RNA–Protein interactions for RNA: ENST00000468948.1

ITGA4-205, Transcript of integrin subunit alpha 4, humanhuman

TSL 3

Gene ITGA4, Length 393 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-205ENST00000468948 SLAIN1Q8ND83 568 aa14.39□□□□□ -0.11
ITGA4-205ENST00000468948 TYW1BQ6NUM6 668 aa14.38□□□□□ -0.11
ITGA4-205ENST00000468948 PCDHGA4Q9Y5G9 962 aa14.38□□□□□ -0.11
ITGA4-205ENST00000468948 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.37□□□□□ -0.11
ITGA4-205ENST00000468948 CLCN1P35523 988 aa14.36□□□□□ -0.11
ITGA4-205ENST00000468948 FLIIQ13045 1269 aa14.36□□□□□ -0.11
ITGA4-205ENST00000468948 TSR1Q2NL82 804 aaKnown RBP14.36□□□□□ -0.11
ITGA4-205ENST00000468948 PCMTD1Q96MG8 357 aaPredicted RBP14.36□□□□□ -0.11
ITGA4-205ENST00000468948 MDM2Q00987 491 aaPredicted RBP14.34□□□□□ -0.11
ITGA4-205ENST00000468948 TMUB1Q9BVT8 246 aa14.34□□□□□ -0.11
ITGA4-205ENST00000468948 FBXW7Q969H0 707 aa14.33□□□□□ -0.12
ITGA4-205ENST00000468948 GPCPD1Q9NPB8 672 aa14.33□□□□□ -0.12
ITGA4-205ENST00000468948 POTEIP0CG38 1075 aa14.31□□□□□ -0.12
ITGA4-205ENST00000468948 JPH4Q96JJ6 628 aa14.31□□□□□ -0.12
ITGA4-205ENST00000468948 PHOX2BQ99453 314 aa14.31□□□□□ -0.12
ITGA4-205ENST00000468948 SSTR3P32745 418 aaPredicted RBP14.29□□□□□ -0.12
ITGA4-205ENST00000468948 SH3D19Q5HYK7 790 aa14.28□□□□□ -0.12
ITGA4-205ENST00000468948 KDM4FA0A1W2PPD8 638 aa14.27□□□□□ -0.13
ITGA4-205ENST00000468948 OATP04181 439 aa14.26□□□□□ -0.13
ITGA4-205ENST00000468948 FAM161AQ3B820 660 aa14.26□□□□□ -0.13
ITGA4-205ENST00000468948 FOSBP53539 338 aa14.25□□□□□ -0.13
ITGA4-205ENST00000468948 CERKQ8TCT0 537 aa14.25□□□□□ -0.13
ITGA4-205ENST00000468948 C6orf132Q5T0Z8 1188 aa14.24□□□□□ -0.13
ITGA4-205ENST00000468948 PADI6Q6TGC4 694 aa14.24□□□□□ -0.13
ITGA4-205ENST00000468948 ONECUT3O60422 494 aaPredicted RBP14.23□□□□□ -0.13
ITGA4-205ENST00000468948 METTL3Q86U44 580 aaKnown RBP14.23□□□□□ -0.13
ITGA4-205ENST00000468948 BEGAINQ9BUH8 593 aa14.23□□□□□ -0.13
ITGA4-205ENST00000468948 SKIV2LQ15477 1246 aaKnown RBP14.22□□□□□ -0.13
ITGA4-205ENST00000468948 ZNF454Q8N9F8 522 aa14.21□□□□□ -0.13
ITGA4-205ENST00000468948 ZDHHC16Q969W1 377 aa14.21□□□□□ -0.13
ITGA4-205ENST00000468948 FAM217BQ9NTX9 383 aaPredicted RBP14.21□□□□□ -0.13
ITGA4-205ENST00000468948 ATP1B4Q9UN42 357 aaPredicted RBP14.21□□□□□ -0.13
ITGA4-205ENST00000468948 NLRP7Q8WX94 980 aa14.2□□□□□ -0.14
ITGA4-205ENST00000468948 ADGRG1Q9Y653 693 aa14.2□□□□□ -0.14
ITGA4-205ENST00000468948 PXYLP1Q8TE99 480 aa14.19□□□□□ -0.14
ITGA4-205ENST00000468948 UBTFP17480 764 aaKnown RBP14.18□□□□□ -0.14
ITGA4-205ENST00000468948 ARID3AQ99856 593 aa14.18□□□□□ -0.14
ITGA4-205ENST00000468948 C1orf115Q9H7X2 142 aa14.17□□□□□ -0.14
ITGA4-205ENST00000468948 RBM27Q9P2N5 1060 aaKnown RBP14.16□□□□□ -0.14
ITGA4-205ENST00000468948 ARID3CA6NKF2 412 aa14.15□□□□□ -0.14
ITGA4-205ENST00000468948 NUDT7P0C024 238 aa14.15□□□□□ -0.14
ITGA4-205ENST00000468948 TTC13Q8NBP0 860 aa14.15□□□□□ -0.14
ITGA4-205ENST00000468948 POLR3EQ9NVU0 708 aa14.15□□□□□ -0.14
ITGA4-205ENST00000468948 APBB1O00213 710 aa14.14□□□□□ -0.15
ITGA4-205ENST00000468948 PROCA1Q8NCQ7 364 aaPredicted RBP14.14□□□□□ -0.15
ITGA4-205ENST00000468948 KHSRPQ92945 711 aaKnown RBP eCLIP14.14□□□□□ -0.15
ITGA4-205ENST00000468948 CLUAP1Q96AJ1 413 aa14.14□□□□□ -0.15
ITGA4-205ENST00000468948 ADAM33Q9BZ11 813 aa14.14□□□□□ -0.15
ITGA4-205ENST00000468948 A6NJR5 290 aa14.13□□□□□ -0.15
ITGA4-205ENST00000468948 DOK7Q18PE1 504 aa14.13□□□□□ -0.15
ITGA4-205ENST00000468948 ARSIQ5FYB1 569 aa14.13□□□□□ -0.15
ITGA4-205ENST00000468948 PRSS12P56730 875 aa14.12□□□□□ -0.15
ITGA4-205ENST00000468948 MCM6Q14566 821 aa14.11□□□□□ -0.15
ITGA4-205ENST00000468948 RBM46Q8TBY0 533 aaKnown RBP14.11□□□□□ -0.15
ITGA4-205ENST00000468948 POTEHQ6S545 545 aa14.1□□□□□ -0.15
ITGA4-205ENST00000468948 CDCA7LQ96GN5 454 aa14.1□□□□□ -0.15
ITGA4-205ENST00000468948 MYSM1Q5VVJ2 828 aa14.09□□□□□ -0.15
ITGA4-205ENST00000468948 RIMBP2O15034 1052 aa14.08□□□□□ -0.16
ITGA4-205ENST00000468948 TRAK2O60296 914 aa14.07□□□□□ -0.16
ITGA4-205ENST00000468948 HOXB3P14651 431 aaPredicted RBP14.07□□□□□ -0.16
ITGA4-205ENST00000468948 ZSWIM6Q9HCJ5 1215 aa14.06□□□□□ -0.16
ITGA4-205ENST00000468948 CLK2P49760 499 aaKnown RBP14.05□□□□□ -0.16
ITGA4-205ENST00000468948 DIXDC1Q155Q3 683 aa14.05□□□□□ -0.16
ITGA4-205ENST00000468948 GPR153Q6NV75 609 aa14.05□□□□□ -0.16
ITGA4-205ENST00000468948 SP7Q8TDD2 431 aaPredicted RBP14.05□□□□□ -0.16
ITGA4-205ENST00000468948 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.05□□□□□ -0.16
ITGA4-205ENST00000468948 TBC1D2Q9BYX2 928 aa14.05□□□□□ -0.16
ITGA4-205ENST00000468948 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.02□□□□□ -0.17
ITGA4-205ENST00000468948 ZNF710Q8N1W2 664 aa14.01□□□□□ -0.17
ITGA4-205ENST00000468948 FAM198AQ9UFP1 575 aa14.01□□□□□ -0.17
ITGA4-205ENST00000468948 LHX6Q9UPM6 363 aa14.01□□□□□ -0.17
ITGA4-205ENST00000468948 RCCD1A6NED2 376 aa14□□□□□ -0.17
ITGA4-205ENST00000468948 COL9A1P20849 921 aa14□□□□□ -0.17
ITGA4-205ENST00000468948 PPP4R3BQ5MIZ7 849 aa14□□□□□ -0.17
ITGA4-205ENST00000468948 POTEJP0CG39 1038 aa13.99□□□□□ -0.17
ITGA4-205ENST00000468948 RAD21O60216 631 aa13.98□□□□□ -0.17
ITGA4-205ENST00000468948 EYA1Q99502 592 aa13.98□□□□□ -0.17
ITGA4-205ENST00000468948 PROSER2Q86WR7 435 aaPredicted RBP13.97□□□□□ -0.17
ITGA4-205ENST00000468948 POM121Q96HA1 1249 aa13.97□□□□□ -0.17
ITGA4-205ENST00000468948 BCL2L12Q9HB09 334 aa13.97□□□□□ -0.17
ITGA4-205ENST00000468948 PSDA5PKW4 1024 aaPredicted RBP13.96□□□□□ -0.17
ITGA4-205ENST00000468948 SPDYE5A6NIY4 337 aa13.96□□□□□ -0.17
ITGA4-205ENST00000468948 RFC5P40937 340 aa13.96□□□□□ -0.17
ITGA4-205ENST00000468948 SPIRE2Q8WWL2 714 aa13.96□□□□□ -0.17
ITGA4-205ENST00000468948 RIC3Q7Z5B4 369 aa13.95□□□□□ -0.18
ITGA4-205ENST00000468948 LIMD1Q9UGP4 676 aa13.95□□□□□ -0.18
ITGA4-205ENST00000468948 TSKSQ9UJT2 592 aa13.95□□□□□ -0.18
ITGA4-205ENST00000468948 PPP1R3GB7ZBB8 358 aa13.94□□□□□ -0.18
ITGA4-205ENST00000468948 CD46P15529 392 aa13.94□□□□□ -0.18
ITGA4-205ENST00000468948 PTPREP23469 700 aa13.94□□□□□ -0.18
ITGA4-205ENST00000468948 NUDT18Q6ZVK8 323 aa13.94□□□□□ -0.18
ITGA4-205ENST00000468948 CCDC82Q8N4S0 544 aa13.94□□□□□ -0.18
ITGA4-205ENST00000468948 BANK1Q8NDB2 785 aa13.94□□□□□ -0.18
ITGA4-205ENST00000468948 SULF1Q8IWU6 871 aa13.93□□□□□ -0.18
ITGA4-205ENST00000468948 ZNF777Q9ULD5 760 aaPredicted RBP13.93□□□□□ -0.18
ITGA4-205ENST00000468948 NUTM1Q86Y26 1132 aa13.92□□□□□ -0.18
ITGA4-205ENST00000468948 DDX11L8A8MPP1 907 aa13.91□□□□□ -0.18
ITGA4-205ENST00000468948 DNAJB2P25686 324 aa13.91□□□□□ -0.18
ITGA4-205ENST00000468948 TMEM259Q4ZIN3 620 aa13.91□□□□□ -0.18
ITGA4-205ENST00000468948 SCUBE2Q9NQ36 999 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms