RNA–Protein interactions for RNA: ENST00000469443.2

PHGDH-204, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-204ENST00000469443 KDM5DQ9BY66 1539 aa28.42■■■□□ 2.14
PHGDH-204ENST00000469443 STRCQ7RTU9 1775 aa28.42■■■□□ 2.14
PHGDH-204ENST00000469443 DAPK1P53355 1430 aa28.41■■■□□ 2.14
PHGDH-204ENST00000469443 PTPRKQ15262 1439 aa28.41■■■□□ 2.14
PHGDH-204ENST00000469443 DUOX2Q9NRD8 1548 aa28.39■■■□□ 2.14
PHGDH-204ENST00000469443 MYO3AQ8NEV4 1616 aa28.39■■■□□ 2.13
PHGDH-204ENST00000469443 ZNF142P52746 1687 aaPredicted RBP28.37■■■□□ 2.13
PHGDH-204ENST00000469443 ZC3H13Q5T200 1668 aaKnown RBP28.35■■■□□ 2.13
PHGDH-204ENST00000469443 WASHC2CQ9Y4E1 1318 aa28.34■■■□□ 2.13
PHGDH-204ENST00000469443 KIF15Q9NS87 1388 aa28.33■■■□□ 2.13
PHGDH-204ENST00000469443 MROH1Q8NDA8 1641 aa28.32■■■□□ 2.12
PHGDH-204ENST00000469443 PZPP20742 1482 aa28.31■■■□□ 2.12
PHGDH-204ENST00000469443 CEP170BQ9Y4F5 1589 aaPredicted RBP28.3■■■□□ 2.12
PHGDH-204ENST00000469443 CEP152O94986 1710 aa28.29■■■□□ 2.12
PHGDH-204ENST00000469443 ABCC3O15438 1527 aa28.28■■■□□ 2.12
PHGDH-204ENST00000469443 ERBINQ96RT1 1412 aa28.28■■■□□ 2.12
PHGDH-204ENST00000469443 RRP7BPQ9NSQ0 103 aa28.27■■■□□ 2.12
PHGDH-204ENST00000469443 CAMSAP1Q5T5Y3 1602 aa28.27■■■□□ 2.12
PHGDH-204ENST00000469443 ANKRD30AQ9BXX3 1397 aa28.26■■■□□ 2.12
PHGDH-204ENST00000469443 FAM50AQ14320 339 aaKnown RBP28.26■■■□□ 2.11
PHGDH-204ENST00000469443 DMRT2Q9Y5R5 561 aa28.26■■■□□ 2.11
PHGDH-204ENST00000469443 NCOA1Q15788 1441 aa28.26■■■□□ 2.11
PHGDH-204ENST00000469443 ILDR1Q86SU0 546 aaPredicted RBP28.24■■■□□ 2.11
PHGDH-204ENST00000469443 CHIC2Q9UKJ5 165 aa28.24■■■□□ 2.11
PHGDH-204ENST00000469443 DEPDC5O75140 1603 aa28.24■■■□□ 2.11
PHGDH-204ENST00000469443 ADGRL2O95490 1459 aa28.23■■■□□ 2.11
PHGDH-204ENST00000469443 TNRQ92752 1358 aa28.23■■■□□ 2.11
PHGDH-204ENST00000469443 PRDM15P57071 1507 aaPredicted RBP28.23■■■□□ 2.11
PHGDH-204ENST00000469443 CFAP65Q6ZU64 1925 aaKnown RBP28.22■■■□□ 2.11
PHGDH-204ENST00000469443 FBXO31Q5XUX0 539 aaPredicted RBP28.22■■■□□ 2.11
PHGDH-204ENST00000469443 A2ML1A8K2U0 1454 aa28.21■■■□□ 2.11
PHGDH-204ENST00000469443 PTPRTO14522 1441 aa28.2■■■□□ 2.11
PHGDH-204ENST00000469443 PLA2R1Q13018 1463 aa28.18■■■□□ 2.1
PHGDH-204ENST00000469443 SPATA31D1Q6ZQQ2 1576 aa28.16■■■□□ 2.1
PHGDH-204ENST00000469443 PPARGC1BQ86YN6 1023 aaKnown RBP28.14■■■□□ 2.1
PHGDH-204ENST00000469443 NLRP1Q9C000 1473 aa28.13■■■□□ 2.09
PHGDH-204ENST00000469443 ERVK-7P63135 1459 aa28.11■■■□□ 2.09
PHGDH-204ENST00000469443 POLR1AO95602 1720 aaPredicted RBP28.1■■■□□ 2.09
PHGDH-204ENST00000469443 KANK1Q14678 1352 aa28.1■■■□□ 2.09
PHGDH-204ENST00000469443 FBXO41Q8TF61 875 aa28.09■■■□□ 2.09
PHGDH-204ENST00000469443 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.09■■■□□ 2.09
PHGDH-204ENST00000469443 NCKAP5LQ9HCH0 1330 aa28.09■■■□□ 2.09
PHGDH-204ENST00000469443 ARHGAP31Q2M1Z3 1444 aa28.09■■■□□ 2.09
PHGDH-204ENST00000469443 VWDEQ8N2E2 1590 aa28.08■■■□□ 2.09
PHGDH-204ENST00000469443 PKD2Q13563 968 aa28.08■■■□□ 2.09
PHGDH-204ENST00000469443 CERKQ8TCT0 537 aa28.06■■■□□ 2.08
PHGDH-204ENST00000469443 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.06■■■□□ 2.08
PHGDH-204ENST00000469443 ANKRD50Q9ULJ7 1429 aa28.06■■■□□ 2.08
PHGDH-204ENST00000469443 UGGT1Q9NYU2 1555 aa28.06■■■□□ 2.08
PHGDH-204ENST00000469443 LMTK2Q8IWU2 1503 aa28.05■■■□□ 2.08
PHGDH-204ENST00000469443 ROCK1Q13464 1354 aa28.01■■■□□ 2.07
PHGDH-204ENST00000469443 THEMISQ8N1K5 641 aaPredicted RBP28■■■□□ 2.07
PHGDH-204ENST00000469443 UBR1Q8IWV7 1749 aa27.99■■■□□ 2.07
PHGDH-204ENST00000469443 LTBP4Q8N2S1 1624 aa27.99■■■□□ 2.07
PHGDH-204ENST00000469443 NEURL4Q96JN8 1562 aa27.99■■■□□ 2.07
PHGDH-204ENST00000469443 EFCAB6Q5THR3 1501 aa27.97■■■□□ 2.07
PHGDH-204ENST00000469443 UNC13BO14795 1591 aa27.97■■■□□ 2.07
PHGDH-204ENST00000469443 RRBP1Q9P2E9 1410 aaKnown RBP27.94■■■□□ 2.06
PHGDH-204ENST00000469443 ITGAEP38570 1179 aa27.94■■■□□ 2.06
PHGDH-204ENST00000469443 TET3O43151 1660 aa27.94■■■□□ 2.06
PHGDH-204ENST00000469443 GCC2Q8IWJ2 1684 aa27.92■■■□□ 2.06
PHGDH-204ENST00000469443 ANKLE2Q86XL3 938 aa27.92■■■□□ 2.06
PHGDH-204ENST00000469443 PIK3C2BO00750 1634 aa27.91■■■□□ 2.06
PHGDH-204ENST00000469443 KDM5AP29375 1690 aaKnown RBP27.89■■■□□ 2.06
PHGDH-204ENST00000469443 SYNMO15061 1565 aa27.89■■■□□ 2.05
PHGDH-204ENST00000469443 MED14O60244 1454 aa27.88■■■□□ 2.05
PHGDH-204ENST00000469443 ZNF335Q9H4Z2 1342 aaPredicted RBP27.88■■■□□ 2.05
PHGDH-204ENST00000469443 RPRD2Q5VT52 1461 aaKnown RBP27.87■■■□□ 2.05
PHGDH-204ENST00000469443 IQGAP1P46940 1657 aa27.87■■■□□ 2.05
PHGDH-204ENST00000469443 NOS1P29475 1434 aa27.86■■■□□ 2.05
PHGDH-204ENST00000469443 IQGAP3Q86VI3 1631 aa27.86■■■□□ 2.05
PHGDH-204ENST00000469443 IQSEC2Q5JU85 1478 aa27.86■■■□□ 2.05
PHGDH-204ENST00000469443 NPHP4O75161 1426 aaPredicted RBP27.84■■■□□ 2.05
PHGDH-204ENST00000469443 SLIT1O75093 1534 aa27.83■■■□□ 2.05
PHGDH-204ENST00000469443 ARHGAP23Q9P227 1491 aa27.82■■■□□ 2.04
PHGDH-204ENST00000469443 E9PCH4 1651 aa27.81■■■□□ 2.04
PHGDH-204ENST00000469443 IDI1Q13907 227 aa27.79■■■□□ 2.04
PHGDH-204ENST00000469443 SCAF11Q99590 1463 aaKnown RBP27.78■■■□□ 2.04
PHGDH-204ENST00000469443 ADGRB3O60242 1522 aa27.77■■■□□ 2.04
PHGDH-204ENST00000469443 STAG3Q9UJ98 1225 aa27.76■■■□□ 2.03
PHGDH-204ENST00000469443 MYO5BQ9ULV0 1848 aa27.76■■■□□ 2.03
PHGDH-204ENST00000469443 SLC52A1Q9NWF4 448 aa27.75■■■□□ 2.03
PHGDH-204ENST00000469443 NUP155O75694 1391 aa27.74■■■□□ 2.03
PHGDH-204ENST00000469443 CPS1P31327 1500 aa27.73■■■□□ 2.03
PHGDH-204ENST00000469443 TMEM2Q9UHN6 1383 aa27.73■■■□□ 2.03
PHGDH-204ENST00000469443 LTKP29376 864 aa27.72■■■□□ 2.03
PHGDH-204ENST00000469443 TXNDC2Q86VQ3 553 aa27.72■■■□□ 2.03
PHGDH-204ENST00000469443 EID1Q9Y6B2 187 aa27.71■■■□□ 2.03
PHGDH-204ENST00000469443 NAIPQ13075 1403 aa27.7■■■□□ 2.03
PHGDH-204ENST00000469443 STRCP1A6NGW2 1772 aa27.69■■■□□ 2.02
PHGDH-204ENST00000469443 TMEM131LA2VDJ0 1609 aa27.67■■■□□ 2.02
PHGDH-204ENST00000469443 SPHKAPQ2M3C7 1700 aa27.64■■■□□ 2.02
PHGDH-204ENST00000469443 HFM1A2PYH4 1435 aa27.64■■■□□ 2.02
PHGDH-204ENST00000469443 UBAP1LF5GYI3 381 aa27.58■■■□□ 2.01
PHGDH-204ENST00000469443 ZFYVE9O95405 1425 aa27.57■■■□□ 2
PHGDH-204ENST00000469443 RIMS2Q9UQ26 1411 aa27.54■■■□□ 2
PHGDH-204ENST00000469443 LRRC7Q96NW7 1537 aa27.53■■■□□ 2
PHGDH-204ENST00000469443 CHGAP10645 457 aaKnown RBP27.53■■■□□ 2
PHGDH-204ENST00000469443 HDGFP51858 240 aaKnown RBP27.51■■□□□ 1.99
PHGDH-204ENST00000469443 XIRP1Q702N8 1843 aaKnown RBP27.51■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms