa29.96■■■□□ 2.39
TRAK1-207ENST00000469506 PZPP20742 1482 aa29.94■■■□□ 2.38
TRAK1-207ENST00000469506 TNRQ92752 1358 aa29.92■■■□□ 2.38
TRAK1-207ENST00000469506 MAST1Q9Y2H9 1570 aa29.92■■■□□ 2.38
TRAK1-207ENST00000469506 MAP3K1Q13233 1512 aa29.91■■■□□ 2.38
TRAK1-207ENST00000469506 TSPY4P0CV99 314 aa29.91■■■□□ 2.38
TRAK1-207ENST00000469506 TSPY10P0CW01 314 aa29.91■■■□□ 2.38
TRAK1-207ENST00000469506 WASHC2CQ9Y4E1 1318 aa29.91■■■□□ 2.38
TRAK1-207ENST00000469506 FAM135AQ9P2D6 1515 aa29.91■■■□□ 2.38
TRAK1-207ENST00000469506 POLR1AO95602 1720 aaPredicted RBP29.9■■■□□ 2.38
TRAK1-207ENST00000469506 NEURL4Q96JN8 1562 aa29.89■■■□□ 2.38
TRAK1-207ENST00000469506 RNF17Q9BXT8 1623 aaKnown RBP29.88■■■□□ 2.37
TRAK1-207ENST00000469506 MYOM3Q5VTT5 1437 aa29.85■■■□□ 2.37
TRAK1-207ENST00000469506 MIA2Q96PC5 1412 aa29.84■■■□□ 2.37
TRAK1-207ENST00000469506 MROH1Q8NDA8 1641 aa29.84■■■□□ 2.37
TRAK1-207ENST00000469506 CFAP65Q6ZU64 1925 aaKnown RBP29.83■■■□□ 2.37
TRAK1-207ENST00000469506 ABCC3O15438 1527 aa29.81■■■□□ 2.36
TRAK1-207ENST00000469506 ILDR2Q71H61 639 aa29.8■■■□□ 2.36
TRAK1-207ENST00000469506 EIF2AK4Q9P2K8 1649 aaKnown RBP29.8■■■□□ 2.36
TRAK1-207ENST00000469506 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.79■■■□□ 2.36
TRAK1-207ENST00000469506 DISP3Q9P2K9 1392 aa29.79■■■□□ 2.36
TRAK1-207ENST00000469506 CEP152O94986 1710 aa29.79■■■□□ 2.36
TRAK1-207ENST00000469506 ZC3H13Q5T200 1668 aaKnown RBP29.77■■■□□ 2.36
TRAK1-207ENST00000469506 NLRP1Q9C000 1473 aa29.76■■■□□ 2.35
TRAK1-207ENST00000469506 UBAP1LF5GYI3 381 aa29.76■■■□□ 2.35
TRAK1-207ENST00000469506 UGGT1Q9NYU2 1555 aa29.76■■■□□ 2.35
TRAK1-207ENST00000469506 SPATA31D1Q6ZQQ2 1576 aa29.75■■■□□ 2.35
TRAK1-207ENST00000469506 CROCC2H7BZ55 1655 aa29.73■■■□□ 2.35
TRAK1-207ENST00000469506 ANKLE2Q86XL3 938 aa29.71■■■□□ 2.35
TRAK1-207ENST00000469506 THEMISQ8N1K5 641 aaPredicted RBP29.71■■■□□ 2.35
TRAK1-207ENST00000469506 PTPN23Q9H3S7 1636 aa29.71■■■□□ 2.35
TRAK1-207ENST00000469506 DUOX2Q9NRD8 1548 aa29.71■■■□□ 2.35
TRAK1-207ENST00000469506 ABCC5O15440 1437 aa29.71■■■□□ 2.35
TRAK1-207ENST00000469506 VWDEQ8N2E2 1590 aa29.7■■■□□ 2.35
TRAK1-207ENST00000469506 ERVK-7P63135 1459 aa29.7■■■□□ 2.35
TRAK1-207ENST00000469506 DEPDC5O75140 1603 aa29.7■■■□□ 2.34
TRAK1-207ENST00000469506 SHANK2Q9UPX8 1470 aa29.69■■■□□ 2.34
TRAK1-207ENST00000469506 MED14O60244 1454 aa29.68■■■□□ 2.34
TRAK1-207ENST00000469506 NPHP4O75161 1426 aaPredicted RBP29.66■■■□□ 2.34
TRAK1-207ENST00000469506 STRCP1A6NGW2 1772 aa29.65■■■□□ 2.34
TRAK1-207ENST00000469506 UBR1Q8IWV7 1749 aa29.64■■■□□ 2.34
TRAK1-207ENST00000469506 CPS1P31327 1500 aa29.64■■■□□ 2.34
TRAK1-207ENST00000469506 KIF15Q9NS87 1388 aa29.64■■■□□ 2.33
TRAK1-207ENST00000469506 IQGAP1P46940 1657 aa29.63■■■□□ 2.33
TRAK1-207ENST00000469506 RRP7BPQ9NSQ0 103 aa29.63■■■□□ 2.33
TRAK1-207ENST00000469506 PRDM15P57071 1507 aaPredicted RBP29.61■■■□□ 2.33
TRAK1-207ENST00000469506 DAPK1P53355 1430 aa29.61■■■□□ 2.33
TRAK1-207ENST00000469506 FGD6Q6ZV73 1430 aa29.59■■■□□ 2.33
TRAK1-207ENST00000469506 ALKQ9UM73 1620 aa29.58■■■□□ 2.33
TRAK1-207ENST00000469506 ERBINQ96RT1 1412 aa29.57■■■□□ 2.32
TRAK1-207ENST00000469506 ARHGAP31Q2M1Z3 1444 aa29.54■■■□□ 2.32
TRAK1-207ENST00000469506 APLP2Q06481 763 aa29.54■■■□□ 2.32
TRAK1-207ENST00000469506 PIP4K2BP78356 416 aa29.53■■■□□ 2.32
TRAK1-207ENST00000469506 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.52■■■□□ 2.324e-7■□□□□ 10.7
TRAK1-207ENST00000469506 CHIC2Q9UKJ5 165 aa29.52■■■□□ 2.32
TRAK1-207ENST00000469506 HSPA1LP34931 641 aa29.51■■■□□ 2.31
TRAK1-207ENST00000469506 LTKP29376 864 aa29.5■■■□□ 2.31
TRAK1-207ENST00000469506 PIK3C2BO00750 1634 aa29.49■■■□□ 2.31
TRAK1-207ENST00000469506 SCAF1Q9H7N4 1312 aaKnown RBP29.49■■■□□ 2.31
TRAK1-207ENST00000469506 SOCS7O14512 581 aa29.49■■■□□ 2.31
TRAK1-207ENST00000469506 ARHGAP23Q9P227 1491 aa29.48■■■□□ 2.31
TRAK1-207ENST00000469506 TOM1O60784 492 aa29.48■■■□□ 2.31
TRAK1-207ENST00000469506 SLIT1O75093 1534 aa29.47■■■□□ 2.31
TRAK1-207ENST00000469506 LRRC7Q96NW7 1537 aa29.47■■■□□ 2.31
TRAK1-207ENST00000469506 SCAF11Q99590 1463 aaKnown RBP29.46■■■□□ 2.31
TRAK1-207ENST00000469506 ANKRD30AQ9BXX3 1397 aa29.43■■■□□ 2.3
TRAK1-207ENST00000469506 LMTK2Q8IWU2 1503 aa29.42■■■□□ 2.3
TRAK1-207ENST00000469506 TXNDC2Q86VQ3 553 aa29.42■■■□□ 2.3
TRAK1-207ENST00000469506 XIRP1Q702N8 1843 aaKnown RBP29.41■■■□□ 2.3
TRAK1-207ENST00000469506 SYNMO15061 1565 aa29.4■■■□□ 2.3
TRAK1-207ENST00000469506 KANK1Q14678 1352 aa29.38■■■□□ 2.29
TRAK1-207ENST00000469506 ADGRL2O95490 1459 aa29.37■■■□□ 2.29
TRAK1-207ENST00000469506 IDI1Q13907 227 aa29.36■■■□□ 2.29
TRAK1-207ENST00000469506 MED1Q15648 1581 aaPredicted RBP29.35■■■□□ 2.29
TRAK1-207ENST00000469506 TMEM2Q9UHN6 1383 aa29.35■■■□□ 2.29
TRAK1-207ENST00000469506 KDM5AP29375 1690 aaKnown RBP29.34■■■□□ 2.29
TRAK1-207ENST00000469506 EFCAB6Q5THR3 1501 aa29.34■■■□□ 2.29
TRAK1-207ENST00000469506 NOS1P29475 1434 aa29.33■■■□□ 2.29
TRAK1-207ENST00000469506 FAM50AQ14320 339 aaKnown RBP29.31■■■□□ 2.28
TRAK1-207ENST00000469506 EID1Q9Y6B2 187 aa29.29■■■□□ 2.28
TRAK1-207ENST00000469506 SENP3Q9H4L4 574 aaPredicted RBP29.28■■■□□ 2.28
TRAK1-207ENST00000469506 TET3O43151 1660 aa29.28■■■□□ 2.28
TRAK1-207ENST00000469506 MYO5BQ9ULV0 1848 aa29.27■■■□□ 2.28
TRAK1-207ENST00000469506 STAG3Q9UJ98 1225 aa29.26■■■□□ 2.27
TRAK1-207ENST00000469506 ANKRD50Q9ULJ7 1429 aa29.25■■■□□ 2.27
TRAK1-207ENST00000469506 ADGRB3O60242 1522 aa29.24■■■□□ 2.27
TRAK1-207ENST00000469506 SLC26A8Q96RN1 970 aa29.2■■■□□ 2.26
TRAK1-207ENST00000469506 GCC2Q8IWJ2 1684 aa29.16■■■□□ 2.26
TRAK1-207ENST00000469506 SLC52A1Q9NWF4 448 aa29.16■■■□□ 2.26
TRAK1-207ENST00000469506 UNC13BO14795 1591 aa29.16■■■□□ 2.26
TRAK1-207ENST00000469506 RPRD2Q5VT52 1461 aaKnown RBP29.16■■■□□ 2.26
TRAK1-207ENST00000469506 RBM33Q96EV2 1170 aaKnown RBP29.15■■■□□ 2.26
TRAK1-207ENST00000469506 KCNA6P17658 529 aa29.14■■■□□ 2.26
TRAK1-207ENST00000469506 TMEM94Q12767 1356 aa29.13■■■□□ 2.25
TRAK1-207ENST00000469506 TMEM131LA2VDJ0 1609 aa29.13■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms